RNA–Protein interactions for RNA: ENST00000576084.5

COX11-208, Transcript of cytochrome c oxidase copper chaperone COX11, human

TSL 3

Gene COX11, Length 652 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COX11-208	ENST00000576084	AEBP2	Q6ZN18	517 aa	Predicted RBP	20.71	■□□□□ 0.91
COX11-208	ENST00000576084	CHIC1	Q5VXU3	224 aa		19.9	■□□□□ 0.78
COX11-208	ENST00000576084	SENP3	Q9H4L4	574 aa	Predicted RBP	17.71	■□□□□ 0.43
COX11-208	ENST00000576084	PHF23	Q9BUL5	403 aa	Predicted RBP	17.56	■□□□□ 0.4
COX11-208	ENST00000576084	FOXD1	Q16676	465 aa		16.55	■□□□□ 0.24
COX11-208	ENST00000576084	PLPPR3	Q6T4P5	718 aa		16.06	■□□□□ 0.16
COX11-208	ENST00000576084	POTED	Q86YR6	584 aa		15.79	■□□□□ 0.12
COX11-208	ENST00000576084	MSH5	O43196	834 aa		15.61	■□□□□ 0.09
COX11-208	ENST00000576084	PPP6R1	Q9UPN7	881 aa		15.52	■□□□□ 0.08
COX11-208	ENST00000576084	ADRA2B	P18089	450 aa		15.45	■□□□□ 0.06
COX11-208	ENST00000576084	PIAS4	Q8N2W9	510 aa	Predicted RBP	15.37	■□□□□ 0.05
COX11-208	ENST00000576084	PPP4R3CP	Q6ZMV5	832 aa		14.17	□□□□□ -0.14
COX11-208	ENST00000576084	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.07	□□□□□ -0.16
COX11-208	ENST00000576084	SCAF1	Q9H7N4	1312 aa	Known RBP	14.01	□□□□□ -0.17
COX11-208	ENST00000576084	DMRT2	Q9Y5R5	561 aa		14	□□□□□ -0.17
COX11-208	ENST00000576084	CNKSR2	Q8WXI2	1034 aa		13.77	□□□□□ -0.21
COX11-208	ENST00000576084	KCNA4	P22459	653 aa		13.76	□□□□□ -0.21
COX11-208	ENST00000576084	NCBP3	Q53F19	620 aa	Known RBP	13.69	□□□□□ -0.22
COX11-208	ENST00000576084	NPM3	O75607	178 aa	Known RBP	13.59	□□□□□ -0.23
COX11-208	ENST00000576084	CACNB1	Q02641	598 aa	Predicted RBP	13.59	□□□□□ -0.23
COX11-208	ENST00000576084	HOXD11	P31277	338 aa	Predicted RBP	13.55	□□□□□ -0.24
COX11-208	ENST00000576084	RNF216	Q9NWF9	866 aa	Predicted RBP	13.54	□□□□□ -0.24
COX11-208	ENST00000576084	DCAF8L1	A6NGE4	600 aa		13.41	□□□□□ -0.26
COX11-208	ENST00000576084	RNF39	Q9H2S5	420 aa		13.3	□□□□□ -0.28
COX11-208	ENST00000576084	DNAJC5B	Q9UF47	199 aa		13.26	□□□□□ -0.29
COX11-208	ENST00000576084	C1QBP	Q07021	282 aa	Known RBP	13.09	□□□□□ -0.31
COX11-208	ENST00000576084	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.02	□□□□□ -0.33
COX11-208	ENST00000576084	SLC4A2	P04920	1241 aa		12.9	□□□□□ -0.34
COX11-208	ENST00000576084	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
COX11-208	ENST00000576084	ZBTB22	O15209	634 aa		12.72	□□□□□ -0.37
COX11-208	ENST00000576084		U3KPZ7	1027 aa	Predicted RBP	12.69	□□□□□ -0.38
COX11-208	ENST00000576084	FOXD4L1	Q9NU39	408 aa		12.64	□□□□□ -0.39
COX11-208	ENST00000576084	CSRNP3	Q8WYN3	585 aa		12.53	□□□□□ -0.4
COX11-208	ENST00000576084	EHMT2	Q96KQ7	1210 aa		12.53	□□□□□ -0.4
COX11-208	ENST00000576084	MYCN	P04198	464 aa	Predicted RBP	12.5	□□□□□ -0.41
COX11-208	ENST00000576084	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.37	□□□□□ -0.43
COX11-208	ENST00000576084	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.37	□□□□□ -0.43
COX11-208	ENST00000576084	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.36	□□□□□ -0.43
COX11-208	ENST00000576084	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.36	□□□□□ -0.43
COX11-208	ENST00000576084	DSG3	P32926	999 aa		12.34	□□□□□ -0.43
COX11-208	ENST00000576084	CAPN15	O75808	1086 aa		12.32	□□□□□ -0.44
COX11-208	ENST00000576084	POTEH	Q6S545	545 aa		12.31	□□□□□ -0.44
COX11-208	ENST00000576084	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.28	□□□□□ -0.44
COX11-208	ENST00000576084	APLP2	Q06481	763 aa		12.23	□□□□□ -0.45
COX11-208	ENST00000576084	ATXN8OS	P0DMR3	200 aa		12.22	□□□□□ -0.45
COX11-208	ENST00000576084	TRH	P20396	242 aa	Predicted RBP	12.16	□□□□□ -0.46
COX11-208	ENST00000576084	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.14	□□□□□ -0.47
COX11-208	ENST00000576084	ABCB7	O75027	752 aa		12.02	□□□□□ -0.49
COX11-208	ENST00000576084	POLA2	Q14181	598 aa		11.97	□□□□□ -0.49
COX11-208	ENST00000576084	RBM42	Q9BTD8	480 aa	Known RBP	11.78	□□□□□ -0.52
COX11-208	ENST00000576084	MKRN4P	Q13434	485 aa	Predicted RBP	11.74	□□□□□ -0.53
COX11-208	ENST00000576084	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.7	□□□□□ -0.54
COX11-208	ENST00000576084	CHRDL2	Q6WN34	429 aa		11.65	□□□□□ -0.54
COX11-208	ENST00000576084	FBLN2	P98095	1184 aa		11.62	□□□□□ -0.55
COX11-208	ENST00000576084	OSCAR	Q8IYS5	282 aa		11.57	□□□□□ -0.56
COX11-208	ENST00000576084	AKT1S1	Q96B36	256 aa		11.45	□□□□□ -0.58
COX11-208	ENST00000576084	SPDYE2B	A6NHP3	402 aa		11.43	□□□□□ -0.58
COX11-208	ENST00000576084	SPDYE6	P0CI01	402 aa		11.43	□□□□□ -0.58
COX11-208	ENST00000576084	SPDYE2	Q495Y8	402 aa		11.43	□□□□□ -0.58
COX11-208	ENST00000576084	SP7	Q8TDD2	431 aa	Predicted RBP	11.39	□□□□□ -0.59
COX11-208	ENST00000576084	SSUH2	Q9Y2M2	353 aa		11.39	□□□□□ -0.59
COX11-208	ENST00000576084	ZNF692	Q9BU19	519 aa	Predicted RBP	11.35	□□□□□ -0.59
COX11-208	ENST00000576084	SPDYE4	A6NLX3	237 aa		11.33	□□□□□ -0.6
COX11-208	ENST00000576084	REM2	Q8IYK8	340 aa	Predicted RBP	11.33	□□□□□ -0.6
COX11-208	ENST00000576084	PIP4P2	Q8N4L2	257 aa		11.31	□□□□□ -0.6
COX11-208	ENST00000576084	FKBP8	Q14318	412 aa		11.25	□□□□□ -0.61
COX11-208	ENST00000576084	PROM2	Q8N271	834 aa		11.23	□□□□□ -0.61
COX11-208	ENST00000576084	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
COX11-208	ENST00000576084	PITPNM1	O00562	1244 aa		11.21	□□□□□ -0.61
COX11-208	ENST00000576084	FXR2	P51116	673 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
COX11-208	ENST00000576084	HAX1	O00165	279 aa		11.18	□□□□□ -0.62
COX11-208	ENST00000576084	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.09	□□□□□ -0.63
COX11-208	ENST00000576084	EVX2	Q03828	476 aa		11.03	□□□□□ -0.64
COX11-208	ENST00000576084	CLEC11A	Q9Y240	323 aa		11.03	□□□□□ -0.64
COX11-208	ENST00000576084	STAG3	Q9UJ98	1225 aa		10.97	□□□□□ -0.65
COX11-208	ENST00000576084	PRR29	P0C7W0	189 aa		10.93	□□□□□ -0.66
COX11-208	ENST00000576084	PRKAR2A	P13861	404 aa	Known RBP	10.92	□□□□□ -0.66
COX11-208	ENST00000576084	C19orf67	A6NJJ6	358 aa		10.85	□□□□□ -0.67
COX11-208	ENST00000576084	CREBZF	Q9NS37	354 aa		10.85	□□□□□ -0.67
COX11-208	ENST00000576084	CHADL	Q6NUI6	762 aa		10.83	□□□□□ -0.68
COX11-208	ENST00000576084	FBXO3	Q9UK99	471 aa		10.83	□□□□□ -0.68
COX11-208	ENST00000576084	GABBR2	O75899	941 aa		10.77	□□□□□ -0.69
COX11-208	ENST00000576084	MNX1	P50219	401 aa	Predicted RBP	10.77	□□□□□ -0.69
COX11-208	ENST00000576084	VASP	P50552	380 aa	Predicted RBP	10.74	□□□□□ -0.69
COX11-208	ENST00000576084	MIER1	Q8N108	512 aa		10.72	□□□□□ -0.69
COX11-208	ENST00000576084	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.72	□□□□□ -0.69
COX11-208	ENST00000576084	LHX8	Q68G74	356 aa		10.68	□□□□□ -0.7
COX11-208	ENST00000576084	PLCD3	Q8N3E9	789 aa		10.67	□□□□□ -0.7
COX11-208	ENST00000576084	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.64	□□□□□ -0.71
COX11-208	ENST00000576084	PLEKHG5	O94827	1062 aa		10.58	□□□□□ -0.72
COX11-208	ENST00000576084	NPM1	P06748	294 aa	Known RBP eCLIP	10.56	□□□□□ -0.72
COX11-208	ENST00000576084	NUBP1	P53384	320 aa		10.56	□□□□□ -0.72
COX11-208	ENST00000576084	CD44	P16070	742 aa	Known RBP	10.55	□□□□□ -0.72
COX11-208	ENST00000576084	POTEI	P0CG38	1075 aa		10.54	□□□□□ -0.72
COX11-208	ENST00000576084	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.54	□□□□□ -0.72
COX11-208	ENST00000576084	RASEF	Q8IZ41	740 aa		10.52	□□□□□ -0.73
COX11-208	ENST00000576084	KLHL34	Q8N239	644 aa		10.51	□□□□□ -0.73
COX11-208	ENST00000576084	CLCN6	P51797	869 aa		10.5	□□□□□ -0.73
COX11-208	ENST00000576084	SPOCK2	Q92563	424 aa		10.46	□□□□□ -0.73
COX11-208	ENST00000576084	ZRANB1	Q9UGI0	708 aa		10.43	□□□□□ -0.74

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