RNA–Protein interactions for RNA: ENST00000580230.1

AP001496.3-201, humanhuman

BASIC

Gene AP001496.3, Length 913 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001496.3-201ENST00000580230 AEBP2Q6ZN18 517 aaPredicted RBP28.24■■■□□ 2.11
AP001496.3-201ENST00000580230 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
AP001496.3-201ENST00000580230 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
AP001496.3-201ENST00000580230 PHF23Q9BUL5 403 aaPredicted RBP23.83■■□□□ 1.41
AP001496.3-201ENST00000580230 FOXD1Q16676 465 aa22.54■■□□□ 1.2
AP001496.3-201ENST00000580230 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
AP001496.3-201ENST00000580230 MSH5O43196 834 aa21.25■□□□□ 0.99
AP001496.3-201ENST00000580230 PIAS4Q8N2W9 510 aaPredicted RBP21.04■□□□□ 0.96
AP001496.3-201ENST00000580230 POTEDQ86YR6 584 aa21.01■□□□□ 0.95
AP001496.3-201ENST00000580230 PPP6R1Q9UPN7 881 aa20.88■□□□□ 0.93
AP001496.3-201ENST00000580230 ADRA2BP18089 450 aa20.81■□□□□ 0.92
AP001496.3-201ENST00000580230 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
AP001496.3-201ENST00000580230 SCAF1Q9H7N4 1312 aaKnown RBP19.16■□□□□ 0.66
AP001496.3-201ENST00000580230 MAPK8IP2Q13387 824 aaPredicted RBP19.15■□□□□ 0.66
AP001496.3-201ENST00000580230 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
AP001496.3-201ENST00000580230 HOXD11P31277 338 aaPredicted RBP18.37■□□□□ 0.53
AP001496.3-201ENST00000580230 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
AP001496.3-201ENST00000580230 CACNB1Q02641 598 aaPredicted RBP18.31■□□□□ 0.52
AP001496.3-201ENST00000580230 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
AP001496.3-201ENST00000580230 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
AP001496.3-201ENST00000580230 RNF39Q9H2S5 420 aa18.07■□□□□ 0.48
AP001496.3-201ENST00000580230 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
AP001496.3-201ENST00000580230 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
AP001496.3-201ENST00000580230 C1QBPQ07021 282 aaKnown RBP17.84■□□□□ 0.45
AP001496.3-201ENST00000580230 NPM3O75607 178 aaKnown RBP17.53■□□□□ 0.4
AP001496.3-201ENST00000580230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
AP001496.3-201ENST00000580230 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
AP001496.3-201ENST00000580230 KCNA4P22459 653 aa17■□□□□ 0.31
AP001496.3-201ENST00000580230 CAPN15O75808 1086 aa16.89■□□□□ 0.29
AP001496.3-201ENST00000580230 SPINK5Q9NQ38 1064 aaPredicted RBP16.87■□□□□ 0.29
AP001496.3-201ENST00000580230 DSG3P32926 999 aa16.84■□□□□ 0.29
AP001496.3-201ENST00000580230 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
AP001496.3-201ENST00000580230 APLP2Q06481 763 aa16.7■□□□□ 0.26
AP001496.3-201ENST00000580230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.63■□□□□ 0.25
AP001496.3-201ENST00000580230 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
AP001496.3-201ENST00000580230 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
AP001496.3-201ENST00000580230 TRHP20396 242 aaPredicted RBP16.56■□□□□ 0.24
AP001496.3-201ENST00000580230 SAMD1Q6SPF0 538 aaPredicted RBP16.51■□□□□ 0.23
AP001496.3-201ENST00000580230 ABCB7O75027 752 aa16.45■□□□□ 0.22
AP001496.3-201ENST00000580230 POTEHQ6S545 545 aa16.44■□□□□ 0.22
AP001496.3-201ENST00000580230 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
AP001496.3-201ENST00000580230 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
AP001496.3-201ENST00000580230 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
AP001496.3-201ENST00000580230 POLA2Q14181 598 aa16.08■□□□□ 0.16
AP001496.3-201ENST00000580230 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
AP001496.3-201ENST00000580230 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
AP001496.3-201ENST00000580230 ZBTB12Q9Y330 459 aaPredicted RBP15.83■□□□□ 0.12
AP001496.3-201ENST00000580230 CHRDL2Q6WN34 429 aa15.82■□□□□ 0.12
AP001496.3-201ENST00000580230 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
AP001496.3-201ENST00000580230 AKT1S1Q96B36 256 aa15.71■□□□□ 0.11
AP001496.3-201ENST00000580230 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
AP001496.3-201ENST00000580230 ZBTB22O15209 634 aa15.6■□□□□ 0.09
AP001496.3-201ENST00000580230 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
AP001496.3-201ENST00000580230 ATXN8OSP0DMR3 200 aa15.55■□□□□ 0.08
AP001496.3-201ENST00000580230 REM2Q8IYK8 340 aaPredicted RBP15.53■□□□□ 0.08
AP001496.3-201ENST00000580230 PIP4P2Q8N4L2 257 aa15.38■□□□□ 0.05
AP001496.3-201ENST00000580230 PITPNM1O00562 1244 aa15.35■□□□□ 0.05
AP001496.3-201ENST00000580230 FBLN2P98095 1184 aa15.33■□□□□ 0.04
AP001496.3-201ENST00000580230 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
AP001496.3-201ENST00000580230 SPDYE2BA6NHP3 402 aa15.29■□□□□ 0.04
AP001496.3-201ENST00000580230 SPDYE6P0CI01 402 aa15.29■□□□□ 0.04
AP001496.3-201ENST00000580230 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
AP001496.3-201ENST00000580230 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
AP001496.3-201ENST00000580230 HAX1O00165 279 aa15.17■□□□□ 0.02
AP001496.3-201ENST00000580230 MKRN4PQ13434 485 aaPredicted RBP15.1■□□□□ 0.01
AP001496.3-201ENST00000580230 SPDYE1Q8NFV5 336 aaPredicted RBP15.08■□□□□ 0
AP001496.3-201ENST00000580230 ZNF692Q9BU19 519 aaPredicted RBP15.04■□□□□ -0
AP001496.3-201ENST00000580230 SSUH2Q9Y2M2 353 aa15.04■□□□□ -0
AP001496.3-201ENST00000580230 CLEC11AQ9Y240 323 aa15□□□□□ -0.01
AP001496.3-201ENST00000580230 PRKAR2AP13861 404 aaKnown RBP14.96□□□□□ -0.01
AP001496.3-201ENST00000580230 EVX2Q03828 476 aa14.9□□□□□ -0.02
AP001496.3-201ENST00000580230 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
AP001496.3-201ENST00000580230 C19orf67A6NJJ6 358 aa14.79□□□□□ -0.04
AP001496.3-201ENST00000580230 PRR29P0C7W0 189 aa14.75□□□□□ -0.05
AP001496.3-201ENST00000580230 CHADLQ6NUI6 762 aa14.69□□□□□ -0.06
AP001496.3-201ENST00000580230 GABBR2O75899 941 aa14.6□□□□□ -0.07
AP001496.3-201ENST00000580230 FARP1Q9Y4F1 1045 aaPredicted RBP14.52□□□□□ -0.09
AP001496.3-201ENST00000580230 CD44P16070 742 aaKnown RBP14.48□□□□□ -0.09
AP001496.3-201ENST00000580230 CLCN6P51797 869 aa14.42□□□□□ -0.1
AP001496.3-201ENST00000580230 STAG3Q9UJ98 1225 aa14.42□□□□□ -0.1
AP001496.3-201ENST00000580230 LHX8Q68G74 356 aa14.37□□□□□ -0.11
AP001496.3-201ENST00000580230 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
AP001496.3-201ENST00000580230 CREBZFQ9NS37 354 aa14.31□□□□□ -0.12
AP001496.3-201ENST00000580230 ZNF579Q8NAF0 562 aaKnown RBP14.27□□□□□ -0.13
AP001496.3-201ENST00000580230 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
AP001496.3-201ENST00000580230 ZRANB1Q9UGI0 708 aa14.24□□□□□ -0.13
AP001496.3-201ENST00000580230 DCBLD2Q96PD2 775 aa14.21□□□□□ -0.13
AP001496.3-201ENST00000580230 FKBP8Q14318 412 aa14.18□□□□□ -0.14
AP001496.3-201ENST00000580230 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
AP001496.3-201ENST00000580230 NISCHQ9Y2I1 1504 aa14.11□□□□□ -0.15
AP001496.3-201ENST00000580230 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
AP001496.3-201ENST00000580230 GALR2O43603 387 aaPredicted RBP14.06□□□□□ -0.16
AP001496.3-201ENST00000580230 MNX1P50219 401 aaPredicted RBP14.03□□□□□ -0.16
AP001496.3-201ENST00000580230 PHF12Q96QT6 1004 aa14□□□□□ -0.17
AP001496.3-201ENST00000580230 PROM2Q8N271 834 aa13.96□□□□□ -0.17
AP001496.3-201ENST00000580230 AMER1Q5JTC6 1135 aaPredicted RBP13.95□□□□□ -0.18
AP001496.3-201ENST00000580230 RTN4Q9NQC3 1192 aaKnown RBP13.84□□□□□ -0.19
AP001496.3-201ENST00000580230 MS4A3Q96HJ5 214 aa13.81□□□□□ -0.2
AP001496.3-201ENST00000580230 OTUD5Q96G74 571 aa13.8□□□□□ -0.2
AP001496.3-201ENST00000580230 ASTLQ6HA08 431 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms