RNA–Protein interactions for RNA: ENST00000578162.1

AC016839.1-201, humanhuman

BASIC

Gene AC016839.1, Length 867 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016839.1-201ENST00000578162 AEBP2Q6ZN18 517 aaPredicted RBP30.97■■■□□ 2.55
AC016839.1-201ENST00000578162 CHIC1Q5VXU3 224 aa29.23■■■□□ 2.27
AC016839.1-201ENST00000578162 SENP3Q9H4L4 574 aaPredicted RBP26.32■■□□□ 1.8
AC016839.1-201ENST00000578162 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
AC016839.1-201ENST00000578162 FOXD1Q16676 465 aa24.61■■□□□ 1.53
AC016839.1-201ENST00000578162 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
AC016839.1-201ENST00000578162 MSH5O43196 834 aa22.99■■□□□ 1.27
AC016839.1-201ENST00000578162 PPP6R1Q9UPN7 881 aa22.98■■□□□ 1.27
AC016839.1-201ENST00000578162 PIAS4Q8N2W9 510 aaPredicted RBP22.93■■□□□ 1.26
AC016839.1-201ENST00000578162 ADRA2BP18089 450 aa22.86■■□□□ 1.25
AC016839.1-201ENST00000578162 POTEDQ86YR6 584 aa22.7■■□□□ 1.22
AC016839.1-201ENST00000578162 MAPK8IP2Q13387 824 aaPredicted RBP21.05■□□□□ 0.96
AC016839.1-201ENST00000578162 DMRT2Q9Y5R5 561 aa20.89■□□□□ 0.93
AC016839.1-201ENST00000578162 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
AC016839.1-201ENST00000578162 PPP4R3CPQ6ZMV5 832 aa20.41■□□□□ 0.86
AC016839.1-201ENST00000578162 HOXD11P31277 338 aaPredicted RBP20.08■□□□□ 0.81
AC016839.1-201ENST00000578162 CNKSR2Q8WXI2 1034 aa20.02■□□□□ 0.8
AC016839.1-201ENST00000578162 DCAF8L1A6NGE4 600 aa19.99■□□□□ 0.79
AC016839.1-201ENST00000578162 RNF216Q9NWF9 866 aaPredicted RBP19.88■□□□□ 0.77
AC016839.1-201ENST00000578162 CACNB1Q02641 598 aaPredicted RBP19.8■□□□□ 0.76
AC016839.1-201ENST00000578162 RNF39Q9H2S5 420 aa19.67■□□□□ 0.74
AC016839.1-201ENST00000578162 NCBP3Q53F19 620 aaKnown RBP19.5■□□□□ 0.71
AC016839.1-201ENST00000578162 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
AC016839.1-201ENST00000578162 NPM3O75607 178 aaKnown RBP19.33■□□□□ 0.68
AC016839.1-201ENST00000578162 C1QBPQ07021 282 aaKnown RBP19.32■□□□□ 0.68
AC016839.1-201ENST00000578162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.64
AC016839.1-201ENST00000578162 KCNA4P22459 653 aa18.88■□□□□ 0.61
AC016839.1-201ENST00000578162 U3KPZ7 1027 aaPredicted RBP18.74■□□□□ 0.59
AC016839.1-201ENST00000578162 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
AC016839.1-201ENST00000578162 SPINK5Q9NQ38 1064 aaPredicted RBP18.52■□□□□ 0.56
AC016839.1-201ENST00000578162 CAPN15O75808 1086 aa18.41■□□□□ 0.54
AC016839.1-201ENST00000578162 DSG3P32926 999 aa18.39■□□□□ 0.53
AC016839.1-201ENST00000578162 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
AC016839.1-201ENST00000578162 APLP2Q06481 763 aa18.05■□□□□ 0.48
AC016839.1-201ENST00000578162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
AC016839.1-201ENST00000578162 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
AC016839.1-201ENST00000578162 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
AC016839.1-201ENST00000578162 ABCB7O75027 752 aa18.02■□□□□ 0.48
AC016839.1-201ENST00000578162 SAMD1Q6SPF0 538 aaPredicted RBP17.97■□□□□ 0.47
AC016839.1-201ENST00000578162 MYCNP04198 464 aaPredicted RBP17.83■□□□□ 0.44
AC016839.1-201ENST00000578162 POTEHQ6S545 545 aa17.75■□□□□ 0.43
AC016839.1-201ENST00000578162 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
AC016839.1-201ENST00000578162 POLA2Q14181 598 aa17.61■□□□□ 0.41
AC016839.1-201ENST00000578162 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
AC016839.1-201ENST00000578162 ATF5Q9Y2D1 282 aaPredicted RBP17.53■□□□□ 0.4
AC016839.1-201ENST00000578162 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
AC016839.1-201ENST00000578162 ZBTB22O15209 634 aa17.41■□□□□ 0.38
AC016839.1-201ENST00000578162 CHRDL2Q6WN34 429 aa17.18■□□□□ 0.34
AC016839.1-201ENST00000578162 ZBTB12Q9Y330 459 aaPredicted RBP17.17■□□□□ 0.34
AC016839.1-201ENST00000578162 OSCARQ8IYS5 282 aa17.08■□□□□ 0.32
AC016839.1-201ENST00000578162 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
AC016839.1-201ENST00000578162 ATXN8OSP0DMR3 200 aa17.03■□□□□ 0.32
AC016839.1-201ENST00000578162 REM2Q8IYK8 340 aaPredicted RBP16.94■□□□□ 0.3
AC016839.1-201ENST00000578162 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
AC016839.1-201ENST00000578162 PIP4P2Q8N4L2 257 aa16.77■□□□□ 0.28
AC016839.1-201ENST00000578162 FBLN2P98095 1184 aa16.71■□□□□ 0.27
AC016839.1-201ENST00000578162 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
AC016839.1-201ENST00000578162 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
AC016839.1-201ENST00000578162 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
AC016839.1-201ENST00000578162 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
AC016839.1-201ENST00000578162 FXR2P51116 673 aaKnown RBP eCLIP16.64■□□□□ 0.25
AC016839.1-201ENST00000578162 SP7Q8TDD2 431 aaPredicted RBP16.58■□□□□ 0.24
AC016839.1-201ENST00000578162 SSUH2Q9Y2M2 353 aa16.49■□□□□ 0.23
AC016839.1-201ENST00000578162 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
AC016839.1-201ENST00000578162 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
AC016839.1-201ENST00000578162 HAX1O00165 279 aa16.44■□□□□ 0.22
AC016839.1-201ENST00000578162 SPDYE1Q8NFV5 336 aaPredicted RBP16.39■□□□□ 0.21
AC016839.1-201ENST00000578162 CLEC11AQ9Y240 323 aa16.38■□□□□ 0.21
AC016839.1-201ENST00000578162 EVX2Q03828 476 aa16.34■□□□□ 0.21
AC016839.1-201ENST00000578162 PRKAR2AP13861 404 aaKnown RBP16.32■□□□□ 0.2
AC016839.1-201ENST00000578162 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
AC016839.1-201ENST00000578162 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
AC016839.1-201ENST00000578162 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
AC016839.1-201ENST00000578162 C19orf67A6NJJ6 358 aa16.12■□□□□ 0.17
AC016839.1-201ENST00000578162 PRR29P0C7W0 189 aa16.08■□□□□ 0.16
AC016839.1-201ENST00000578162 GABBR2O75899 941 aa15.9■□□□□ 0.14
AC016839.1-201ENST00000578162 FARP1Q9Y4F1 1045 aaPredicted RBP15.86■□□□□ 0.13
AC016839.1-201ENST00000578162 SPDYE4A6NLX3 237 aa15.79■□□□□ 0.12
AC016839.1-201ENST00000578162 CD44P16070 742 aaKnown RBP15.79■□□□□ 0.12
AC016839.1-201ENST00000578162 CREBZFQ9NS37 354 aa15.73■□□□□ 0.11
AC016839.1-201ENST00000578162 STAG3Q9UJ98 1225 aa15.69■□□□□ 0.1
AC016839.1-201ENST00000578162 POTEIP0CG38 1075 aa15.62■□□□□ 0.09
AC016839.1-201ENST00000578162 ZNF579Q8NAF0 562 aaKnown RBP15.55■□□□□ 0.08
AC016839.1-201ENST00000578162 LHX8Q68G74 356 aa15.54■□□□□ 0.08
AC016839.1-201ENST00000578162 ZRANB1Q9UGI0 708 aa15.54■□□□□ 0.08
AC016839.1-201ENST00000578162 CLCN6P51797 869 aa15.5■□□□□ 0.07
AC016839.1-201ENST00000578162 MNX1P50219 401 aaPredicted RBP15.48■□□□□ 0.07
AC016839.1-201ENST00000578162 PROM2Q8N271 834 aa15.45■□□□□ 0.06
AC016839.1-201ENST00000578162 GALR2O43603 387 aaPredicted RBP15.4■□□□□ 0.06
AC016839.1-201ENST00000578162 DCBLD2Q96PD2 775 aa15.39■□□□□ 0.05
AC016839.1-201ENST00000578162 PHF12Q96QT6 1004 aa15.36■□□□□ 0.05
AC016839.1-201ENST00000578162 NPM1P06748 294 aaKnown RBP eCLIP15.33■□□□□ 0.04
AC016839.1-201ENST00000578162 PAK3O75914 559 aaPredicted RBP15.32■□□□□ 0.04
AC016839.1-201ENST00000578162 MS4A3Q96HJ5 214 aa15.15■□□□□ 0.02
AC016839.1-201ENST00000578162 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
AC016839.1-201ENST00000578162 POTEB2H3BUK9 544 aa15.12■□□□□ 0.01
AC016839.1-201ENST00000578162 TSPYL2Q9H2G4 693 aaPredicted RBP15.12■□□□□ 0.01
AC016839.1-201ENST00000578162 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
AC016839.1-201ENST00000578162 ASTLQ6HA08 431 aaPredicted RBP15.05■□□□□ -0
AC016839.1-201ENST00000578162 MIER1Q8N108 512 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms