RNA–Protein interactions for RNA: ENST00000578162.1

AC016839.1-201, humanhuman

BASIC

Gene AC016839.1, Length 867 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016839.1-201ENST00000578162 AEBP2Q6ZN18 517 aaPredicted RBP30.97■■■□□ 2.55
AC016839.1-201ENST00000578162 CHIC1Q5VXU3 224 aa29.23■■■□□ 2.27
AC016839.1-201ENST00000578162 SENP3Q9H4L4 574 aaPredicted RBP26.32■■□□□ 1.8
AC016839.1-201ENST00000578162 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
AC016839.1-201ENST00000578162 FOXD1Q16676 465 aa24.61■■□□□ 1.53
AC016839.1-201ENST00000578162 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
AC016839.1-201ENST00000578162 MSH5O43196 834 aa22.99■■□□□ 1.27
AC016839.1-201ENST00000578162 PPP6R1Q9UPN7 881 aa22.98■■□□□ 1.27
AC016839.1-201ENST00000578162 PIAS4Q8N2W9 510 aaPredicted RBP22.93■■□□□ 1.26
AC016839.1-201ENST00000578162 ADRA2BP18089 450 aa22.86■■□□□ 1.25
AC016839.1-201ENST00000578162 POTEDQ86YR6 584 aa22.7■■□□□ 1.22
AC016839.1-201ENST00000578162 MAPK8IP2Q13387 824 aaPredicted RBP21.05■□□□□ 0.96
AC016839.1-201ENST00000578162 DMRT2Q9Y5R5 561 aa20.89■□□□□ 0.93
AC016839.1-201ENST00000578162 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
AC016839.1-201ENST00000578162 PPP4R3CPQ6ZMV5 832 aa20.41■□□□□ 0.86
AC016839.1-201ENST00000578162 HOXD11P31277 338 aaPredicted RBP20.08■□□□□ 0.81
AC016839.1-201ENST00000578162 CNKSR2Q8WXI2 1034 aa20.02■□□□□ 0.8
AC016839.1-201ENST00000578162 DCAF8L1A6NGE4 600 aa19.99■□□□□ 0.79
AC016839.1-201ENST00000578162 RNF216Q9NWF9 866 aaPredicted RBP19.88■□□□□ 0.77
AC016839.1-201ENST00000578162 CACNB1Q02641 598 aaPredicted RBP19.8■□□□□ 0.76
AC016839.1-201ENST00000578162 RNF39Q9H2S5 420 aa19.67■□□□□ 0.74
AC016839.1-201ENST00000578162 NCBP3Q53F19 620 aaKnown RBP19.5■□□□□ 0.71
AC016839.1-201ENST00000578162 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
AC016839.1-201ENST00000578162 NPM3O75607 178 aaKnown RBP19.33■□□□□ 0.68
AC016839.1-201ENST00000578162 C1QBPQ07021 282 aaKnown RBP19.32■□□□□ 0.68
AC016839.1-201ENST00000578162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.64
AC016839.1-201ENST00000578162 KCNA4P22459 653 aa18.88■□□□□ 0.61
AC016839.1-201ENST00000578162 U3KPZ7 1027 aaPredicted RBP18.74■□□□□ 0.59
AC016839.1-201ENST00000578162 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
AC016839.1-201ENST00000578162 SPINK5Q9NQ38 1064 aaPredicted RBP18.52■□□□□ 0.56
AC016839.1-201ENST00000578162 CAPN15O75808 1086 aa18.41■□□□□ 0.54
AC016839.1-201ENST00000578162 DSG3P32926 999 aa18.39■□□□□ 0.53
AC016839.1-201ENST00000578162 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
AC016839.1-201ENST00000578162 APLP2Q06481 763 aa18.05■□□□□ 0.48
AC016839.1-201ENST00000578162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
AC016839.1-201ENST00000578162 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
AC016839.1-201ENST00000578162 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
AC016839.1-201ENST00000578162 ABCB7O75027 752 aa18.02■□□□□ 0.48
AC016839.1-201ENST00000578162 SAMD1Q6SPF0 538 aaPredicted RBP17.97■□□□□ 0.47
AC016839.1-201ENST00000578162 MYCNP04198 464 aaPredicted RBP17.83■□□□□ 0.44
AC016839.1-201ENST00000578162 POTEHQ6S545 545 aa17.75■□□□□ 0.43
AC016839.1-201ENST00000578162 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
AC016839.1-201ENST00000578162 POLA2Q14181 598 aa17.61■□□□□ 0.41
AC016839.1-201ENST00000578162 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
AC016839.1-201ENST00000578162 ATF5Q9Y2D1 282 aaPredicted RBP17.53■□□□□ 0.4
AC016839.1-201ENST00000578162 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
AC016839.1-201ENST00000578162 ZBTB22O15209 634 aa17.41■□□□□ 0.38
AC016839.1-201ENST00000578162 CHRDL2Q6WN34 429 aa17.18■□□□□ 0.34
AC016839.1-201ENST00000578162 ZBTB12Q9Y330 459 aaPredicted RBP17.17■□□□□ 0.34
AC016839.1-201ENST00000578162 OSCARQ8IYS5 282 aa17.08■□□□□ 0.32
AC016839.1-201ENST00000578162 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
AC016839.1-201ENST00000578162 ATXN8OSP0DMR3 200 aa17.03■□□□□ 0.32
AC016839.1-201ENST00000578162 REM2Q8IYK8 340 aaPredicted RBP16.94■□□□□ 0.3
AC016839.1-201ENST00000578162 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
AC016839.1-201ENST00000578162 PIP4P2Q8N4L2 257 aa16.77■□□□□ 0.28
AC016839.1-201ENST00000578162 FBLN2P98095 1184 aa16.71■□□□□ 0.27
AC016839.1-201ENST00000578162 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
AC016839.1-201ENST00000578162 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
AC016839.1-201ENST00000578162 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
AC016839.1-201ENST00000578162 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
AC016839.1-201ENST00000578162 FXR2P51116 673 aaKnown RBP eCLIP16.64■□□□□ 0.25
AC016839.1-201ENST00000578162 SP7Q8TDD2 431 aaPredicted RBP16.58■□□□□ 0.24
AC016839.1-201ENST00000578162 SSUH2Q9Y2M2 353 aa16.49■□□□□ 0.23
AC016839.1-201ENST00000578162 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
AC016839.1-201ENST00000578162 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
AC016839.1-201ENST00000578162 HAX1O00165 279 aa16.44■□□□□ 0.22
AC016839.1-201ENST00000578162 SPDYE1Q8NFV5 336 aaPredicted RBP16.39■□□□□ 0.21
AC016839.1-201ENST00000578162 CLEC11AQ9Y240 323 aa16.38■□□□□ 0.21
AC016839.1-201ENST00000578162 EVX2Q03828 476 aa16.34■□□□□ 0.21
AC016839.1-201ENST00000578162 PRKAR2AP13861 404 aaKnown RBP16.32■□□□□ 0.2
AC016839.1-201ENST00000578162 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
AC016839.1-201ENST00000578162 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
AC016839.1-201ENST00000578162 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
AC016839.1-201ENST00000578162 C19orf67A6NJJ6 358 aa16.12■□□□□ 0.17
AC016839.1-201ENST00000578162 PRR29P0C7W0 189 aa16.08■□□□□ 0.16
AC016839.1-201ENST00000578162 GABBR2O75899 941 aa15.9■□□□□ 0.14
AC016839.1-201ENST00000578162 FARP1Q9Y4F1 1045 aaPredicted RBP15.86■□□□□ 0.13
AC016839.1-201ENST00000578162 SPDYE4A6NLX3 237 aa15.79■□□□□ 0.12
AC016839.1-201ENST00000578162 CD44P16070 742 aaKnown RBP15.79■□□□□ 0.12
AC016839.1-201ENST00000578162 CREBZFQ9NS37 354 aa15.73■□□□□ 0.11
AC016839.1-201ENST00000578162 STAG3Q9UJ98 1225 aa15.69■□□□□ 0.1
AC016839.1-201ENST00000578162 POTEIP0CG38 1075 aa15.62■□□□□ 0.09
AC016839.1-201ENST00000578162 ZNF579Q8NAF0 562 aaKnown RBP15.55■□□□□ 0.08
AC016839.1-201ENST00000578162 LHX8Q68G74 356 aa15.54■□□□□ 0.08
AC016839.1-201ENST00000578162 ZRANB1Q9UGI0 708 aa15.54■□□□□ 0.08
AC016839.1-201ENST00000578162 CLCN6P51797 869 aa15.5■□□□□ 0.07
AC016839.1-201ENST00000578162 MNX1P50219 401 aaPredicted RBP15.48■□□□□ 0.07
AC016839.1-201ENST00000578162 PROM2Q8N271 834 aa15.45■□□□□ 0.06
AC016839.1-201ENST00000578162 GALR2O43603 387 aaPredicted RBP15.4■□□□□ 0.06
AC016839.1-201ENST00000578162 DCBLD2Q96PD2 775 aa15.39■□□□□ 0.05
AC016839.1-201ENST00000578162 PHF12Q96QT6 1004 aa15.36■□□□□ 0.05
AC016839.1-201ENST00000578162 NPM1P06748 294 aaKnown RBP eCLIP15.33■□□□□ 0.04
AC016839.1-201ENST00000578162 PAK3O75914 559 aaPredicted RBP15.32■□□□□ 0.04
AC016839.1-201ENST00000578162 MS4A3Q96HJ5 214 aa15.15■□□□□ 0.02
AC016839.1-201ENST00000578162 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
AC016839.1-201ENST00000578162 POTEB2H3BUK9 544 aa15.12■□□□□ 0.01
AC016839.1-201ENST00000578162 TSPYL2Q9H2G4 693 aaPredicted RBP15.12■□□□□ 0.01
AC016839.1-201ENST00000578162 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
AC016839.1-201ENST00000578162 ASTLQ6HA08 431 aaPredicted RBP15.05■□□□□ -0
AC016839.1-201ENST00000578162 MIER1Q8N108 512 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms