RNA–Protein interactions for RNA: ENST00000573063.1

AC040160.1-201, humanhuman

BASIC

Gene AC040160.1, Length 2,677 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040160.1-201ENST00000573063 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
AC040160.1-201ENST00000573063 CCDC180Q9P1Z9 1646 aa19.27■□□□□ 0.68
AC040160.1-201ENST00000573063 SHROOM4Q9ULL8 1493 aa19.21■□□□□ 0.67
AC040160.1-201ENST00000573063 ZCCHC6Q5VYS8 1495 aaKnown RBP19.07■□□□□ 0.64
AC040160.1-201ENST00000573063 DCAF8L2P0C7V8 631 aa18.82■□□□□ 0.6
AC040160.1-201ENST00000573063 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
AC040160.1-201ENST00000573063 DCAF1Q9Y4B6 1507 aa18.5■□□□□ 0.55
AC040160.1-201ENST00000573063 CHIC1Q5VXU3 224 aa18.17■□□□□ 0.5
AC040160.1-201ENST00000573063 MYO15BQ96JP2 1530 aa18.07■□□□□ 0.48
AC040160.1-201ENST00000573063 SCRIBQ14160 1630 aa18.06■□□□□ 0.48
AC040160.1-201ENST00000573063 ABCC9O60706 1549 aa17.99■□□□□ 0.47
AC040160.1-201ENST00000573063 NACADO15069 1562 aa17.83■□□□□ 0.44
AC040160.1-201ENST00000573063 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
AC040160.1-201ENST00000573063 RB1CC1Q8TDY2 1594 aa17.64■□□□□ 0.41
AC040160.1-201ENST00000573063 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
AC040160.1-201ENST00000573063 CECR2Q9BXF3 1484 aa17.61■□□□□ 0.41
AC040160.1-201ENST00000573063 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
AC040160.1-201ENST00000573063 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
AC040160.1-201ENST00000573063 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
AC040160.1-201ENST00000573063 WIZO95785 1651 aa17.47■□□□□ 0.39
AC040160.1-201ENST00000573063 HRCP23327 699 aa17.43■□□□□ 0.38
AC040160.1-201ENST00000573063 FAM9AQ8IZU1 332 aaPredicted RBP17.37■□□□□ 0.37
AC040160.1-201ENST00000573063 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
AC040160.1-201ENST00000573063 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
AC040160.1-201ENST00000573063 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
AC040160.1-201ENST00000573063 SMARCA4P51532 1647 aa17.23■□□□□ 0.35
AC040160.1-201ENST00000573063 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
AC040160.1-201ENST00000573063 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
AC040160.1-201ENST00000573063 EIF4G1Q04637 1599 aaKnown RBP17.14■□□□□ 0.33
AC040160.1-201ENST00000573063 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
AC040160.1-201ENST00000573063 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
AC040160.1-201ENST00000573063 PPARGC1BQ86YN6 1023 aaKnown RBP17.1■□□□□ 0.33
AC040160.1-201ENST00000573063 SMARCA2P51531 1590 aa17.08■□□□□ 0.33
AC040160.1-201ENST00000573063 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
AC040160.1-201ENST00000573063 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
AC040160.1-201ENST00000573063 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
AC040160.1-201ENST00000573063 SOGA1O94964 1423 aa16.84■□□□□ 0.29
AC040160.1-201ENST00000573063 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
AC040160.1-201ENST00000573063 ATAD2BQ9ULI0 1458 aa16.79■□□□□ 0.28
AC040160.1-201ENST00000573063 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
AC040160.1-201ENST00000573063 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
AC040160.1-201ENST00000573063 RUSC2Q8N2Y8 1516 aa16.75■□□□□ 0.27
AC040160.1-201ENST00000573063 EEA1Q15075 1411 aa16.75■□□□□ 0.27
AC040160.1-201ENST00000573063 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
AC040160.1-201ENST00000573063 CEP162Q5TB80 1403 aa16.73■□□□□ 0.27
AC040160.1-201ENST00000573063 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
AC040160.1-201ENST00000573063 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
AC040160.1-201ENST00000573063 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
AC040160.1-201ENST00000573063 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
AC040160.1-201ENST00000573063 GOLGA3Q08378 1498 aa16.65■□□□□ 0.26
AC040160.1-201ENST00000573063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
AC040160.1-201ENST00000573063 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
AC040160.1-201ENST00000573063 CCER1Q8TC90 406 aaPredicted RBP16.54■□□□□ 0.24
AC040160.1-201ENST00000573063 KIF21BO75037 1637 aa16.53■□□□□ 0.24
AC040160.1-201ENST00000573063 TOP2BQ02880 1626 aa16.49■□□□□ 0.23
AC040160.1-201ENST00000573063 HMGXB3Q12766 1538 aa16.49■□□□□ 0.23
AC040160.1-201ENST00000573063 NCAPD3P42695 1498 aa16.47■□□□□ 0.23
AC040160.1-201ENST00000573063 CLIP1P30622 1438 aa16.45■□□□□ 0.22
AC040160.1-201ENST00000573063 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
AC040160.1-201ENST00000573063 BIVM-ERCC5R4GMW8 1640 aa16.43■□□□□ 0.22
AC040160.1-201ENST00000573063 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
AC040160.1-201ENST00000573063 VPS8Q8N3P4 1428 aa16.35■□□□□ 0.21
AC040160.1-201ENST00000573063 CUX1P39880 1505 aa16.34■□□□□ 0.21
AC040160.1-201ENST00000573063 APLP2Q06481 763 aa16.34■□□□□ 0.21
AC040160.1-201ENST00000573063 CFTRP13569 1480 aa16.32■□□□□ 0.2
AC040160.1-201ENST00000573063 ERICH3Q5RHP9 1530 aa16.28■□□□□ 0.2
AC040160.1-201ENST00000573063 HNRNPUL2Q1KMD3 747 aaKnown RBP16.27■□□□□ 0.2
AC040160.1-201ENST00000573063 PRXQ9BXM0 1461 aa16.27■□□□□ 0.2
AC040160.1-201ENST00000573063 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
AC040160.1-201ENST00000573063 PRDM2Q13029 1718 aa16.24■□□□□ 0.19
AC040160.1-201ENST00000573063 ARAP1Q96P48 1450 aa16.18■□□□□ 0.18
AC040160.1-201ENST00000573063 CADPSQ9ULU8 1353 aa16.17■□□□□ 0.18
AC040160.1-201ENST00000573063 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
AC040160.1-201ENST00000573063 CUX2O14529 1486 aa16.13■□□□□ 0.17
AC040160.1-201ENST00000573063 DIEXFQ68CQ4 756 aaKnown RBP16.13■□□□□ 0.17
AC040160.1-201ENST00000573063 FGD5Q6ZNL6 1462 aa16.08■□□□□ 0.17
AC040160.1-201ENST00000573063 KANK4Q5T7N3 995 aaPredicted RBP16.07■□□□□ 0.16
AC040160.1-201ENST00000573063 IGF1RP08069 1367 aa16.06■□□□□ 0.16
AC040160.1-201ENST00000573063 ARHGAP35Q9NRY4 1499 aa16.06■□□□□ 0.16
AC040160.1-201ENST00000573063 PELP1Q8IZL8 1130 aaKnown RBP16.03■□□□□ 0.16
AC040160.1-201ENST00000573063 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
AC040160.1-201ENST00000573063 ZNF316A6NFI3 1004 aaPredicted RBP16.03■□□□□ 0.16
AC040160.1-201ENST00000573063 CARMIL1Q5VZK9 1371 aa16.02■□□□□ 0.15
AC040160.1-201ENST00000573063 SCAF1Q9H7N4 1312 aaKnown RBP15.98■□□□□ 0.15
AC040160.1-201ENST00000573063 NESP48681 1621 aa15.95■□□□□ 0.14
AC040160.1-201ENST00000573063 DNMBPQ6XZF7 1577 aa15.94■□□□□ 0.14
AC040160.1-201ENST00000573063 RRBP1Q9P2E9 1410 aaKnown RBP15.93■□□□□ 0.14
AC040160.1-201ENST00000573063 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
AC040160.1-201ENST00000573063 TOPBP1Q92547 1522 aa15.91■□□□□ 0.14
AC040160.1-201ENST00000573063 ITGAEP38570 1179 aa15.91■□□□□ 0.14
AC040160.1-201ENST00000573063 CCNB3Q8WWL7 1395 aa15.9■□□□□ 0.14
AC040160.1-201ENST00000573063 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
AC040160.1-201ENST00000573063 ACIN1Q9UKV3 1341 aaKnown RBP15.89■□□□□ 0.13
AC040160.1-201ENST00000573063 DHX57Q6P158 1386 aaKnown RBP15.89■□□□□ 0.13
AC040160.1-201ENST00000573063 P3H3Q8IVL6 736 aa15.89■□□□□ 0.13
AC040160.1-201ENST00000573063 TIAM1Q13009 1591 aa15.88■□□□□ 0.13
AC040160.1-201ENST00000573063 NEUROD1Q13562 356 aa15.88■□□□□ 0.13
AC040160.1-201ENST00000573063 ABCA10Q8WWZ4 1543 aa15.88■□□□□ 0.13
AC040160.1-201ENST00000573063 CENPBP07199 599 aaPredicted RBP15.87■□□□□ 0.13
AC040160.1-201ENST00000573063 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms