RNA–Protein interactions for RNA: ENST00000579278.1

AC116003.2-201, humanhuman

TSL 2 BASIC

Gene AC116003.2, Length 748 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116003.2-201ENST00000579278 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
AC116003.2-201ENST00000579278 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
AC116003.2-201ENST00000579278 SENP3Q9H4L4 574 aaPredicted RBP20.32■□□□□ 0.84
AC116003.2-201ENST00000579278 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
AC116003.2-201ENST00000579278 FOXD1Q16676 465 aa18.91■□□□□ 0.62
AC116003.2-201ENST00000579278 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
AC116003.2-201ENST00000579278 MSH5O43196 834 aa17.71■□□□□ 0.43
AC116003.2-201ENST00000579278 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
AC116003.2-201ENST00000579278 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
AC116003.2-201ENST00000579278 ADRA2BP18089 450 aa17.62■□□□□ 0.41
AC116003.2-201ENST00000579278 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
AC116003.2-201ENST00000579278 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
AC116003.2-201ENST00000579278 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
AC116003.2-201ENST00000579278 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
AC116003.2-201ENST00000579278 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
AC116003.2-201ENST00000579278 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
AC116003.2-201ENST00000579278 HOXD11P31277 338 aaPredicted RBP15.56■□□□□ 0.08
AC116003.2-201ENST00000579278 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
AC116003.2-201ENST00000579278 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
AC116003.2-201ENST00000579278 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
AC116003.2-201ENST00000579278 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
AC116003.2-201ENST00000579278 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
AC116003.2-201ENST00000579278 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
AC116003.2-201ENST00000579278 NPM3O75607 178 aaKnown RBP15.05■□□□□ -0
AC116003.2-201ENST00000579278 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
AC116003.2-201ENST00000579278 KCNA4P22459 653 aa14.77□□□□□ -0.05
AC116003.2-201ENST00000579278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
AC116003.2-201ENST00000579278 U3KPZ7 1027 aaPredicted RBP14.48□□□□□ -0.09
AC116003.2-201ENST00000579278 SLC4A2P04920 1241 aa14.37□□□□□ -0.11
AC116003.2-201ENST00000579278 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
AC116003.2-201ENST00000579278 CAPN15O75808 1086 aa14.2□□□□□ -0.14
AC116003.2-201ENST00000579278 DSG3P32926 999 aa14.15□□□□□ -0.14
AC116003.2-201ENST00000579278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.11□□□□□ -0.15
AC116003.2-201ENST00000579278 APLP2Q06481 763 aa14.11□□□□□ -0.15
AC116003.2-201ENST00000579278 HNRNPUL2Q1KMD3 747 aaKnown RBP14.11□□□□□ -0.15
AC116003.2-201ENST00000579278 SAMD1Q6SPF0 538 aaPredicted RBP14.02□□□□□ -0.17
AC116003.2-201ENST00000579278 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
AC116003.2-201ENST00000579278 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
AC116003.2-201ENST00000579278 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
AC116003.2-201ENST00000579278 MYCNP04198 464 aaPredicted RBP13.93□□□□□ -0.18
AC116003.2-201ENST00000579278 ABCB7O75027 752 aa13.86□□□□□ -0.19
AC116003.2-201ENST00000579278 FOXD4L1Q9NU39 408 aa13.8□□□□□ -0.2
AC116003.2-201ENST00000579278 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
AC116003.2-201ENST00000579278 POLA2Q14181 598 aa13.63□□□□□ -0.23
AC116003.2-201ENST00000579278 ZBTB22O15209 634 aa13.58□□□□□ -0.24
AC116003.2-201ENST00000579278 ATF5Q9Y2D1 282 aaPredicted RBP13.57□□□□□ -0.24
AC116003.2-201ENST00000579278 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
AC116003.2-201ENST00000579278 POTEHQ6S545 545 aa13.48□□□□□ -0.25
AC116003.2-201ENST00000579278 ATXN8OSP0DMR3 200 aa13.41□□□□□ -0.26
AC116003.2-201ENST00000579278 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
AC116003.2-201ENST00000579278 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
AC116003.2-201ENST00000579278 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
AC116003.2-201ENST00000579278 CHRDL2Q6WN34 429 aa13.18□□□□□ -0.3
AC116003.2-201ENST00000579278 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
AC116003.2-201ENST00000579278 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
AC116003.2-201ENST00000579278 FBLN2P98095 1184 aa13.06□□□□□ -0.32
AC116003.2-201ENST00000579278 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
AC116003.2-201ENST00000579278 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
AC116003.2-201ENST00000579278 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
AC116003.2-201ENST00000579278 MKRN4PQ13434 485 aaPredicted RBP12.97□□□□□ -0.33
AC116003.2-201ENST00000579278 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
AC116003.2-201ENST00000579278 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
AC116003.2-201ENST00000579278 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
AC116003.2-201ENST00000579278 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
AC116003.2-201ENST00000579278 ZNF692Q9BU19 519 aaPredicted RBP12.8□□□□□ -0.36
AC116003.2-201ENST00000579278 SPDYE1Q8NFV5 336 aaPredicted RBP12.74□□□□□ -0.37
AC116003.2-201ENST00000579278 SP7Q8TDD2 431 aaPredicted RBP12.66□□□□□ -0.38
AC116003.2-201ENST00000579278 CLEC11AQ9Y240 323 aa12.66□□□□□ -0.38
AC116003.2-201ENST00000579278 HAX1O00165 279 aa12.61□□□□□ -0.39
AC116003.2-201ENST00000579278 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
AC116003.2-201ENST00000579278 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
AC116003.2-201ENST00000579278 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
AC116003.2-201ENST00000579278 EVX2Q03828 476 aa12.46□□□□□ -0.41
AC116003.2-201ENST00000579278 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
AC116003.2-201ENST00000579278 CHADLQ6NUI6 762 aa12.42□□□□□ -0.42
AC116003.2-201ENST00000579278 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
AC116003.2-201ENST00000579278 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
AC116003.2-201ENST00000579278 FARP1Q9Y4F1 1045 aaPredicted RBP12.28□□□□□ -0.44
AC116003.2-201ENST00000579278 GABBR2O75899 941 aa12.2□□□□□ -0.46
AC116003.2-201ENST00000579278 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
AC116003.2-201ENST00000579278 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
AC116003.2-201ENST00000579278 PROM2Q8N271 834 aa12.13□□□□□ -0.47
AC116003.2-201ENST00000579278 CLCN6P51797 869 aa12.1□□□□□ -0.47
AC116003.2-201ENST00000579278 FKBP8Q14318 412 aa12.05□□□□□ -0.48
AC116003.2-201ENST00000579278 ZNF579Q8NAF0 562 aaKnown RBP12.04□□□□□ -0.48
AC116003.2-201ENST00000579278 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
AC116003.2-201ENST00000579278 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
AC116003.2-201ENST00000579278 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
AC116003.2-201ENST00000579278 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
AC116003.2-201ENST00000579278 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
AC116003.2-201ENST00000579278 LHX8Q68G74 356 aa11.87□□□□□ -0.51
AC116003.2-201ENST00000579278 DCBLD2Q96PD2 775 aa11.86□□□□□ -0.51
AC116003.2-201ENST00000579278 GALR2O43603 387 aaPredicted RBP11.84□□□□□ -0.51
AC116003.2-201ENST00000579278 PHF12Q96QT6 1004 aa11.83□□□□□ -0.52
AC116003.2-201ENST00000579278 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
AC116003.2-201ENST00000579278 MIER1Q8N108 512 aa11.77□□□□□ -0.53
AC116003.2-201ENST00000579278 TSPYL2Q9H2G4 693 aaPredicted RBP11.72□□□□□ -0.53
AC116003.2-201ENST00000579278 CCDC61Q9Y6R9 512 aa11.72□□□□□ -0.53
AC116003.2-201ENST00000579278 MS4A3Q96HJ5 214 aa11.7□□□□□ -0.54
AC116003.2-201ENST00000579278 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms