RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 AEBP2Q6ZN18 517 aaPredicted RBP27.85■■■□□ 2.05
PRKCA-205ENST00000583775 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
PRKCA-205ENST00000583775 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
PRKCA-205ENST00000583775 PHF23Q9BUL5 403 aaPredicted RBP23.38■■□□□ 1.33
PRKCA-205ENST00000583775 FOXD1Q16676 465 aa22.18■■□□□ 1.14
PRKCA-205ENST00000583775 POTEDQ86YR6 584 aa20.85■□□□□ 0.93
PRKCA-205ENST00000583775 MSH5O43196 834 aa20.8■□□□□ 0.92
PRKCA-205ENST00000583775 PLPPR3Q6T4P5 718 aa20.67■□□□□ 0.9
PRKCA-205ENST00000583775 PPP6R1Q9UPN7 881 aa20.56■□□□□ 0.88
PRKCA-205ENST00000583775 PIAS4Q8N2W9 510 aaPredicted RBP20.55■□□□□ 0.88
PRKCA-205ENST00000583775 ADRA2BP18089 450 aa20.4■□□□□ 0.86
PRKCA-205ENST00000583775 MAPK8IP2Q13387 824 aaPredicted RBP18.85■□□□□ 0.61
PRKCA-205ENST00000583775 DMRT2Q9Y5R5 561 aa18.79■□□□□ 0.6
PRKCA-205ENST00000583775 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
PRKCA-205ENST00000583775 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
PRKCA-205ENST00000583775 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
PRKCA-205ENST00000583775 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
PRKCA-205ENST00000583775 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
PRKCA-205ENST00000583775 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
PRKCA-205ENST00000583775 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
PRKCA-205ENST00000583775 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
PRKCA-205ENST00000583775 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
PRKCA-205ENST00000583775 C1QBPQ07021 282 aaKnown RBP17.48■□□□□ 0.39
PRKCA-205ENST00000583775 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
PRKCA-205ENST00000583775 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
PRKCA-205ENST00000583775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.315e-7■■□□□ 11.7
PRKCA-205ENST00000583775 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
PRKCA-205ENST00000583775 SPINK5Q9NQ38 1064 aaPredicted RBP16.56■□□□□ 0.24
PRKCA-205ENST00000583775 DSG3P32926 999 aa16.55■□□□□ 0.24
PRKCA-205ENST00000583775 KCNA4P22459 653 aa16.49■□□□□ 0.23
PRKCA-205ENST00000583775 SLC4A2P04920 1241 aa16.45■□□□□ 0.22
PRKCA-205ENST00000583775 CAPN15O75808 1086 aa16.43■□□□□ 0.22
PRKCA-205ENST00000583775 POTEHQ6S545 545 aa16.25■□□□□ 0.19
PRKCA-205ENST00000583775 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
PRKCA-205ENST00000583775 ZNF219Q9P2Y4 722 aaPredicted RBP16.11■□□□□ 0.17
PRKCA-205ENST00000583775 APLP2Q06481 763 aa16.09■□□□□ 0.17
PRKCA-205ENST00000583775 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
PRKCA-205ENST00000583775 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
PRKCA-205ENST00000583775 ABCB7O75027 752 aa16.05■□□□□ 0.16
PRKCA-205ENST00000583775 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
PRKCA-205ENST00000583775 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
PRKCA-205ENST00000583775 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
PRKCA-205ENST00000583775 POLA2Q14181 598 aa15.68■□□□□ 0.1
PRKCA-205ENST00000583775 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
PRKCA-205ENST00000583775 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
PRKCA-205ENST00000583775 SLC4A1APQ9BWU0 796 aaKnown RBP15.44■□□□□ 0.06
PRKCA-205ENST00000583775 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
PRKCA-205ENST00000583775 AKT1S1Q96B36 256 aa15.33■□□□□ 0.04
PRKCA-205ENST00000583775 ZBTB12Q9Y330 459 aaPredicted RBP15.29■□□□□ 0.04
PRKCA-205ENST00000583775 ZBTB22O15209 634 aa15.22■□□□□ 0.03
PRKCA-205ENST00000583775 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
PRKCA-205ENST00000583775 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
PRKCA-205ENST00000583775 PIP4P2Q8N4L2 257 aa15.11■□□□□ 0.01
PRKCA-205ENST00000583775 SP7Q8TDD2 431 aaPredicted RBP15.09■□□□□ 0.01
PRKCA-205ENST00000583775 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
PRKCA-205ENST00000583775 PITPNM1O00562 1244 aa15.03■□□□□ -0
PRKCA-205ENST00000583775 FXR2P51116 673 aaKnown RBP eCLIP15.02■□□□□ -0
PRKCA-205ENST00000583775 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
PRKCA-205ENST00000583775 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
PRKCA-205ENST00000583775 SPDYE2Q495Y8 402 aa14.85□□□□□ -0.03
PRKCA-205ENST00000583775 HAX1O00165 279 aa14.82□□□□□ -0.04
PRKCA-205ENST00000583775 MKRN4PQ13434 485 aaPredicted RBP14.79□□□□□ -0.04
PRKCA-205ENST00000583775 EVX2Q03828 476 aa14.77□□□□□ -0.05
PRKCA-205ENST00000583775 FBLN2P98095 1184 aa14.76□□□□□ -0.05
PRKCA-205ENST00000583775 SSUH2Q9Y2M2 353 aa14.69□□□□□ -0.06
PRKCA-205ENST00000583775 SPDYE1Q8NFV5 336 aaPredicted RBP14.63□□□□□ -0.07
PRKCA-205ENST00000583775 PRKAR2AP13861 404 aaKnown RBP14.6□□□□□ -0.07
PRKCA-205ENST00000583775 ZNF692Q9BU19 519 aaPredicted RBP14.58□□□□□ -0.08
PRKCA-205ENST00000583775 C19orf67A6NJJ6 358 aa14.54□□□□□ -0.08
PRKCA-205ENST00000583775 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
PRKCA-205ENST00000583775 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
PRKCA-205ENST00000583775 CHADLQ6NUI6 762 aa14.37□□□□□ -0.11
PRKCA-205ENST00000583775 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
PRKCA-205ENST00000583775 GABBR2O75899 941 aa14.36□□□□□ -0.11
PRKCA-205ENST00000583775 PRR29P0C7W0 189 aa14.31□□□□□ -0.12
PRKCA-205ENST00000583775 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
PRKCA-205ENST00000583775 FARP1Q9Y4F1 1045 aaPredicted RBP14.17□□□□□ -0.14
PRKCA-205ENST00000583775 LHX8Q68G74 356 aa14.14□□□□□ -0.15
PRKCA-205ENST00000583775 POTEIP0CG38 1075 aa14.13□□□□□ -0.15
PRKCA-205ENST00000583775 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
PRKCA-205ENST00000583775 CLCN6P51797 869 aa14.03□□□□□ -0.16
PRKCA-205ENST00000583775 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
PRKCA-205ENST00000583775 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
PRKCA-205ENST00000583775 STAG3Q9UJ98 1225 aa13.9□□□□□ -0.18
PRKCA-205ENST00000583775 ZRANB1Q9UGI0 708 aa13.85□□□□□ -0.19
PRKCA-205ENST00000583775 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
PRKCA-205ENST00000583775 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
PRKCA-205ENST00000583775 GALR2O43603 387 aaPredicted RBP13.78□□□□□ -0.2
PRKCA-205ENST00000583775 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
PRKCA-205ENST00000583775 PHF12Q96QT6 1004 aa13.66□□□□□ -0.22
PRKCA-205ENST00000583775 POTEB2H3BUK9 544 aa13.65□□□□□ -0.22
PRKCA-205ENST00000583775 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
PRKCA-205ENST00000583775 PROM2Q8N271 834 aa13.62□□□□□ -0.23
PRKCA-205ENST00000583775 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
PRKCA-205ENST00000583775 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
PRKCA-205ENST00000583775 PELP1Q8IZL8 1130 aaKnown RBP13.59□□□□□ -0.23
PRKCA-205ENST00000583775 ASTLQ6HA08 431 aaPredicted RBP13.51□□□□□ -0.25
PRKCA-205ENST00000583775 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
PRKCA-205ENST00000583775 ATMINO43313 823 aaPredicted RBP13.46□□□□□ -0.25
PRKCA-205ENST00000583775 NISCHQ9Y2I1 1504 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms