RNA–Protein interactions for RNA: ENST00000578205.5

RHOT1-206, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 2,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-206ENST00000578205 AEBP2Q6ZN18 517 aaPredicted RBP18.53■□□□□ 0.56
RHOT1-206ENST00000578205 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
RHOT1-206ENST00000578205 SENP3Q9H4L4 574 aaPredicted RBP15.85■□□□□ 0.13
RHOT1-206ENST00000578205 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
RHOT1-206ENST00000578205 FOXD1Q16676 465 aa14.77□□□□□ -0.04
RHOT1-206ENST00000578205 PLPPR3Q6T4P5 718 aa13.96□□□□□ -0.17
RHOT1-206ENST00000578205 MSH5O43196 834 aa13.88□□□□□ -0.19
RHOT1-206ENST00000578205 PIAS4Q8N2W9 510 aaPredicted RBP13.8□□□□□ -0.2
RHOT1-206ENST00000578205 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
RHOT1-206ENST00000578205 POTEDQ86YR6 584 aa13.71□□□□□ -0.21
RHOT1-206ENST00000578205 ADRA2BP18089 450 aa13.69□□□□□ -0.22
RHOT1-206ENST00000578205 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
RHOT1-206ENST00000578205 SCAF1Q9H7N4 1312 aaKnown RBP12.55□□□□□ -0.4
RHOT1-206ENST00000578205 DMRT2Q9Y5R5 561 aa12.54□□□□□ -0.4
RHOT1-206ENST00000578205 PPP4R3CPQ6ZMV5 832 aa12.22□□□□□ -0.45
RHOT1-206ENST00000578205 DCAF8L1A6NGE4 600 aa12.07□□□□□ -0.48
RHOT1-206ENST00000578205 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
RHOT1-206ENST00000578205 CNKSR2Q8WXI2 1034 aa12.01□□□□□ -0.49
RHOT1-206ENST00000578205 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
RHOT1-206ENST00000578205 RNF216Q9NWF9 866 aaPredicted RBP11.93□□□□□ -0.5
RHOT1-206ENST00000578205 RNF39Q9H2S5 420 aa11.82□□□□□ -0.52
RHOT1-206ENST00000578205 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
RHOT1-206ENST00000578205 C1QBPQ07021 282 aaKnown RBP11.66□□□□□ -0.54
RHOT1-206ENST00000578205 DNAJC5BQ9UF47 199 aa11.64□□□□□ -0.55
RHOT1-206ENST00000578205 NPM3O75607 178 aaKnown RBP11.54□□□□□ -0.56
RHOT1-206ENST00000578205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.5□□□□□ -0.57
RHOT1-206ENST00000578205 KCNA4P22459 653 aa11.23□□□□□ -0.61
RHOT1-206ENST00000578205 U3KPZ7 1027 aaPredicted RBP11.22□□□□□ -0.61
RHOT1-206ENST00000578205 CAPN15O75808 1086 aa11.1□□□□□ -0.63
RHOT1-206ENST00000578205 SPINK5Q9NQ38 1064 aaPredicted RBP11.09□□□□□ -0.63
RHOT1-206ENST00000578205 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
RHOT1-206ENST00000578205 DSG3P32926 999 aa11.04□□□□□ -0.64
RHOT1-206ENST00000578205 APLP2Q06481 763 aa10.93□□□□□ -0.66
RHOT1-206ENST00000578205 TRHP20396 242 aaPredicted RBP10.9□□□□□ -0.66
RHOT1-206ENST00000578205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.89□□□□□ -0.67
RHOT1-206ENST00000578205 HNRNPUL2Q1KMD3 747 aaKnown RBP10.89□□□□□ -0.67
RHOT1-206ENST00000578205 ZNF219Q9P2Y4 722 aaPredicted RBP10.87□□□□□ -0.67
RHOT1-206ENST00000578205 ABCB7O75027 752 aa10.82□□□□□ -0.68
RHOT1-206ENST00000578205 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
RHOT1-206ENST00000578205 POTEHQ6S545 545 aa10.74□□□□□ -0.69
RHOT1-206ENST00000578205 MYCNP04198 464 aaPredicted RBP10.69□□□□□ -0.7
RHOT1-206ENST00000578205 SLC4A1APQ9BWU0 796 aaKnown RBP10.6□□□□□ -0.71
RHOT1-206ENST00000578205 POLA2Q14181 598 aa10.57□□□□□ -0.72
RHOT1-206ENST00000578205 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
RHOT1-206ENST00000578205 FOXD4L1Q9NU39 408 aa10.52□□□□□ -0.73
RHOT1-206ENST00000578205 ATF5Q9Y2D1 282 aaPredicted RBP10.43□□□□□ -0.74
RHOT1-206ENST00000578205 CHRDL2Q6WN34 429 aa10.36□□□□□ -0.75
RHOT1-206ENST00000578205 ZBTB12Q9Y330 459 aaPredicted RBP10.36□□□□□ -0.75
RHOT1-206ENST00000578205 ZBTB22O15209 634 aa10.31□□□□□ -0.76
RHOT1-206ENST00000578205 AKT1S1Q96B36 256 aa10.28□□□□□ -0.76
RHOT1-206ENST00000578205 OSCARQ8IYS5 282 aa10.24□□□□□ -0.77
RHOT1-206ENST00000578205 ATXN8OSP0DMR3 200 aa10.2□□□□□ -0.78
RHOT1-206ENST00000578205 REM2Q8IYK8 340 aaPredicted RBP10.18□□□□□ -0.78
RHOT1-206ENST00000578205 PIP4P2Q8N4L2 257 aa10.08□□□□□ -0.8
RHOT1-206ENST00000578205 PITPNM1O00562 1244 aa10.07□□□□□ -0.8
RHOT1-206ENST00000578205 FBLN2P98095 1184 aa10.07□□□□□ -0.8
RHOT1-206ENST00000578205 SPDYE2BA6NHP3 402 aa10.03□□□□□ -0.8
RHOT1-206ENST00000578205 SPDYE6P0CI01 402 aa10.03□□□□□ -0.8
RHOT1-206ENST00000578205 SPDYE2Q495Y8 402 aa10.03□□□□□ -0.8
RHOT1-206ENST00000578205 SP7Q8TDD2 431 aaPredicted RBP10.01□□□□□ -0.81
RHOT1-206ENST00000578205 FXR2P51116 673 aaKnown RBP eCLIP10□□□□□ -0.81
RHOT1-206ENST00000578205 HAX1O00165 279 aa9.95□□□□□ -0.82
RHOT1-206ENST00000578205 MKRN4PQ13434 485 aaPredicted RBP9.94□□□□□ -0.82
RHOT1-206ENST00000578205 ZNF692Q9BU19 519 aaPredicted RBP9.9□□□□□ -0.83
RHOT1-206ENST00000578205 SPDYE1Q8NFV5 336 aaPredicted RBP9.88□□□□□ -0.83
RHOT1-206ENST00000578205 CLEC11AQ9Y240 323 aa9.88□□□□□ -0.83
RHOT1-206ENST00000578205 SSUH2Q9Y2M2 353 aa9.86□□□□□ -0.83
RHOT1-206ENST00000578205 PRKAR2AP13861 404 aaKnown RBP9.82□□□□□ -0.84
RHOT1-206ENST00000578205 EVX2Q03828 476 aa9.78□□□□□ -0.84
RHOT1-206ENST00000578205 CSRNP3Q8WYN3 585 aa9.75□□□□□ -0.85
RHOT1-206ENST00000578205 PABPN1Q86U42 306 aaKnown RBP eCLIP9.74□□□□□ -0.85
RHOT1-206ENST00000578205 PRR29P0C7W0 189 aa9.7□□□□□ -0.86
RHOT1-206ENST00000578205 CHADLQ6NUI6 762 aa9.69□□□□□ -0.86
RHOT1-206ENST00000578205 C19orf67A6NJJ6 358 aa9.68□□□□□ -0.86
RHOT1-206ENST00000578205 EHMT2Q96KQ7 1210 aa9.59□□□□□ -0.87
RHOT1-206ENST00000578205 GABBR2O75899 941 aa9.57□□□□□ -0.88
RHOT1-206ENST00000578205 FARP1Q9Y4F1 1045 aaPredicted RBP9.53□□□□□ -0.88
RHOT1-206ENST00000578205 CD44P16070 742 aaKnown RBP9.51□□□□□ -0.89
RHOT1-206ENST00000578205 STAG3Q9UJ98 1225 aa9.46□□□□□ -0.9
RHOT1-206ENST00000578205 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
RHOT1-206ENST00000578205 NISCHQ9Y2I1 1504 aa9.42□□□□□ -0.9
RHOT1-206ENST00000578205 CREBZFQ9NS37 354 aa9.41□□□□□ -0.9
RHOT1-206ENST00000578205 CLCN6P51797 869 aa9.4□□□□□ -0.9
RHOT1-206ENST00000578205 LHX8Q68G74 356 aa9.4□□□□□ -0.91
RHOT1-206ENST00000578205 ZRANB1Q9UGI0 708 aa9.36□□□□□ -0.91
RHOT1-206ENST00000578205 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
RHOT1-206ENST00000578205 ZNF579Q8NAF0 562 aaKnown RBP9.34□□□□□ -0.91
RHOT1-206ENST00000578205 DCBLD2Q96PD2 775 aa9.32□□□□□ -0.92
RHOT1-206ENST00000578205 PAK3O75914 559 aaPredicted RBP9.28□□□□□ -0.92
RHOT1-206ENST00000578205 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
RHOT1-206ENST00000578205 GALR2O43603 387 aaPredicted RBP9.24□□□□□ -0.93
RHOT1-206ENST00000578205 MNX1P50219 401 aaPredicted RBP9.22□□□□□ -0.93
RHOT1-206ENST00000578205 PHF12Q96QT6 1004 aa9.21□□□□□ -0.93
RHOT1-206ENST00000578205 PROM2Q8N271 834 aa9.17□□□□□ -0.94
RHOT1-206ENST00000578205 TSPYL2Q9H2G4 693 aaPredicted RBP9.09□□□□□ -0.95
RHOT1-206ENST00000578205 MS4A3Q96HJ5 214 aa9.08□□□□□ -0.96
RHOT1-206ENST00000578205 PLEKHG5O94827 1062 aa9.06□□□□□ -0.96
RHOT1-206ENST00000578205 PELP1Q8IZL8 1130 aaKnown RBP9.06□□□□□ -0.96
RHOT1-206ENST00000578205 POTEB2H3BUK9 544 aa9.04□□□□□ -0.96
RHOT1-206ENST00000578205 MIER1Q8N108 512 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms