RNA–Protein interactions for RNA: ENST00000581352.1

MIR548S-201, Transcript of microRNA 548s, humanhuman

BASIC

Gene MIR548S, Length 82 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548S-201ENST00000581352 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
MIR548S-201ENST00000581352 CHIC1Q5VXU3 224 aa25.64■■□□□ 1.7
MIR548S-201ENST00000581352 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
MIR548S-201ENST00000581352 PHF23Q9BUL5 403 aaPredicted RBP22.75■■□□□ 1.23
MIR548S-201ENST00000581352 FOXD1Q16676 465 aa21.5■■□□□ 1.03
MIR548S-201ENST00000581352 PLPPR3Q6T4P5 718 aa20.46■□□□□ 0.87
MIR548S-201ENST00000581352 MSH5O43196 834 aa20.15■□□□□ 0.82
MIR548S-201ENST00000581352 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
MIR548S-201ENST00000581352 PPP6R1Q9UPN7 881 aa20.07■□□□□ 0.8
MIR548S-201ENST00000581352 ADRA2BP18089 450 aa19.99■□□□□ 0.79
MIR548S-201ENST00000581352 POTEDQ86YR6 584 aa19.73■□□□□ 0.75
MIR548S-201ENST00000581352 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
MIR548S-201ENST00000581352 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
MIR548S-201ENST00000581352 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
MIR548S-201ENST00000581352 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
MIR548S-201ENST00000581352 HOXD11P31277 338 aaPredicted RBP17.61■□□□□ 0.41
MIR548S-201ENST00000581352 CNKSR2Q8WXI2 1034 aa17.6■□□□□ 0.41
MIR548S-201ENST00000581352 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
MIR548S-201ENST00000581352 RNF216Q9NWF9 866 aaPredicted RBP17.46■□□□□ 0.39
MIR548S-201ENST00000581352 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
MIR548S-201ENST00000581352 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
MIR548S-201ENST00000581352 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
MIR548S-201ENST00000581352 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
MIR548S-201ENST00000581352 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
MIR548S-201ENST00000581352 C1QBPQ07021 282 aaKnown RBP16.94■□□□□ 0.3
MIR548S-201ENST00000581352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.27
MIR548S-201ENST00000581352 KCNA4P22459 653 aa16.6■□□□□ 0.25
MIR548S-201ENST00000581352 U3KPZ7 1027 aaPredicted RBP16.41■□□□□ 0.22
MIR548S-201ENST00000581352 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
MIR548S-201ENST00000581352 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
MIR548S-201ENST00000581352 CAPN15O75808 1086 aa16.13■□□□□ 0.17
MIR548S-201ENST00000581352 DSG3P32926 999 aa16.08■□□□□ 0.16
MIR548S-201ENST00000581352 APLP2Q06481 763 aa15.95■□□□□ 0.14
MIR548S-201ENST00000581352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
MIR548S-201ENST00000581352 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
MIR548S-201ENST00000581352 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
MIR548S-201ENST00000581352 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
MIR548S-201ENST00000581352 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
MIR548S-201ENST00000581352 ABCB7O75027 752 aa15.75■□□□□ 0.11
MIR548S-201ENST00000581352 MYCNP04198 464 aaPredicted RBP15.71■□□□□ 0.11
MIR548S-201ENST00000581352 SLC4A1APQ9BWU0 796 aaKnown RBP15.66■□□□□ 0.1
MIR548S-201ENST00000581352 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
MIR548S-201ENST00000581352 POTEHQ6S545 545 aa15.45■□□□□ 0.06
MIR548S-201ENST00000581352 POLA2Q14181 598 aa15.43■□□□□ 0.06
MIR548S-201ENST00000581352 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
MIR548S-201ENST00000581352 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
MIR548S-201ENST00000581352 ZBTB22O15209 634 aa15.28■□□□□ 0.04
MIR548S-201ENST00000581352 ZBTB12Q9Y330 459 aaPredicted RBP15.15■□□□□ 0.02
MIR548S-201ENST00000581352 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
MIR548S-201ENST00000581352 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
MIR548S-201ENST00000581352 AKT1S1Q96B36 256 aa14.98□□□□□ -0.01
MIR548S-201ENST00000581352 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
MIR548S-201ENST00000581352 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
MIR548S-201ENST00000581352 FBLN2P98095 1184 aa14.74□□□□□ -0.05
MIR548S-201ENST00000581352 SPDYE2BA6NHP3 402 aa14.68□□□□□ -0.06
MIR548S-201ENST00000581352 PITPNM1O00562 1244 aa14.68□□□□□ -0.06
MIR548S-201ENST00000581352 SPDYE6P0CI01 402 aa14.68□□□□□ -0.06
MIR548S-201ENST00000581352 SPDYE2Q495Y8 402 aa14.68□□□□□ -0.06
MIR548S-201ENST00000581352 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
MIR548S-201ENST00000581352 MKRN4PQ13434 485 aaPredicted RBP14.64□□□□□ -0.07
MIR548S-201ENST00000581352 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
MIR548S-201ENST00000581352 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.09
MIR548S-201ENST00000581352 SSUH2Q9Y2M2 353 aa14.48□□□□□ -0.09
MIR548S-201ENST00000581352 SP7Q8TDD2 431 aaPredicted RBP14.47□□□□□ -0.09
MIR548S-201ENST00000581352 ZNF692Q9BU19 519 aaPredicted RBP14.46□□□□□ -0.09
MIR548S-201ENST00000581352 SPDYE1Q8NFV5 336 aaPredicted RBP14.42□□□□□ -0.1
MIR548S-201ENST00000581352 HAX1O00165 279 aa14.37□□□□□ -0.11
MIR548S-201ENST00000581352 CLEC11AQ9Y240 323 aa14.36□□□□□ -0.11
MIR548S-201ENST00000581352 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
MIR548S-201ENST00000581352 EHMT2Q96KQ7 1210 aa14.27□□□□□ -0.13
MIR548S-201ENST00000581352 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
MIR548S-201ENST00000581352 EVX2Q03828 476 aa14.2□□□□□ -0.14
MIR548S-201ENST00000581352 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
MIR548S-201ENST00000581352 C19orf67A6NJJ6 358 aa14.11□□□□□ -0.15
MIR548S-201ENST00000581352 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
MIR548S-201ENST00000581352 SPDYE4A6NLX3 237 aa13.91□□□□□ -0.18
MIR548S-201ENST00000581352 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
MIR548S-201ENST00000581352 GABBR2O75899 941 aa13.89□□□□□ -0.19
MIR548S-201ENST00000581352 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
MIR548S-201ENST00000581352 CD44P16070 742 aaKnown RBP13.83□□□□□ -0.2
MIR548S-201ENST00000581352 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
MIR548S-201ENST00000581352 CLCN6P51797 869 aa13.69□□□□□ -0.22
MIR548S-201ENST00000581352 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
MIR548S-201ENST00000581352 PROM2Q8N271 834 aa13.62□□□□□ -0.23
MIR548S-201ENST00000581352 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
MIR548S-201ENST00000581352 POTEIP0CG38 1075 aa13.6□□□□□ -0.23
MIR548S-201ENST00000581352 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
MIR548S-201ENST00000581352 LHX8Q68G74 356 aa13.56□□□□□ -0.24
MIR548S-201ENST00000581352 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
MIR548S-201ENST00000581352 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
MIR548S-201ENST00000581352 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
MIR548S-201ENST00000581352 GALR2O43603 387 aaPredicted RBP13.46□□□□□ -0.25
MIR548S-201ENST00000581352 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
MIR548S-201ENST00000581352 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
MIR548S-201ENST00000581352 MIER1Q8N108 512 aa13.26□□□□□ -0.29
MIR548S-201ENST00000581352 MS4A3Q96HJ5 214 aa13.26□□□□□ -0.29
MIR548S-201ENST00000581352 TSPYL2Q9H2G4 693 aaPredicted RBP13.26□□□□□ -0.29
MIR548S-201ENST00000581352 CCDC61Q9Y6R9 512 aa13.25□□□□□ -0.29
MIR548S-201ENST00000581352 ASTLQ6HA08 431 aaPredicted RBP13.2□□□□□ -0.3
MIR548S-201ENST00000581352 PELP1Q8IZL8 1130 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms