RNA–Protein interactions for RNA: ENST00000579008.1

AP001094.4-201, humanhuman

BASIC

Gene AP001094.4, Length 2,176 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001094.4-201ENST00000579008 NISCHQ9Y2I1 1504 aa36.89■■■■□ 3.5
AP001094.4-201ENST00000579008 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
AP001094.4-201ENST00000579008 ZCCHC6Q5VYS8 1495 aaKnown RBP31.18■■■□□ 2.58
AP001094.4-201ENST00000579008 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
AP001094.4-201ENST00000579008 DCAF1Q9Y4B6 1507 aa30.39■■■□□ 2.46
AP001094.4-201ENST00000579008 SUPT5HO00267 1087 aaKnown RBP30.37■■■□□ 2.45
AP001094.4-201ENST00000579008 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
AP001094.4-201ENST00000579008 MYO15BQ96JP2 1530 aa29.62■■■□□ 2.33
AP001094.4-201ENST00000579008 CHIC1Q5VXU3 224 aa29.56■■■□□ 2.32
AP001094.4-201ENST00000579008 ABCC9O60706 1549 aa29.36■■■□□ 2.29
AP001094.4-201ENST00000579008 SCRIBQ14160 1630 aa29.34■■■□□ 2.29
AP001094.4-201ENST00000579008 NACADO15069 1562 aa29.18■■■□□ 2.26
AP001094.4-201ENST00000579008 RSF1Q96T23 1441 aaPredicted RBP29.08■■■□□ 2.25
AP001094.4-201ENST00000579008 RB1CC1Q8TDY2 1594 aa28.76■■■□□ 2.19
AP001094.4-201ENST00000579008 CECR2Q9BXF3 1484 aa28.7■■■□□ 2.19
AP001094.4-201ENST00000579008 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
AP001094.4-201ENST00000579008 LOC105371045A0A1W2PR82 267 aa28.57■■■□□ 2.16
AP001094.4-201ENST00000579008 WIZO95785 1651 aa28.42■■■□□ 2.14
AP001094.4-201ENST00000579008 TRIM41Q8WV44 630 aa28.4■■■□□ 2.14
AP001094.4-201ENST00000579008 BAZ1AQ9NRL2 1556 aaPredicted RBP28.36■■■□□ 2.13
AP001094.4-201ENST00000579008 PCGF6Q9BYE7 350 aa28.33■■■□□ 2.12
AP001094.4-201ENST00000579008 HRCP23327 699 aa28.28■■■□□ 2.12
AP001094.4-201ENST00000579008 UNC13AQ9UPW8 1703 aa28.24■■■□□ 2.11
AP001094.4-201ENST00000579008 SMARCA4P51532 1647 aa28.13■■■□□ 2.09
AP001094.4-201ENST00000579008 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
AP001094.4-201ENST00000579008 EIF4G1Q04637 1599 aaKnown RBP28.05■■■□□ 2.08
AP001094.4-201ENST00000579008 FAM9AQ8IZU1 332 aaPredicted RBP28.02■■■□□ 2.08
AP001094.4-201ENST00000579008 TRIM26Q12899 539 aaPredicted RBP27.96■■■□□ 2.07
AP001094.4-201ENST00000579008 BICRAQ9NZM4 1560 aa27.92■■■□□ 2.06
AP001094.4-201ENST00000579008 CCDC88BA6NC98 1476 aa27.89■■■□□ 2.06
AP001094.4-201ENST00000579008 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
AP001094.4-201ENST00000579008 PABPN1Q86U42 306 aaKnown RBP eCLIP27.8■■■□□ 2.04
AP001094.4-201ENST00000579008 PEG3Q9GZU2 1588 aa27.69■■■□□ 2.02
AP001094.4-201ENST00000579008 ABCC8Q09428 1581 aa27.68■■■□□ 2.02
AP001094.4-201ENST00000579008 EHMT2Q96KQ7 1210 aa27.67■■■□□ 2.02
AP001094.4-201ENST00000579008 PPARGC1BQ86YN6 1023 aaKnown RBP27.58■■■□□ 2.01
AP001094.4-201ENST00000579008 ATAD2BQ9ULI0 1458 aa27.45■■□□□ 1.98
AP001094.4-201ENST00000579008 SOGA1O94964 1423 aa27.39■■□□□ 1.98
AP001094.4-201ENST00000579008 EEA1Q15075 1411 aa27.37■■□□□ 1.97
AP001094.4-201ENST00000579008 BAZ1BQ9UIG0 1483 aaKnown RBP27.33■■□□□ 1.97
AP001094.4-201ENST00000579008 WRNQ14191 1432 aaPredicted RBP eCLIP27.31■■□□□ 1.96
AP001094.4-201ENST00000579008 ZEB1P37275 1124 aaPredicted RBP27.29■■□□□ 1.96
AP001094.4-201ENST00000579008 CSRNP3Q8WYN3 585 aa27.26■■□□□ 1.95
AP001094.4-201ENST00000579008 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
AP001094.4-201ENST00000579008 TNIKQ9UKE5 1360 aa27.24■■□□□ 1.95
AP001094.4-201ENST00000579008 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
AP001094.4-201ENST00000579008 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
AP001094.4-201ENST00000579008 GOLGA3Q08378 1498 aa27.1■■□□□ 1.93
AP001094.4-201ENST00000579008 UBTFP17480 764 aaKnown RBP27.04■■□□□ 1.92
AP001094.4-201ENST00000579008 NCAPD3P42695 1498 aa27■■□□□ 1.91
AP001094.4-201ENST00000579008 HMGXB3Q12766 1538 aa26.99■■□□□ 1.91
AP001094.4-201ENST00000579008 CEP164Q9UPV0 1460 aa26.98■■□□□ 1.91
AP001094.4-201ENST00000579008 KIF21BO75037 1637 aa26.98■■□□□ 1.91
AP001094.4-201ENST00000579008 TOP2BQ02880 1626 aa26.92■■□□□ 1.9
AP001094.4-201ENST00000579008 BIVM-ERCC5R4GMW8 1640 aa26.84■■□□□ 1.89
AP001094.4-201ENST00000579008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.77■■□□□ 1.88
AP001094.4-201ENST00000579008 RAPGEF2Q9Y4G8 1499 aa26.76■■□□□ 1.87
AP001094.4-201ENST00000579008 TTBK1Q5TCY1 1321 aaPredicted RBP26.75■■□□□ 1.87
AP001094.4-201ENST00000579008 CLIP1P30622 1438 aa26.74■■□□□ 1.87
AP001094.4-201ENST00000579008 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
AP001094.4-201ENST00000579008 CFTRP13569 1480 aa26.71■■□□□ 1.87
AP001094.4-201ENST00000579008 CUX1P39880 1505 aa26.66■■□□□ 1.86
AP001094.4-201ENST00000579008 VPS8Q8N3P4 1428 aa26.64■■□□□ 1.86
AP001094.4-201ENST00000579008 PRXQ9BXM0 1461 aa26.6■■□□□ 1.85
AP001094.4-201ENST00000579008 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
AP001094.4-201ENST00000579008 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
AP001094.4-201ENST00000579008 PRDM2Q13029 1718 aa26.5■■□□□ 1.83
AP001094.4-201ENST00000579008 CADPSQ9ULU8 1353 aa26.42■■□□□ 1.82
AP001094.4-201ENST00000579008 APLP2Q06481 763 aa26.42■■□□□ 1.82
AP001094.4-201ENST00000579008 RANGAP1P46060 587 aaPredicted RBP26.41■■□□□ 1.82
AP001094.4-201ENST00000579008 ARAP1Q96P48 1450 aa26.35■■□□□ 1.81
AP001094.4-201ENST00000579008 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
AP001094.4-201ENST00000579008 HNRNPUL2Q1KMD3 747 aaKnown RBP26.27■■□□□ 1.8
AP001094.4-201ENST00000579008 CUX2O14529 1486 aa26.24■■□□□ 1.79
AP001094.4-201ENST00000579008 IGF1RP08069 1367 aa26.23■■□□□ 1.79
AP001094.4-201ENST00000579008 FGD5Q6ZNL6 1462 aa26.2■■□□□ 1.79
AP001094.4-201ENST00000579008 ARHGAP35Q9NRY4 1499 aa26.17■■□□□ 1.78
AP001094.4-201ENST00000579008 FANCD2Q9BXW9 1451 aa26.14■■□□□ 1.77
AP001094.4-201ENST00000579008 KANK4Q5T7N3 995 aaPredicted RBP26.12■■□□□ 1.77
AP001094.4-201ENST00000579008 DIEXFQ68CQ4 756 aaKnown RBP26.1■■□□□ 1.77
AP001094.4-201ENST00000579008 CARMIL1Q5VZK9 1371 aa26.1■■□□□ 1.77
AP001094.4-201ENST00000579008 DNMBPQ6XZF7 1577 aa26.02■■□□□ 1.76
AP001094.4-201ENST00000579008 RRBP1Q9P2E9 1410 aaKnown RBP26.02■■□□□ 1.76
AP001094.4-201ENST00000579008 ZNF316A6NFI3 1004 aaPredicted RBP26■■□□□ 1.75
AP001094.4-201ENST00000579008 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
AP001094.4-201ENST00000579008 ABCA10Q8WWZ4 1543 aa25.95■■□□□ 1.74
AP001094.4-201ENST00000579008 NESP48681 1621 aa25.95■■□□□ 1.74
AP001094.4-201ENST00000579008 POLA1P09884 1462 aaPredicted RBP25.94■■□□□ 1.74
AP001094.4-201ENST00000579008 MAP3K1Q13233 1512 aa25.92■■□□□ 1.74
AP001094.4-201ENST00000579008 RAD54L2Q9Y4B4 1467 aa25.92■■□□□ 1.74
AP001094.4-201ENST00000579008 CLSPNQ9HAW4 1339 aa25.9■■□□□ 1.74
AP001094.4-201ENST00000579008 CCNB3Q8WWL7 1395 aa25.87■■□□□ 1.73
AP001094.4-201ENST00000579008 TIAM1Q13009 1591 aa25.86■■□□□ 1.73
AP001094.4-201ENST00000579008 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
AP001094.4-201ENST00000579008 DHX57Q6P158 1386 aaKnown RBP25.86■■□□□ 1.73
AP001094.4-201ENST00000579008 SCAF1Q9H7N4 1312 aaKnown RBP25.84■■□□□ 1.73
AP001094.4-201ENST00000579008 FHAD1B1AJZ9 1412 aa25.81■■□□□ 1.72
AP001094.4-201ENST00000579008 CUL7Q14999 1698 aa25.79■■□□□ 1.72
AP001094.4-201ENST00000579008 URB2Q14146 1524 aaKnown RBP25.77■■□□□ 1.72
AP001094.4-201ENST00000579008 LRRC9Q6ZRR7 1453 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms