RNA–Protein interactions for RNA: ENST00000583224.2

AC004147.2-201, humanhuman

TSL 5 BASIC

Gene AC004147.2, Length 3,753 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004147.2-201ENST00000583224 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
AC004147.2-201ENST00000583224 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
AC004147.2-201ENST00000583224 SUPT5HO00267 1087 aaKnown RBP18.02■□□□□ 0.47
AC004147.2-201ENST00000583224 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
AC004147.2-201ENST00000583224 PCGF6Q9BYE7 350 aa17.14■□□□□ 0.33
AC004147.2-201ENST00000583224 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
AC004147.2-201ENST00000583224 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
AC004147.2-201ENST00000583224 LOC105371045A0A1W2PR82 267 aa16.83■□□□□ 0.29
AC004147.2-201ENST00000583224 HRCP23327 699 aa16.83■□□□□ 0.29
AC004147.2-201ENST00000583224 FAM9AQ8IZU1 332 aaPredicted RBP16.8■□□□□ 0.28
AC004147.2-201ENST00000583224 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
AC004147.2-201ENST00000583224 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
AC004147.2-201ENST00000583224 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
AC004147.2-201ENST00000583224 MYO15BQ96JP2 1530 aa16.58■□□□□ 0.24
AC004147.2-201ENST00000583224 TRIM26Q12899 539 aaPredicted RBP16.47■□□□□ 0.23
AC004147.2-201ENST00000583224 TTBK1Q5TCY1 1321 aaPredicted RBP16.4■□□□□ 0.22
AC004147.2-201ENST00000583224 CCDC180Q9P1Z9 1646 aa16.35■□□□□ 0.21
AC004147.2-201ENST00000583224 ZEB1P37275 1124 aaPredicted RBP16.25■□□□□ 0.19
AC004147.2-201ENST00000583224 CCER1Q8TC90 406 aaPredicted RBP16.16■□□□□ 0.18
AC004147.2-201ENST00000583224 DCAF1Q9Y4B6 1507 aa16.12■□□□□ 0.17
AC004147.2-201ENST00000583224 ABCC9O60706 1549 aa16.04■□□□□ 0.16
AC004147.2-201ENST00000583224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
AC004147.2-201ENST00000583224 SCRIBQ14160 1630 aa16.02■□□□□ 0.16
AC004147.2-201ENST00000583224 UBTFP17480 764 aaKnown RBP16■□□□□ 0.15
AC004147.2-201ENST00000583224 RANGAP1P46060 587 aaPredicted RBP15.99■□□□□ 0.15
AC004147.2-201ENST00000583224 RSF1Q96T23 1441 aaPredicted RBP15.96■□□□□ 0.14
AC004147.2-201ENST00000583224 APLP2Q06481 763 aa15.84■□□□□ 0.13
AC004147.2-201ENST00000583224 YTHDC1Q96MU7 727 aaKnown RBP15.78■□□□□ 0.12
AC004147.2-201ENST00000583224 CENPBP07199 599 aaPredicted RBP15.78■□□□□ 0.12
AC004147.2-201ENST00000583224 HNRNPUL2Q1KMD3 747 aaKnown RBP15.74■□□□□ 0.11
AC004147.2-201ENST00000583224 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
AC004147.2-201ENST00000583224 DIEXFQ68CQ4 756 aaKnown RBP15.72■□□□□ 0.11
AC004147.2-201ENST00000583224 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
AC004147.2-201ENST00000583224 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
AC004147.2-201ENST00000583224 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
AC004147.2-201ENST00000583224 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
AC004147.2-201ENST00000583224 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
AC004147.2-201ENST00000583224 GTF3C3Q9Y5Q9 886 aa15.56■□□□□ 0.08
AC004147.2-201ENST00000583224 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
AC004147.2-201ENST00000583224 ACIN1Q9UKV3 1341 aaKnown RBP15.53■□□□□ 0.08
AC004147.2-201ENST00000583224 NEUROD1Q13562 356 aa15.52■□□□□ 0.07
AC004147.2-201ENST00000583224 ITGAEP38570 1179 aa15.47■□□□□ 0.07
AC004147.2-201ENST00000583224 ZNF316A6NFI3 1004 aaPredicted RBP15.44■□□□□ 0.06
AC004147.2-201ENST00000583224 NACADO15069 1562 aa15.42■□□□□ 0.06
AC004147.2-201ENST00000583224 ATP1B4Q9UN42 357 aaPredicted RBP15.41■□□□□ 0.06
AC004147.2-201ENST00000583224 WIZO95785 1651 aa15.39■□□□□ 0.05
AC004147.2-201ENST00000583224 CEP162Q5TB80 1403 aa15.39■□□□□ 0.05
AC004147.2-201ENST00000583224 SOGA1O94964 1423 aa15.36■□□□□ 0.05
AC004147.2-201ENST00000583224 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
AC004147.2-201ENST00000583224 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.05
AC004147.2-201ENST00000583224 BAZ1AQ9NRL2 1556 aaPredicted RBP15.28■□□□□ 0.04
AC004147.2-201ENST00000583224 TNIKQ9UKE5 1360 aa15.26■□□□□ 0.03
AC004147.2-201ENST00000583224 MIER1Q8N108 512 aa15.26■□□□□ 0.03
AC004147.2-201ENST00000583224 CLIP1P30622 1438 aa15.19■□□□□ 0.02
AC004147.2-201ENST00000583224 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
AC004147.2-201ENST00000583224 RUSC2Q8N2Y8 1516 aa15.18■□□□□ 0.02
AC004147.2-201ENST00000583224 GOLGA3Q08378 1498 aa15.17■□□□□ 0.02
AC004147.2-201ENST00000583224 EEA1Q15075 1411 aa15.14■□□□□ 0.01
AC004147.2-201ENST00000583224 FAM50AQ14320 339 aaKnown RBP15.1■□□□□ 0.01
AC004147.2-201ENST00000583224 TOP2AP11388 1531 aaKnown RBP15.08■□□□□ 0
AC004147.2-201ENST00000583224 P3H3Q8IVL6 736 aa15.07■□□□□ 0
AC004147.2-201ENST00000583224 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
AC004147.2-201ENST00000583224 BCANQ96GW7 911 aa15□□□□□ -0.01
AC004147.2-201ENST00000583224 SMARCA4P51532 1647 aa15□□□□□ -0.01
AC004147.2-201ENST00000583224 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
AC004147.2-201ENST00000583224 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.01
AC004147.2-201ENST00000583224 NEFLP07196 543 aa14.96□□□□□ -0.02
AC004147.2-201ENST00000583224 KANK4Q5T7N3 995 aaPredicted RBP14.95□□□□□ -0.02
AC004147.2-201ENST00000583224 MYT1Q01538 1121 aa14.95□□□□□ -0.02
AC004147.2-201ENST00000583224 VPS8Q8N3P4 1428 aa14.93□□□□□ -0.02
AC004147.2-201ENST00000583224 RAPGEF2Q9Y4G8 1499 aa14.9□□□□□ -0.02
AC004147.2-201ENST00000583224 DDX10Q13206 875 aaKnown RBP14.9□□□□□ -0.02
AC004147.2-201ENST00000583224 HIRIP3Q9BW71 556 aaPredicted RBP14.9□□□□□ -0.02
AC004147.2-201ENST00000583224 CNGB1Q14028 1251 aaPredicted RBP14.83□□□□□ -0.04
AC004147.2-201ENST00000583224 SIN3AQ96ST3 1273 aa14.8□□□□□ -0.04
AC004147.2-201ENST00000583224 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
AC004147.2-201ENST00000583224 KIF27Q86VH2 1401 aa14.78□□□□□ -0.04
AC004147.2-201ENST00000583224 ANP32CO43423 234 aa14.77□□□□□ -0.05
AC004147.2-201ENST00000583224 FKBP8Q14318 412 aa14.77□□□□□ -0.05
AC004147.2-201ENST00000583224 TRIM52Q96A61 297 aa14.77□□□□□ -0.05
AC004147.2-201ENST00000583224 ARID3CA6NKF2 412 aa14.76□□□□□ -0.05
AC004147.2-201ENST00000583224 CCNB3Q8WWL7 1395 aa14.75□□□□□ -0.05
AC004147.2-201ENST00000583224 CLSPNQ9HAW4 1339 aa14.74□□□□□ -0.05
AC004147.2-201ENST00000583224 SUPT16HQ9Y5B9 1047 aaKnown RBP14.73□□□□□ -0.05
AC004147.2-201ENST00000583224 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
AC004147.2-201ENST00000583224 DHX57Q6P158 1386 aaKnown RBP14.73□□□□□ -0.05
AC004147.2-201ENST00000583224 POLR3GLQ9BT43 218 aa14.73□□□□□ -0.05
AC004147.2-201ENST00000583224 KCNH8Q96L42 1107 aa14.71□□□□□ -0.05
AC004147.2-201ENST00000583224 EIF4G1Q04637 1599 aaKnown RBP14.69□□□□□ -0.06
AC004147.2-201ENST00000583224 ERICH6Q7L0X2 663 aa14.68□□□□□ -0.06
AC004147.2-201ENST00000583224 KIF21BO75037 1637 aa14.67□□□□□ -0.06
AC004147.2-201ENST00000583224 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
AC004147.2-201ENST00000583224 TONSLQ96HA7 1378 aa14.64□□□□□ -0.07
AC004147.2-201ENST00000583224 CUX2O14529 1486 aa14.64□□□□□ -0.07
AC004147.2-201ENST00000583224 RAB3GAP2Q9H2M9 1393 aa14.64□□□□□ -0.07
AC004147.2-201ENST00000583224 CARMIL1Q5VZK9 1371 aa14.62□□□□□ -0.07
AC004147.2-201ENST00000583224 HNRNPUQ00839 825 aaKnown RBP eCLIP14.59□□□□□ -0.07
AC004147.2-201ENST00000583224 IRX6P78412 446 aaPredicted RBP14.57□□□□□ -0.08
AC004147.2-201ENST00000583224 MTUS2Q5JR59 1369 aa14.57□□□□□ -0.08
AC004147.2-201ENST00000583224 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms