RNA–Protein interactions for RNA: ENST00000570415.5

ITGAE-203, Transcript of integrin subunit alpha E, humanhuman

TSL 3

Gene ITGAE, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-203ENST00000570415 AEBP2Q6ZN18 517 aaPredicted RBP36.11■■■■□ 3.37
ITGAE-203ENST00000570415 CHIC1Q5VXU3 224 aa35.31■■■■□ 3.24
ITGAE-203ENST00000570415 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.56
ITGAE-203ENST00000570415 SENP3Q9H4L4 574 aaPredicted RBP30.61■■■□□ 2.49
ITGAE-203ENST00000570415 PLPPR3Q6T4P5 718 aa28.69■■■□□ 2.18
ITGAE-203ENST00000570415 FOXD1Q16676 465 aa28.41■■■□□ 2.14
ITGAE-203ENST00000570415 PPP6R1Q9UPN7 881 aa27.4■■□□□ 1.98
ITGAE-203ENST00000570415 ADRA2BP18089 450 aa27.37■■□□□ 1.97
ITGAE-203ENST00000570415 PIAS4Q8N2W9 510 aaPredicted RBP26.82■■□□□ 1.88
ITGAE-203ENST00000570415 MSH5O43196 834 aa26.16■■□□□ 1.78
ITGAE-203ENST00000570415 PPP4R3CPQ6ZMV5 832 aa25.3■■□□□ 1.64
ITGAE-203ENST00000570415 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
ITGAE-203ENST00000570415 MAPK8IP2Q13387 824 aaPredicted RBP24.82■■□□□ 1.56
ITGAE-203ENST00000570415 KCNA4P22459 653 aa24.79■■□□□ 1.56
ITGAE-203ENST00000570415 NCBP3Q53F19 620 aaKnown RBP24.63■■□□□ 1.53
ITGAE-203ENST00000570415 NISCHQ9Y2I1 1504 aa24.61■■□□□ 1.53
ITGAE-203ENST00000570415 CNKSR2Q8WXI2 1034 aa24.57■■□□□ 1.52
ITGAE-203ENST00000570415 DMRT2Q9Y5R5 561 aa24.45■■□□□ 1.5
ITGAE-203ENST00000570415 NPM3O75607 178 aaKnown RBP24.3■■□□□ 1.48
ITGAE-203ENST00000570415 RNF216Q9NWF9 866 aaPredicted RBP24.08■■□□□ 1.45
ITGAE-203ENST00000570415 HOXD11P31277 338 aaPredicted RBP23.97■■□□□ 1.43
ITGAE-203ENST00000570415 POTEDQ86YR6 584 aa23.74■■□□□ 1.39
ITGAE-203ENST00000570415 SLC4A1APQ9BWU0 796 aaKnown RBP23.6■■□□□ 1.37
ITGAE-203ENST00000570415 DNAJC5BQ9UF47 199 aa23.57■■□□□ 1.36
ITGAE-203ENST00000570415 DCAF8L1A6NGE4 600 aa23.38■■□□□ 1.33
ITGAE-203ENST00000570415 EHMT2Q96KQ7 1210 aa23.01■■□□□ 1.27
ITGAE-203ENST00000570415 SLC4A2P04920 1241 aa22.93■■□□□ 1.26
ITGAE-203ENST00000570415 ZBTB22O15209 634 aa22.83■■□□□ 1.25
ITGAE-203ENST00000570415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.83■■□□□ 1.253e-7■■□□□ 13.1
ITGAE-203ENST00000570415 FOXD4L1Q9NU39 408 aa22.79■■□□□ 1.24
ITGAE-203ENST00000570415 CSRNP3Q8WYN3 585 aa22.72■■□□□ 1.23
ITGAE-203ENST00000570415 ABCC9O60706 1549 aa22.7■■□□□ 1.22
ITGAE-203ENST00000570415 U3KPZ7 1027 aaPredicted RBP22.49■■□□□ 1.19
ITGAE-203ENST00000570415 MYCNP04198 464 aaPredicted RBP22.45■■□□□ 1.18
ITGAE-203ENST00000570415 RNF39Q9H2S5 420 aa22.43■■□□□ 1.18
ITGAE-203ENST00000570415 CCDC180Q9P1Z9 1646 aa22.26■■□□□ 1.15
ITGAE-203ENST00000570415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.19■■□□□ 1.14
ITGAE-203ENST00000570415 HNRNPUL2Q1KMD3 747 aaKnown RBP22.19■■□□□ 1.14
ITGAE-203ENST00000570415 C1QBPQ07021 282 aaKnown RBP22.15■■□□□ 1.14
ITGAE-203ENST00000570415 SAMD1Q6SPF0 538 aaPredicted RBP22.12■■□□□ 1.13
ITGAE-203ENST00000570415 ATXN8OSP0DMR3 200 aa21.97■■□□□ 1.11
ITGAE-203ENST00000570415 APLP2Q06481 763 aa21.94■■□□□ 1.1
ITGAE-203ENST00000570415 ATF5Q9Y2D1 282 aaPredicted RBP21.86■■□□□ 1.09
ITGAE-203ENST00000570415 SPINK5Q9NQ38 1064 aaPredicted RBP21.85■■□□□ 1.09
ITGAE-203ENST00000570415 CACNB1Q02641 598 aaPredicted RBP21.8■■□□□ 1.08
ITGAE-203ENST00000570415 CAPN15O75808 1086 aa21.74■■□□□ 1.07
ITGAE-203ENST00000570415 TRHP20396 242 aaPredicted RBP21.66■■□□□ 1.06
ITGAE-203ENST00000570415 ZNF219Q9P2Y4 722 aaPredicted RBP21.65■■□□□ 1.06
ITGAE-203ENST00000570415 DSG3P32926 999 aa21.37■■□□□ 1.01
ITGAE-203ENST00000570415 ABCB7O75027 752 aa21.36■■□□□ 1.01
ITGAE-203ENST00000570415 RB1CC1Q8TDY2 1594 aa21.33■■□□□ 1.01
ITGAE-203ENST00000570415 POLA2Q14181 598 aa21.31■■□□□ 1
ITGAE-203ENST00000570415 UNC13AQ9UPW8 1703 aa21.06■□□□□ 0.96
ITGAE-203ENST00000570415 PABPN1Q86U42 306 aaKnown RBP eCLIP21.05■□□□□ 0.96
ITGAE-203ENST00000570415 NACADO15069 1562 aa21.05■□□□□ 0.96
ITGAE-203ENST00000570415 ZBTB12Q9Y330 459 aaPredicted RBP20.96■□□□□ 0.95
ITGAE-203ENST00000570415 DCAF8L2P0C7V8 631 aa20.91■□□□□ 0.94
ITGAE-203ENST00000570415 MKRN4PQ13434 485 aaPredicted RBP20.91■□□□□ 0.94
ITGAE-203ENST00000570415 FBLN2P98095 1184 aa20.9■□□□□ 0.94
ITGAE-203ENST00000570415 BICRAQ9NZM4 1560 aa20.86■□□□□ 0.93
ITGAE-203ENST00000570415 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
ITGAE-203ENST00000570415 MYO15BQ96JP2 1530 aa20.57■□□□□ 0.88
ITGAE-203ENST00000570415 FKBP8Q14318 412 aa20.54■□□□□ 0.88
ITGAE-203ENST00000570415 CC2D2AQ9P2K1 1620 aa20.48■□□□□ 0.87
ITGAE-203ENST00000570415 SPDYE4A6NLX3 237 aa20.45■□□□□ 0.86
ITGAE-203ENST00000570415 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
ITGAE-203ENST00000570415 SPDYE2BA6NHP3 402 aa20.41■□□□□ 0.86
ITGAE-203ENST00000570415 SPDYE6P0CI01 402 aa20.41■□□□□ 0.86
ITGAE-203ENST00000570415 SPDYE2Q495Y8 402 aa20.41■□□□□ 0.86
ITGAE-203ENST00000570415 SCRIBQ14160 1630 aa20.4■□□□□ 0.86
ITGAE-203ENST00000570415 RBM42Q9BTD8 480 aaKnown RBP20.35■□□□□ 0.85
ITGAE-203ENST00000570415 ZCCHC6Q5VYS8 1495 aaKnown RBP20.35■□□□□ 0.85
ITGAE-203ENST00000570415 ZNF692Q9BU19 519 aaPredicted RBP20.33■□□□□ 0.85
ITGAE-203ENST00000570415 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
ITGAE-203ENST00000570415 SHROOM4Q9ULL8 1493 aa20.29■□□□□ 0.84
ITGAE-203ENST00000570415 SSUH2Q9Y2M2 353 aa20.27■□□□□ 0.84
ITGAE-203ENST00000570415 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
ITGAE-203ENST00000570415 PROM2Q8N271 834 aa20.14■□□□□ 0.81
ITGAE-203ENST00000570415 AKT1S1Q96B36 256 aa20.12■□□□□ 0.81
ITGAE-203ENST00000570415 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
ITGAE-203ENST00000570415 REM2Q8IYK8 340 aaPredicted RBP19.93■□□□□ 0.78
ITGAE-203ENST00000570415 SPDYE1Q8NFV5 336 aaPredicted RBP19.79■□□□□ 0.76
ITGAE-203ENST00000570415 FBXO3Q9UK99 471 aa19.76■□□□□ 0.75
ITGAE-203ENST00000570415 STAG3Q9UJ98 1225 aa19.73■□□□□ 0.75
ITGAE-203ENST00000570415 PITPNM1O00562 1244 aa19.72■□□□□ 0.75
ITGAE-203ENST00000570415 CLEC11AQ9Y240 323 aa19.71■□□□□ 0.75
ITGAE-203ENST00000570415 CUX2O14529 1486 aa19.57■□□□□ 0.72
ITGAE-203ENST00000570415 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
ITGAE-203ENST00000570415 PRR29P0C7W0 189 aa19.53■□□□□ 0.72
ITGAE-203ENST00000570415 VASPP50552 380 aaPredicted RBP19.52■□□□□ 0.72
ITGAE-203ENST00000570415 CHRDL2Q6WN34 429 aa19.49■□□□□ 0.71
ITGAE-203ENST00000570415 NESP48681 1621 aa19.45■□□□□ 0.7
ITGAE-203ENST00000570415 NCAPD3P42695 1498 aa19.42■□□□□ 0.7
ITGAE-203ENST00000570415 ATAD2BQ9ULI0 1458 aa19.39■□□□□ 0.69
ITGAE-203ENST00000570415 MIER1Q8N108 512 aa19.37■□□□□ 0.69
ITGAE-203ENST00000570415 PLCD3Q8N3E9 789 aa19.36■□□□□ 0.69
ITGAE-203ENST00000570415 SMARCA4P51532 1647 aa19.35■□□□□ 0.69
ITGAE-203ENST00000570415 FXR2P51116 673 aaKnown RBP eCLIP19.32■□□□□ 0.68
ITGAE-203ENST00000570415 THOC2Q8NI27 1593 aaKnown RBP19.32■□□□□ 0.68
ITGAE-203ENST00000570415 CREBZFQ9NS37 354 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms