RNA–Protein interactions for RNA: ENST00000575154.1

RFWD3-209, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 3

Gene RFWD3, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-209ENST00000575154 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
RFWD3-209ENST00000575154 CCDC180Q9P1Z9 1646 aa18.77■□□□□ 0.6
RFWD3-209ENST00000575154 ZCCHC6Q5VYS8 1495 aaKnown RBP18.63■□□□□ 0.57
RFWD3-209ENST00000575154 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
RFWD3-209ENST00000575154 SHROOM4Q9ULL8 1493 aa18.32■□□□□ 0.52
RFWD3-209ENST00000575154 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
RFWD3-209ENST00000575154 CHIC1Q5VXU3 224 aa17.94■□□□□ 0.46
RFWD3-209ENST00000575154 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
RFWD3-209ENST00000575154 HRCP23327 699 aa17.78■□□□□ 0.44
RFWD3-209ENST00000575154 DCAF8L2P0C7V8 631 aa17.72■□□□□ 0.43
RFWD3-209ENST00000575154 ABCC9O60706 1549 aa17.59■□□□□ 0.41
RFWD3-209ENST00000575154 PCGF6Q9BYE7 350 aa17.42■□□□□ 0.38
RFWD3-209ENST00000575154 TRIM26Q12899 539 aaPredicted RBP17.39■□□□□ 0.37
RFWD3-209ENST00000575154 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
RFWD3-209ENST00000575154 RSF1Q96T23 1441 aaPredicted RBP17.36■□□□□ 0.37
RFWD3-209ENST00000575154 NACADO15069 1562 aa17.33■□□□□ 0.37
RFWD3-209ENST00000575154 RB1CC1Q8TDY2 1594 aa17.33■□□□□ 0.37
RFWD3-209ENST00000575154 SCRIBQ14160 1630 aa17.21■□□□□ 0.35
RFWD3-209ENST00000575154 TRIM41Q8WV44 630 aa17.17■□□□□ 0.34
RFWD3-209ENST00000575154 LOC105371045A0A1W2PR82 267 aa17.14■□□□□ 0.33
RFWD3-209ENST00000575154 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
RFWD3-209ENST00000575154 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
RFWD3-209ENST00000575154 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.29
RFWD3-209ENST00000575154 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
RFWD3-209ENST00000575154 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.28
RFWD3-209ENST00000575154 EEA1Q15075 1411 aa16.81■□□□□ 0.28
RFWD3-209ENST00000575154 TOP2AP11388 1531 aaKnown RBP16.78■□□□□ 0.28
RFWD3-209ENST00000575154 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
RFWD3-209ENST00000575154 WRNQ14191 1432 aaPredicted RBP eCLIP16.74■□□□□ 0.27
RFWD3-209ENST00000575154 WIZO95785 1651 aa16.73■□□□□ 0.27
RFWD3-209ENST00000575154 FAM9AQ8IZU1 332 aaPredicted RBP16.68■□□□□ 0.26
RFWD3-209ENST00000575154 SMARCA4P51532 1647 aa16.64■□□□□ 0.25
RFWD3-209ENST00000575154 TNIKQ9UKE5 1360 aa16.62■□□□□ 0.25
RFWD3-209ENST00000575154 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
RFWD3-209ENST00000575154 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
RFWD3-209ENST00000575154 CCER1Q8TC90 406 aaPredicted RBP16.5■□□□□ 0.23
RFWD3-209ENST00000575154 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
RFWD3-209ENST00000575154 CEP162Q5TB80 1403 aa16.49■□□□□ 0.23
RFWD3-209ENST00000575154 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
RFWD3-209ENST00000575154 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
RFWD3-209ENST00000575154 CENPBP07199 599 aaPredicted RBP16.42■□□□□ 0.22
RFWD3-209ENST00000575154 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
RFWD3-209ENST00000575154 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
RFWD3-209ENST00000575154 ABCC8Q09428 1581 aa16.35■□□□□ 0.21
RFWD3-209ENST00000575154 KIF21BO75037 1637 aa16.35■□□□□ 0.21
RFWD3-209ENST00000575154 SOGA1O94964 1423 aa16.31■□□□□ 0.2
RFWD3-209ENST00000575154 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
RFWD3-209ENST00000575154 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
RFWD3-209ENST00000575154 UBTFP17480 764 aaKnown RBP16.29■□□□□ 0.2
RFWD3-209ENST00000575154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
RFWD3-209ENST00000575154 DIEXFQ68CQ4 756 aaKnown RBP16.28■□□□□ 0.2
RFWD3-209ENST00000575154 MYT1Q01538 1121 aa16.27■□□□□ 0.2
RFWD3-209ENST00000575154 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
RFWD3-209ENST00000575154 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
RFWD3-209ENST00000575154 CLSPNQ9HAW4 1339 aa16.23■□□□□ 0.19
RFWD3-209ENST00000575154 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.19
RFWD3-209ENST00000575154 VPS8Q8N3P4 1428 aa16.21■□□□□ 0.19
RFWD3-209ENST00000575154 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
RFWD3-209ENST00000575154 APLP2Q06481 763 aa16.21■□□□□ 0.19
RFWD3-209ENST00000575154 CLIP1P30622 1438 aa16.19■□□□□ 0.18
RFWD3-209ENST00000575154 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
RFWD3-209ENST00000575154 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.17
RFWD3-209ENST00000575154 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
RFWD3-209ENST00000575154 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
RFWD3-209ENST00000575154 TOP2BQ02880 1626 aa16.09■□□□□ 0.17
RFWD3-209ENST00000575154 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
RFWD3-209ENST00000575154 NEUROD1Q13562 356 aa16.03■□□□□ 0.16
RFWD3-209ENST00000575154 HMGXB3Q12766 1538 aa16.03■□□□□ 0.16
RFWD3-209ENST00000575154 PRXQ9BXM0 1461 aa15.99■□□□□ 0.15
RFWD3-209ENST00000575154 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
RFWD3-209ENST00000575154 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
RFWD3-209ENST00000575154 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
RFWD3-209ENST00000575154 GTF3C3Q9Y5Q9 886 aa15.96■□□□□ 0.15
RFWD3-209ENST00000575154 KIF27Q86VH2 1401 aa15.95■□□□□ 0.14
RFWD3-209ENST00000575154 CUX2O14529 1486 aa15.89■□□□□ 0.13
RFWD3-209ENST00000575154 MAP3K1Q13233 1512 aa15.89■□□□□ 0.13
RFWD3-209ENST00000575154 RRBP1Q9P2E9 1410 aaKnown RBP15.88■□□□□ 0.13
RFWD3-209ENST00000575154 HNRNPUL2Q1KMD3 747 aaKnown RBP15.87■□□□□ 0.13
RFWD3-209ENST00000575154 TTBK1Q5TCY1 1321 aaPredicted RBP15.87■□□□□ 0.13
RFWD3-209ENST00000575154 CFTRP13569 1480 aa15.84■□□□□ 0.13
RFWD3-209ENST00000575154 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
RFWD3-209ENST00000575154 DHX57Q6P158 1386 aaKnown RBP15.79■□□□□ 0.12
RFWD3-209ENST00000575154 CCNB3Q8WWL7 1395 aa15.76■□□□□ 0.11
RFWD3-209ENST00000575154 CUX1P39880 1505 aa15.75■□□□□ 0.11
RFWD3-209ENST00000575154 MIER1Q8N108 512 aa15.75■□□□□ 0.11
RFWD3-209ENST00000575154 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
RFWD3-209ENST00000575154 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
RFWD3-209ENST00000575154 PRDM2Q13029 1718 aa15.7■□□□□ 0.1
RFWD3-209ENST00000575154 ARHGAP35Q9NRY4 1499 aa15.67■□□□□ 0.1
RFWD3-209ENST00000575154 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.66■□□□□ 0.1
RFWD3-209ENST00000575154 TIAM1Q13009 1591 aa15.62■□□□□ 0.09
RFWD3-209ENST00000575154 IGF1RP08069 1367 aa15.62■□□□□ 0.09
RFWD3-209ENST00000575154 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
RFWD3-209ENST00000575154 YTHDC1Q96MU7 727 aaKnown RBP15.61■□□□□ 0.09
RFWD3-209ENST00000575154 KANK4Q5T7N3 995 aaPredicted RBP15.6■□□□□ 0.09
RFWD3-209ENST00000575154 CARMIL1Q5VZK9 1371 aa15.59■□□□□ 0.09
RFWD3-209ENST00000575154 SETD5Q9C0A6 1442 aa15.59■□□□□ 0.09
RFWD3-209ENST00000575154 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.099e-10■■■■■ 32.9
RFWD3-209ENST00000575154 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.09
RFWD3-209ENST00000575154 LRRC9Q6ZRR7 1453 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms