RNA–Protein interactions for RNA: ENST00000575978.1

EIF4A3-206, Transcript of eukaryotic translation initiation factor 4A3, humanhuman

TSL 2

Gene EIF4A3, Length 3,593 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A3-206ENST00000575978 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.3
EIF4A3-206ENST00000575978 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
EIF4A3-206ENST00000575978 SHROOM4Q9ULL8 1493 aa14.48□□□□□ -0.09
EIF4A3-206ENST00000575978 ZCCHC6Q5VYS8 1495 aaKnown RBP14.32□□□□□ -0.12
EIF4A3-206ENST00000575978 CCDC180Q9P1Z9 1646 aa14.29□□□□□ -0.12
EIF4A3-206ENST00000575978 SUPT5HO00267 1087 aaKnown RBP14.26□□□□□ -0.13
EIF4A3-206ENST00000575978 MYO15BQ96JP2 1530 aa13.97□□□□□ -0.17
EIF4A3-206ENST00000575978 CHIC1Q5VXU3 224 aa13.86□□□□□ -0.19
EIF4A3-206ENST00000575978 DCAF1Q9Y4B6 1507 aa13.81□□□□□ -0.2
EIF4A3-206ENST00000575978 SLC24A1O60721 1099 aa13.54□□□□□ -0.24
EIF4A3-206ENST00000575978 ABCC9O60706 1549 aa13.53□□□□□ -0.24
EIF4A3-206ENST00000575978 HRCP23327 699 aa13.52□□□□□ -0.24
EIF4A3-206ENST00000575978 LOC105371045A0A1W2PR82 267 aa13.51□□□□□ -0.25
EIF4A3-206ENST00000575978 SCRIBQ14160 1630 aa13.47□□□□□ -0.25
EIF4A3-206ENST00000575978 PCGF6Q9BYE7 350 aa13.47□□□□□ -0.25
EIF4A3-206ENST00000575978 RSF1Q96T23 1441 aaPredicted RBP13.42□□□□□ -0.26
EIF4A3-206ENST00000575978 PPARGC1BQ86YN6 1023 aaKnown RBP13.36□□□□□ -0.27
EIF4A3-206ENST00000575978 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
EIF4A3-206ENST00000575978 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
EIF4A3-206ENST00000575978 FAM9AQ8IZU1 332 aaPredicted RBP13.27□□□□□ -0.29
EIF4A3-206ENST00000575978 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
EIF4A3-206ENST00000575978 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
EIF4A3-206ENST00000575978 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
EIF4A3-206ENST00000575978 NACADO15069 1562 aa13.16□□□□□ -0.3
EIF4A3-206ENST00000575978 WIZO95785 1651 aa13.15□□□□□ -0.3
EIF4A3-206ENST00000575978 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
EIF4A3-206ENST00000575978 EIF4G1Q04637 1599 aaKnown RBP13.05□□□□□ -0.32
EIF4A3-206ENST00000575978 PABPN1Q86U42 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
EIF4A3-206ENST00000575978 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
EIF4A3-206ENST00000575978 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
EIF4A3-206ENST00000575978 UNC13AQ9UPW8 1703 aa12.94□□□□□ -0.34
EIF4A3-206ENST00000575978 ABCC8Q09428 1581 aa12.88□□□□□ -0.35
EIF4A3-206ENST00000575978 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
EIF4A3-206ENST00000575978 MYT1Q01538 1121 aa12.85□□□□□ -0.35
EIF4A3-206ENST00000575978 TOP2AP11388 1531 aaKnown RBP12.85□□□□□ -0.35
EIF4A3-206ENST00000575978 CCDC88BA6NC98 1476 aa12.84□□□□□ -0.35
EIF4A3-206ENST00000575978 SMARCA2P51531 1590 aa12.84□□□□□ -0.35
EIF4A3-206ENST00000575978 TTBK1Q5TCY1 1321 aaPredicted RBP12.81□□□□□ -0.36
EIF4A3-206ENST00000575978 UBTFP17480 764 aaKnown RBP12.8□□□□□ -0.36
EIF4A3-206ENST00000575978 ZEB1P37275 1124 aaPredicted RBP12.75□□□□□ -0.37
EIF4A3-206ENST00000575978 SOGA1O94964 1423 aa12.75□□□□□ -0.37
EIF4A3-206ENST00000575978 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
EIF4A3-206ENST00000575978 BICRAQ9NZM4 1560 aa12.74□□□□□ -0.37
EIF4A3-206ENST00000575978 RANGAP1P46060 587 aaPredicted RBP12.72□□□□□ -0.37
EIF4A3-206ENST00000575978 APLP2Q06481 763 aa12.69□□□□□ -0.38
EIF4A3-206ENST00000575978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
EIF4A3-206ENST00000575978 CEP162Q5TB80 1403 aa12.66□□□□□ -0.38
EIF4A3-206ENST00000575978 WRNQ14191 1432 aaPredicted RBP eCLIP12.65□□□□□ -0.38
EIF4A3-206ENST00000575978 PEG3Q9GZU2 1588 aa12.61□□□□□ -0.39
EIF4A3-206ENST00000575978 TNIKQ9UKE5 1360 aa12.6□□□□□ -0.39
EIF4A3-206ENST00000575978 SYNJ1O43426 1573 aa12.58□□□□□ -0.39
EIF4A3-206ENST00000575978 CCER1Q8TC90 406 aaPredicted RBP12.58□□□□□ -0.4
EIF4A3-206ENST00000575978 SCAF1Q9H7N4 1312 aaKnown RBP12.58□□□□□ -0.4
EIF4A3-206ENST00000575978 CSRNP3Q8WYN3 585 aa12.56□□□□□ -0.4
EIF4A3-206ENST00000575978 EEA1Q15075 1411 aa12.52□□□□□ -0.41
EIF4A3-206ENST00000575978 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
EIF4A3-206ENST00000575978 GOLGA3Q08378 1498 aa12.49□□□□□ -0.41
EIF4A3-206ENST00000575978 KIF21BO75037 1637 aa12.46□□□□□ -0.42
EIF4A3-206ENST00000575978 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
EIF4A3-206ENST00000575978 RAPGEF2Q9Y4G8 1499 aa12.42□□□□□ -0.42
EIF4A3-206ENST00000575978 BAZ1BQ9UIG0 1483 aaKnown RBP12.41□□□□□ -0.42
EIF4A3-206ENST00000575978 CEP164Q9UPV0 1460 aa12.41□□□□□ -0.42
EIF4A3-206ENST00000575978 NEUROD1Q13562 356 aa12.39□□□□□ -0.43
EIF4A3-206ENST00000575978 ATP1B4Q9UN42 357 aaPredicted RBP12.38□□□□□ -0.43
EIF4A3-206ENST00000575978 CLIP1P30622 1438 aa12.37□□□□□ -0.43
EIF4A3-206ENST00000575978 DIEXFQ68CQ4 756 aaKnown RBP12.36□□□□□ -0.43
EIF4A3-206ENST00000575978 TOP2BQ02880 1626 aa12.36□□□□□ -0.43
EIF4A3-206ENST00000575978 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
EIF4A3-206ENST00000575978 VPS8Q8N3P4 1428 aa12.34□□□□□ -0.43
EIF4A3-206ENST00000575978 ACIN1Q9UKV3 1341 aaKnown RBP12.33□□□□□ -0.43
EIF4A3-206ENST00000575978 BIVM-ERCC5R4GMW8 1640 aa12.33□□□□□ -0.44
EIF4A3-206ENST00000575978 CUX1P39880 1505 aa12.27□□□□□ -0.45
EIF4A3-206ENST00000575978 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
EIF4A3-206ENST00000575978 ARAP1Q96P48 1450 aa12.26□□□□□ -0.45
EIF4A3-206ENST00000575978 PRXQ9BXM0 1461 aa12.26□□□□□ -0.45
EIF4A3-206ENST00000575978 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
EIF4A3-206ENST00000575978 ITGAEP38570 1179 aa12.23□□□□□ -0.45
EIF4A3-206ENST00000575978 ERICH3Q5RHP9 1530 aa12.22□□□□□ -0.45
EIF4A3-206ENST00000575978 NCAPD3P42695 1498 aa12.21□□□□□ -0.46
EIF4A3-206ENST00000575978 HMGXB3Q12766 1538 aa12.21□□□□□ -0.46
EIF4A3-206ENST00000575978 KANK4Q5T7N3 995 aaPredicted RBP12.2□□□□□ -0.46
EIF4A3-206ENST00000575978 GTF3C3Q9Y5Q9 886 aa12.2□□□□□ -0.46
EIF4A3-206ENST00000575978 DAXXQ9UER7 740 aaPredicted RBP12.18□□□□□ -0.46
EIF4A3-206ENST00000575978 MIER1Q8N108 512 aa12.18□□□□□ -0.46
EIF4A3-206ENST00000575978 CFTRP13569 1480 aa12.15□□□□□ -0.46
EIF4A3-206ENST00000575978 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
EIF4A3-206ENST00000575978 ARHGAP35Q9NRY4 1499 aa12.12□□□□□ -0.47
EIF4A3-206ENST00000575978 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
EIF4A3-206ENST00000575978 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
EIF4A3-206ENST00000575978 PRKCSHP14314 528 aaPredicted RBP12.09□□□□□ -0.47
EIF4A3-206ENST00000575978 KIF27Q86VH2 1401 aa12.09□□□□□ -0.47
EIF4A3-206ENST00000575978 CENPBP07199 599 aaPredicted RBP12.09□□□□□ -0.47
EIF4A3-206ENST00000575978 PRDM2Q13029 1718 aa12.09□□□□□ -0.47
EIF4A3-206ENST00000575978 RRBP1Q9P2E9 1410 aaKnown RBP12.09□□□□□ -0.47
EIF4A3-206ENST00000575978 FAM50AQ14320 339 aaKnown RBP12.05□□□□□ -0.48
EIF4A3-206ENST00000575978 IGF1RP08069 1367 aa12.04□□□□□ -0.48
EIF4A3-206ENST00000575978 CUX2O14529 1486 aa12.04□□□□□ -0.48
EIF4A3-206ENST00000575978 FGD5Q6ZNL6 1462 aa11.99□□□□□ -0.49
EIF4A3-206ENST00000575978 CCNB3Q8WWL7 1395 aa11.99□□□□□ -0.49
EIF4A3-206ENST00000575978 CLSPNQ9HAW4 1339 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms