RNA–Protein interactions for RNA: ENST00000580258.1

AP006219.1-201, humanhuman

TSL 3 BASIC

Gene AP006219.1, Length 472 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP006219.1-201ENST00000580258 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
AP006219.1-201ENST00000580258 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
AP006219.1-201ENST00000580258 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
AP006219.1-201ENST00000580258 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
AP006219.1-201ENST00000580258 FOXD1Q16676 465 aa19.89■□□□□ 0.77
AP006219.1-201ENST00000580258 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
AP006219.1-201ENST00000580258 MSH5O43196 834 aa18.61■□□□□ 0.57
AP006219.1-201ENST00000580258 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
AP006219.1-201ENST00000580258 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
AP006219.1-201ENST00000580258 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
AP006219.1-201ENST00000580258 ADRA2BP18089 450 aa18.35■□□□□ 0.53
AP006219.1-201ENST00000580258 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
AP006219.1-201ENST00000580258 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
AP006219.1-201ENST00000580258 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
AP006219.1-201ENST00000580258 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
AP006219.1-201ENST00000580258 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
AP006219.1-201ENST00000580258 HOXD11P31277 338 aaPredicted RBP16.12■□□□□ 0.17
AP006219.1-201ENST00000580258 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
AP006219.1-201ENST00000580258 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
AP006219.1-201ENST00000580258 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
AP006219.1-201ENST00000580258 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
AP006219.1-201ENST00000580258 C1QBPQ07021 282 aaKnown RBP15.62■□□□□ 0.09
AP006219.1-201ENST00000580258 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
AP006219.1-201ENST00000580258 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
AP006219.1-201ENST00000580258 NPM3O75607 178 aaKnown RBP15.37■□□□□ 0.05
AP006219.1-201ENST00000580258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.04
AP006219.1-201ENST00000580258 U3KPZ7 1027 aaPredicted RBP15.04■□□□□ -0
AP006219.1-201ENST00000580258 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
AP006219.1-201ENST00000580258 KCNA4P22459 653 aa14.87□□□□□ -0.03
AP006219.1-201ENST00000580258 DSG3P32926 999 aa14.83□□□□□ -0.04
AP006219.1-201ENST00000580258 CAPN15O75808 1086 aa14.82□□□□□ -0.04
AP006219.1-201ENST00000580258 SLC4A2P04920 1241 aa14.77□□□□□ -0.05
AP006219.1-201ENST00000580258 POTEHQ6S545 545 aa14.54□□□□□ -0.08
AP006219.1-201ENST00000580258 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
AP006219.1-201ENST00000580258 ABCB7O75027 752 aa14.5□□□□□ -0.09
AP006219.1-201ENST00000580258 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
AP006219.1-201ENST00000580258 APLP2Q06481 763 aa14.43□□□□□ -0.1
AP006219.1-201ENST00000580258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.39□□□□□ -0.11
AP006219.1-201ENST00000580258 HNRNPUL2Q1KMD3 747 aaKnown RBP14.39□□□□□ -0.11
AP006219.1-201ENST00000580258 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
AP006219.1-201ENST00000580258 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
AP006219.1-201ENST00000580258 POLA2Q14181 598 aa14.09□□□□□ -0.15
AP006219.1-201ENST00000580258 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
AP006219.1-201ENST00000580258 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
AP006219.1-201ENST00000580258 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
AP006219.1-201ENST00000580258 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
AP006219.1-201ENST00000580258 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
AP006219.1-201ENST00000580258 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
AP006219.1-201ENST00000580258 ZBTB22O15209 634 aa13.72□□□□□ -0.21
AP006219.1-201ENST00000580258 ZBTB12Q9Y330 459 aaPredicted RBP13.71□□□□□ -0.21
AP006219.1-201ENST00000580258 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
AP006219.1-201ENST00000580258 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
AP006219.1-201ENST00000580258 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
AP006219.1-201ENST00000580258 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
AP006219.1-201ENST00000580258 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
AP006219.1-201ENST00000580258 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
AP006219.1-201ENST00000580258 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
AP006219.1-201ENST00000580258 HAX1O00165 279 aa13.33□□□□□ -0.28
AP006219.1-201ENST00000580258 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
AP006219.1-201ENST00000580258 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
AP006219.1-201ENST00000580258 SPDYE2Q495Y8 402 aa13.32□□□□□ -0.28
AP006219.1-201ENST00000580258 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
AP006219.1-201ENST00000580258 FBLN2P98095 1184 aa13.29□□□□□ -0.28
AP006219.1-201ENST00000580258 EVX2Q03828 476 aa13.26□□□□□ -0.29
AP006219.1-201ENST00000580258 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
AP006219.1-201ENST00000580258 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
AP006219.1-201ENST00000580258 PRKAR2AP13861 404 aaKnown RBP13.13□□□□□ -0.31
AP006219.1-201ENST00000580258 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
AP006219.1-201ENST00000580258 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
AP006219.1-201ENST00000580258 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
AP006219.1-201ENST00000580258 CHADLQ6NUI6 762 aa12.98□□□□□ -0.33
AP006219.1-201ENST00000580258 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
AP006219.1-201ENST00000580258 GABBR2O75899 941 aa12.88□□□□□ -0.35
AP006219.1-201ENST00000580258 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
AP006219.1-201ENST00000580258 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
AP006219.1-201ENST00000580258 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
AP006219.1-201ENST00000580258 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
AP006219.1-201ENST00000580258 POTEIP0CG38 1075 aa12.67□□□□□ -0.38
AP006219.1-201ENST00000580258 LHX8Q68G74 356 aa12.67□□□□□ -0.38
AP006219.1-201ENST00000580258 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
AP006219.1-201ENST00000580258 EHMT2Q96KQ7 1210 aa12.51□□□□□ -0.41
AP006219.1-201ENST00000580258 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
AP006219.1-201ENST00000580258 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
AP006219.1-201ENST00000580258 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
AP006219.1-201ENST00000580258 CLCN6P51797 869 aa12.47□□□□□ -0.41
AP006219.1-201ENST00000580258 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
AP006219.1-201ENST00000580258 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
AP006219.1-201ENST00000580258 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
AP006219.1-201ENST00000580258 MNX1P50219 401 aaPredicted RBP12.34□□□□□ -0.43
AP006219.1-201ENST00000580258 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
AP006219.1-201ENST00000580258 POTEB2H3BUK9 544 aa12.25□□□□□ -0.45
AP006219.1-201ENST00000580258 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
AP006219.1-201ENST00000580258 NPM1P06748 294 aaKnown RBP eCLIP12.23□□□□□ -0.45
AP006219.1-201ENST00000580258 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
AP006219.1-201ENST00000580258 OTUD5Q96G74 571 aa12.21□□□□□ -0.45
AP006219.1-201ENST00000580258 PROM2Q8N271 834 aa12.18□□□□□ -0.46
AP006219.1-201ENST00000580258 MS4A3Q96HJ5 214 aa12.16□□□□□ -0.46
AP006219.1-201ENST00000580258 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
AP006219.1-201ENST00000580258 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
AP006219.1-201ENST00000580258 TSPYL2Q9H2G4 693 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms