RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
COPS3-213ENST00000577210 CHIC1Q5VXU3 224 aa12.86□□□□□ -0.35
COPS3-213ENST00000577210 SENP3Q9H4L4 574 aaPredicted RBP11.47□□□□□ -0.57
COPS3-213ENST00000577210 PHF23Q9BUL5 403 aaPredicted RBP11.34□□□□□ -0.59
COPS3-213ENST00000577210 POTEDQ86YR6 584 aa10.88□□□□□ -0.67
COPS3-213ENST00000577210 FOXD1Q16676 465 aa10.73□□□□□ -0.69
COPS3-213ENST00000577210 PLPPR3Q6T4P5 718 aa10.27□□□□□ -0.77
COPS3-213ENST00000577210 MSH5O43196 834 aa10.16□□□□□ -0.78
COPS3-213ENST00000577210 PPP6R1Q9UPN7 881 aa10.09□□□□□ -0.79
COPS3-213ENST00000577210 ADRA2BP18089 450 aa10.06□□□□□ -0.8
COPS3-213ENST00000577210 PIAS4Q8N2W9 510 aaPredicted RBP10.03□□□□□ -0.8
COPS3-213ENST00000577210 MAPK8IP2Q13387 824 aaPredicted RBP9.23□□□□□ -0.93
COPS3-213ENST00000577210 DMRT2Q9Y5R5 561 aa9.12□□□□□ -0.95
COPS3-213ENST00000577210 SCAF1Q9H7N4 1312 aaKnown RBP9.09□□□□□ -0.95
COPS3-213ENST00000577210 CACNB1Q02641 598 aaPredicted RBP9.06□□□□□ -0.96
COPS3-213ENST00000577210 PPP4R3CPQ6ZMV5 832 aa9.04□□□□□ -0.96
COPS3-213ENST00000577210 CNKSR2Q8WXI2 1034 aa8.83□□□□□ -1
COPS3-213ENST00000577210 HOXD11P31277 338 aaPredicted RBP8.8□□□□□ -1
COPS3-213ENST00000577210 DCAF8L1A6NGE4 600 aa8.75□□□□□ -1.01
COPS3-213ENST00000577210 RNF216Q9NWF9 866 aaPredicted RBP8.74□□□□□ -1.01
COPS3-213ENST00000577210 NCBP3Q53F19 620 aaKnown RBP8.65□□□□□ -1.02
COPS3-213ENST00000577210 NPM3O75607 178 aaKnown RBP8.6□□□□□ -1.03
COPS3-213ENST00000577210 RNF39Q9H2S5 420 aa8.59□□□□□ -1.03
COPS3-213ENST00000577210 KCNA4P22459 653 aa8.51□□□□□ -1.05
COPS3-213ENST00000577210 C1QBPQ07021 282 aaKnown RBP8.46□□□□□ -1.06
COPS3-213ENST00000577210 DNAJC5BQ9UF47 199 aa8.43□□□□□ -1.06
COPS3-213ENST00000577210 POTEHQ6S545 545 aa8.42□□□□□ -1.06
COPS3-213ENST00000577210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.37□□□□□ -1.07
COPS3-213ENST00000577210 U3KPZ7 1027 aaPredicted RBP8.25□□□□□ -1.09
COPS3-213ENST00000577210 SLC4A2P04920 1241 aa8.21□□□□□ -1.1
COPS3-213ENST00000577210 SPINK5Q9NQ38 1064 aaPredicted RBP8.13□□□□□ -1.11
COPS3-213ENST00000577210 SLC4A1APQ9BWU0 796 aaKnown RBP8.09□□□□□ -1.11
COPS3-213ENST00000577210 CAPN15O75808 1086 aa8.07□□□□□ -1.12
COPS3-213ENST00000577210 DSG3P32926 999 aa8.02□□□□□ -1.13
COPS3-213ENST00000577210 TRHP20396 242 aaPredicted RBP7.96□□□□□ -1.14
COPS3-213ENST00000577210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.94□□□□□ -1.14
COPS3-213ENST00000577210 HNRNPUL2Q1KMD3 747 aaKnown RBP7.94□□□□□ -1.14
COPS3-213ENST00000577210 EHMT2Q96KQ7 1210 aa7.94□□□□□ -1.14
COPS3-213ENST00000577210 ABCB7O75027 752 aa7.93□□□□□ -1.14
COPS3-213ENST00000577210 MYCNP04198 464 aaPredicted RBP7.92□□□□□ -1.14
COPS3-213ENST00000577210 SAMD1Q6SPF0 538 aaPredicted RBP7.92□□□□□ -1.14
COPS3-213ENST00000577210 APLP2Q06481 763 aa7.91□□□□□ -1.14
COPS3-213ENST00000577210 ZNF219Q9P2Y4 722 aaPredicted RBP7.91□□□□□ -1.14
COPS3-213ENST00000577210 FOXD4L1Q9NU39 408 aa7.88□□□□□ -1.15
COPS3-213ENST00000577210 ZBTB22O15209 634 aa7.86□□□□□ -1.15
COPS3-213ENST00000577210 ATF5Q9Y2D1 282 aaPredicted RBP7.8□□□□□ -1.16
COPS3-213ENST00000577210 CSRNP3Q8WYN3 585 aa7.78□□□□□ -1.16
COPS3-213ENST00000577210 POLA2Q14181 598 aa7.75□□□□□ -1.17
COPS3-213ENST00000577210 SP7Q8TDD2 431 aaPredicted RBP7.62□□□□□ -1.19
COPS3-213ENST00000577210 ATXN8OSP0DMR3 200 aa7.59□□□□□ -1.19
COPS3-213ENST00000577210 RBM42Q9BTD8 480 aaKnown RBP7.59□□□□□ -1.19
COPS3-213ENST00000577210 CHRDL2Q6WN34 429 aa7.57□□□□□ -1.2
COPS3-213ENST00000577210 OSCARQ8IYS5 282 aa7.55□□□□□ -1.2
COPS3-213ENST00000577210 ZBTB12Q9Y330 459 aaPredicted RBP7.55□□□□□ -1.2
COPS3-213ENST00000577210 AKT1S1Q96B36 256 aa7.45□□□□□ -1.22
COPS3-213ENST00000577210 MKRN4PQ13434 485 aaPredicted RBP7.44□□□□□ -1.22
COPS3-213ENST00000577210 FBLN2P98095 1184 aa7.41□□□□□ -1.22
COPS3-213ENST00000577210 REM2Q8IYK8 340 aaPredicted RBP7.41□□□□□ -1.22
COPS3-213ENST00000577210 PITPNM1O00562 1244 aa7.36□□□□□ -1.23
COPS3-213ENST00000577210 SPDYE2BA6NHP3 402 aa7.34□□□□□ -1.23
COPS3-213ENST00000577210 SPDYE6P0CI01 402 aa7.34□□□□□ -1.23
COPS3-213ENST00000577210 SPDYE2Q495Y8 402 aa7.34□□□□□ -1.23
COPS3-213ENST00000577210 HAX1O00165 279 aa7.31□□□□□ -1.24
COPS3-213ENST00000577210 PIP4P2Q8N4L2 257 aa7.3□□□□□ -1.24
COPS3-213ENST00000577210 SSUH2Q9Y2M2 353 aa7.29□□□□□ -1.24
COPS3-213ENST00000577210 ZNF692Q9BU19 519 aaPredicted RBP7.27□□□□□ -1.25
COPS3-213ENST00000577210 FXR2P51116 673 aaKnown RBP eCLIP7.24□□□□□ -1.25
COPS3-213ENST00000577210 CLEC11AQ9Y240 323 aa7.21□□□□□ -1.26
COPS3-213ENST00000577210 SPDYE1Q8NFV5 336 aaPredicted RBP7.2□□□□□ -1.26
COPS3-213ENST00000577210 PABPN1Q86U42 306 aaKnown RBP eCLIP7.19□□□□□ -1.26
COPS3-213ENST00000577210 PLSCR2Q9NRY7 297 aa7.17□□□□□ -1.26
COPS3-213ENST00000577210 LHX8Q68G74 356 aa7.15□□□□□ -1.26
COPS3-213ENST00000577210 PRKAR2AP13861 404 aaKnown RBP7.14□□□□□ -1.27
COPS3-213ENST00000577210 EVX2Q03828 476 aa7.13□□□□□ -1.27
COPS3-213ENST00000577210 CHADLQ6NUI6 762 aa7.11□□□□□ -1.27
COPS3-213ENST00000577210 SPDYE4A6NLX3 237 aa7.07□□□□□ -1.28
COPS3-213ENST00000577210 PRR29P0C7W0 189 aa7.07□□□□□ -1.28
COPS3-213ENST00000577210 FKBP8Q14318 412 aa7.07□□□□□ -1.28
COPS3-213ENST00000577210 C19orf67A6NJJ6 358 aa7.02□□□□□ -1.29
COPS3-213ENST00000577210 GABBR2O75899 941 aa6.97□□□□□ -1.29
COPS3-213ENST00000577210 FARP1Q9Y4F1 1045 aaPredicted RBP6.97□□□□□ -1.29
COPS3-213ENST00000577210 CREBZFQ9NS37 354 aa6.96□□□□□ -1.3
COPS3-213ENST00000577210 FBXO3Q9UK99 471 aa6.95□□□□□ -1.3
COPS3-213ENST00000577210 STAG3Q9UJ98 1225 aa6.93□□□□□ -1.3
COPS3-213ENST00000577210 CD44P16070 742 aaKnown RBP6.92□□□□□ -1.3
COPS3-213ENST00000577210 PROM2Q8N271 834 aa6.92□□□□□ -1.3
COPS3-213ENST00000577210 MNX1P50219 401 aaPredicted RBP6.85□□□□□ -1.31
COPS3-213ENST00000577210 ZRANB1Q9UGI0 708 aa6.82□□□□□ -1.32
COPS3-213ENST00000577210 AMER1Q5JTC6 1135 aaPredicted RBP6.81□□□□□ -1.32
COPS3-213ENST00000577210 ZNF579Q8NAF0 562 aaKnown RBP6.81□□□□□ -1.32
COPS3-213ENST00000577210 POTEIP0CG38 1075 aa6.79□□□□□ -1.32
COPS3-213ENST00000577210 PHF12Q96QT6 1004 aa6.78□□□□□ -1.32
COPS3-213ENST00000577210 GALR2O43603 387 aaPredicted RBP6.76□□□□□ -1.33
COPS3-213ENST00000577210 NPM1P06748 294 aaKnown RBP eCLIP6.76□□□□□ -1.33
COPS3-213ENST00000577210 POTEMA6NI47 508 aa6.75□□□□□ -1.33
COPS3-213ENST00000577210 PAK3O75914 559 aaPredicted RBP6.74□□□□□ -1.33
COPS3-213ENST00000577210 PLEKHG5O94827 1062 aa6.73□□□□□ -1.33
COPS3-213ENST00000577210 VASPP50552 380 aaPredicted RBP6.73□□□□□ -1.33
COPS3-213ENST00000577210 CLCN6P51797 869 aa6.73□□□□□ -1.33
COPS3-213ENST00000577210 PCDH10Q9P2E7 1040 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms