RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 NISCHQ9Y2I1 1504 aa33.12■■■□□ 2.89
DDX42-208ENST00000578681 DCAF8L2P0C7V8 631 aa30■■■□□ 2.39
DDX42-208ENST00000578681 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
DDX42-208ENST00000578681 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
DDX42-208ENST00000578681 ZCCHC6Q5VYS8 1495 aaKnown RBP27.72■■■□□ 2.03
DDX42-208ENST00000578681 CCDC180Q9P1Z9 1646 aa27.65■■■□□ 2.02
DDX42-208ENST00000578681 EHMT2Q96KQ7 1210 aa27.47■■□□□ 1.99
DDX42-208ENST00000578681 ABCC9O60706 1549 aa27.45■■□□□ 1.98
DDX42-208ENST00000578681 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
DDX42-208ENST00000578681 FAM9AQ8IZU1 332 aaPredicted RBP27.22■■□□□ 1.95
DDX42-208ENST00000578681 LOC105371045A0A1W2PR82 267 aa26.94■■□□□ 1.9
DDX42-208ENST00000578681 TRIM41Q8WV44 630 aa26.93■■□□□ 1.9
DDX42-208ENST00000578681 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
DDX42-208ENST00000578681 PCGF6Q9BYE7 350 aa26.86■■□□□ 1.89
DDX42-208ENST00000578681 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.861e-6■■□□□ 14.2
DDX42-208ENST00000578681 DCAF1Q9Y4B6 1507 aa26.56■■□□□ 1.84
DDX42-208ENST00000578681 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
DDX42-208ENST00000578681 TTBK1Q5TCY1 1321 aaPredicted RBP26.41■■□□□ 1.82
DDX42-208ENST00000578681 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
DDX42-208ENST00000578681 RSF1Q96T23 1441 aaPredicted RBP26.33■■□□□ 1.81
DDX42-208ENST00000578681 PELP1Q8IZL8 1130 aaKnown RBP26.28■■□□□ 1.8
DDX42-208ENST00000578681 CECR2Q9BXF3 1484 aa26.18■■□□□ 1.78
DDX42-208ENST00000578681 RANGAP1P46060 587 aaPredicted RBP26.17■■□□□ 1.78
DDX42-208ENST00000578681 NACADO15069 1562 aa26.15■■□□□ 1.78
DDX42-208ENST00000578681 UBTFP17480 764 aaKnown RBP26.04■■□□□ 1.76
DDX42-208ENST00000578681 RB1CC1Q8TDY2 1594 aa26.01■■□□□ 1.76
DDX42-208ENST00000578681 HRCP23327 699 aa25.95■■□□□ 1.75
DDX42-208ENST00000578681 TRIM26Q12899 539 aaPredicted RBP25.95■■□□□ 1.74
DDX42-208ENST00000578681 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
DDX42-208ENST00000578681 MYT1Q01538 1121 aa25.76■■□□□ 1.71
DDX42-208ENST00000578681 APLP2Q06481 763 aa25.65■■□□□ 1.7
DDX42-208ENST00000578681 WIZO95785 1651 aa25.62■■□□□ 1.69
DDX42-208ENST00000578681 CCER1Q8TC90 406 aaPredicted RBP25.55■■□□□ 1.68
DDX42-208ENST00000578681 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
DDX42-208ENST00000578681 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
DDX42-208ENST00000578681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.39■■□□□ 1.66
DDX42-208ENST00000578681 CCDC88BA6NC98 1476 aa25.33■■□□□ 1.65
DDX42-208ENST00000578681 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
DDX42-208ENST00000578681 ATP1B4Q9UN42 357 aaPredicted RBP25.31■■□□□ 1.64
DDX42-208ENST00000578681 ABCC8Q09428 1581 aa25.28■■□□□ 1.64
DDX42-208ENST00000578681 HNRNPUL2Q1KMD3 747 aaKnown RBP25.25■■□□□ 1.63
DDX42-208ENST00000578681 SMARCA4P51532 1647 aa25.16■■□□□ 1.62
DDX42-208ENST00000578681 SOGA1O94964 1423 aa25.16■■□□□ 1.62
DDX42-208ENST00000578681 BAZ1BQ9UIG0 1483 aaKnown RBP25.16■■□□□ 1.62
DDX42-208ENST00000578681 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
DDX42-208ENST00000578681 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
DDX42-208ENST00000578681 ITGAEP38570 1179 aa25.05■■□□□ 1.6
DDX42-208ENST00000578681 CEP162Q5TB80 1403 aa24.93■■□□□ 1.58
DDX42-208ENST00000578681 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
DDX42-208ENST00000578681 RUSC2Q8N2Y8 1516 aa24.91■■□□□ 1.58
DDX42-208ENST00000578681 SMARCA2P51531 1590 aa24.9■■□□□ 1.58
DDX42-208ENST00000578681 P3H3Q8IVL6 736 aa24.85■■□□□ 1.57
DDX42-208ENST00000578681 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
DDX42-208ENST00000578681 UNC13AQ9UPW8 1703 aa24.76■■□□□ 1.55
DDX42-208ENST00000578681 TNIKQ9UKE5 1360 aa24.76■■□□□ 1.55
DDX42-208ENST00000578681 GOLGA3Q08378 1498 aa24.74■■□□□ 1.55
DDX42-208ENST00000578681 EEA1Q15075 1411 aa24.73■■□□□ 1.55
DDX42-208ENST00000578681 CLIP1P30622 1438 aa24.72■■□□□ 1.55
DDX42-208ENST00000578681 YTHDC1Q96MU7 727 aaKnown RBP24.6■■□□□ 1.53
DDX42-208ENST00000578681 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
DDX42-208ENST00000578681 FAM50AQ14320 339 aaKnown RBP24.54■■□□□ 1.52
DDX42-208ENST00000578681 DIEXFQ68CQ4 756 aaKnown RBP24.51■■□□□ 1.51
DDX42-208ENST00000578681 ARID3CA6NKF2 412 aa24.46■■□□□ 1.51
DDX42-208ENST00000578681 KIF27Q86VH2 1401 aa24.45■■□□□ 1.51
DDX42-208ENST00000578681 RAPGEF2Q9Y4G8 1499 aa24.45■■□□□ 1.5
DDX42-208ENST00000578681 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
DDX42-208ENST00000578681 SYNJ1O43426 1573 aa24.4■■□□□ 1.5
DDX42-208ENST00000578681 CUX2O14529 1486 aa24.36■■□□□ 1.49
DDX42-208ENST00000578681 NCAPD3P42695 1498 aa24.33■■□□□ 1.48
DDX42-208ENST00000578681 FBLN2P98095 1184 aa24.3■■□□□ 1.48
DDX42-208ENST00000578681 KANK4Q5T7N3 995 aaPredicted RBP24.3■■□□□ 1.48
DDX42-208ENST00000578681 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
DDX42-208ENST00000578681 CENPBP07199 599 aaPredicted RBP24.29■■□□□ 1.48
DDX42-208ENST00000578681 NEUROD1Q13562 356 aa24.27■■□□□ 1.48
DDX42-208ENST00000578681 VPS8Q8N3P4 1428 aa24.24■■□□□ 1.47
DDX42-208ENST00000578681 ZNF316A6NFI3 1004 aaPredicted RBP24.23■■□□□ 1.47
DDX42-208ENST00000578681 CARMIL1Q5VZK9 1371 aa24.21■■□□□ 1.47
DDX42-208ENST00000578681 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
DDX42-208ENST00000578681 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
DDX42-208ENST00000578681 TDRD9Q8NDG6 1382 aaKnown RBP24.1■■□□□ 1.45
DDX42-208ENST00000578681 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
DDX42-208ENST00000578681 CFTRP13569 1480 aa24.07■■□□□ 1.44
DDX42-208ENST00000578681 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
DDX42-208ENST00000578681 CUX1P39880 1505 aa24.03■■□□□ 1.44
DDX42-208ENST00000578681 NESP48681 1621 aa24.01■■□□□ 1.43
DDX42-208ENST00000578681 HMGXB3Q12766 1538 aa24■■□□□ 1.43
DDX42-208ENST00000578681 IGF1RP08069 1367 aa24■■□□□ 1.43
DDX42-208ENST00000578681 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
DDX42-208ENST00000578681 RAD54L2Q9Y4B4 1467 aa23.98■■□□□ 1.43
DDX42-208ENST00000578681 CC2D2AQ9P2K1 1620 aa23.98■■□□□ 1.43
DDX42-208ENST00000578681 TOP2BQ02880 1626 aa23.98■■□□□ 1.43
DDX42-208ENST00000578681 TRIM52Q96A61 297 aa23.98■■□□□ 1.43
DDX42-208ENST00000578681 CHIC2Q9UKJ5 165 aa23.94■■□□□ 1.42
DDX42-208ENST00000578681 KIF21BO75037 1637 aa23.92■■□□□ 1.42
DDX42-208ENST00000578681 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
DDX42-208ENST00000578681 CCNB3Q8WWL7 1395 aa23.87■■□□□ 1.41
DDX42-208ENST00000578681 MIER1Q8N108 512 aa23.86■■□□□ 1.41
DDX42-208ENST00000578681 PRXQ9BXM0 1461 aa23.85■■□□□ 1.41
DDX42-208ENST00000578681 FHOD3Q2V2M9 1422 aa23.84■■□□□ 1.41
DDX42-208ENST00000578681 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms