RNA–Protein interactions for RNA: ENST00000569448.1

USP7-220, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 2

Gene USP7, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-220ENST00000569448 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
USP7-220ENST00000569448 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
USP7-220ENST00000569448 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
USP7-220ENST00000569448 SENP3Q9H4L4 574 aaPredicted RBP19.71■□□□□ 0.75
USP7-220ENST00000569448 PLPPR3Q6T4P5 718 aa18.84■□□□□ 0.61
USP7-220ENST00000569448 FOXD1Q16676 465 aa18.2■□□□□ 0.5
USP7-220ENST00000569448 ADRA2BP18089 450 aa17.74■□□□□ 0.43
USP7-220ENST00000569448 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
USP7-220ENST00000569448 PIAS4Q8N2W9 510 aaPredicted RBP17.24■□□□□ 0.35
USP7-220ENST00000569448 MSH5O43196 834 aa16.72■□□□□ 0.27
USP7-220ENST00000569448 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
USP7-220ENST00000569448 KCNA4P22459 653 aa16.54■□□□□ 0.24
USP7-220ENST00000569448 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
USP7-220ENST00000569448 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
USP7-220ENST00000569448 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
USP7-220ENST00000569448 NPM3O75607 178 aaKnown RBP16.01■□□□□ 0.15
USP7-220ENST00000569448 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
USP7-220ENST00000569448 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
USP7-220ENST00000569448 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
USP7-220ENST00000569448 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
USP7-220ENST00000569448 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
USP7-220ENST00000569448 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
USP7-220ENST00000569448 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
USP7-220ENST00000569448 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
USP7-220ENST00000569448 ZBTB22O15209 634 aa15.19■□□□□ 0.02
USP7-220ENST00000569448 FOXD4L1Q9NU39 408 aa15.17■□□□□ 0.02
USP7-220ENST00000569448 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
USP7-220ENST00000569448 SLC4A2P04920 1241 aa15.03■□□□□ -0
USP7-220ENST00000569448 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
USP7-220ENST00000569448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.042e-10■■■□□ 18.1
USP7-220ENST00000569448 ATXN8OSP0DMR3 200 aa14.69□□□□□ -0.06
USP7-220ENST00000569448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.62□□□□□ -0.07
USP7-220ENST00000569448 HNRNPUL2Q1KMD3 747 aaKnown RBP14.62□□□□□ -0.07
USP7-220ENST00000569448 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
USP7-220ENST00000569448 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
USP7-220ENST00000569448 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
USP7-220ENST00000569448 APLP2Q06481 763 aa14.4□□□□□ -0.1
USP7-220ENST00000569448 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
USP7-220ENST00000569448 ATF5Q9Y2D1 282 aaPredicted RBP14.33□□□□□ -0.12
USP7-220ENST00000569448 C1QBPQ07021 282 aaKnown RBP14.22□□□□□ -0.13
USP7-220ENST00000569448 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
USP7-220ENST00000569448 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
USP7-220ENST00000569448 CAPN15O75808 1086 aa14.03□□□□□ -0.16
USP7-220ENST00000569448 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
USP7-220ENST00000569448 POLA2Q14181 598 aa13.9□□□□□ -0.18
USP7-220ENST00000569448 FKBP8Q14318 412 aa13.89□□□□□ -0.19
USP7-220ENST00000569448 FBLN2P98095 1184 aa13.81□□□□□ -0.2
USP7-220ENST00000569448 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
USP7-220ENST00000569448 ABCB7O75027 752 aa13.75□□□□□ -0.21
USP7-220ENST00000569448 CACNB1Q02641 598 aaPredicted RBP13.74□□□□□ -0.21
USP7-220ENST00000569448 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
USP7-220ENST00000569448 DSG3P32926 999 aa13.72□□□□□ -0.21
USP7-220ENST00000569448 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
USP7-220ENST00000569448 PROM2Q8N271 834 aa13.45□□□□□ -0.26
USP7-220ENST00000569448 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
USP7-220ENST00000569448 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
USP7-220ENST00000569448 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
USP7-220ENST00000569448 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
USP7-220ENST00000569448 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
USP7-220ENST00000569448 ZNF692Q9BU19 519 aaPredicted RBP13.36□□□□□ -0.27
USP7-220ENST00000569448 SSUH2Q9Y2M2 353 aa13.28□□□□□ -0.28
USP7-220ENST00000569448 AMER1Q5JTC6 1135 aaPredicted RBP13.26□□□□□ -0.29
USP7-220ENST00000569448 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP7-220ENST00000569448 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
USP7-220ENST00000569448 RTN4Q9NQC3 1192 aaKnown RBP13.15□□□□□ -0.3
USP7-220ENST00000569448 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
USP7-220ENST00000569448 STAG3Q9UJ98 1225 aa13.12□□□□□ -0.31
USP7-220ENST00000569448 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
USP7-220ENST00000569448 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
USP7-220ENST00000569448 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
USP7-220ENST00000569448 SPDYE1Q8NFV5 336 aaPredicted RBP12.92□□□□□ -0.34
USP7-220ENST00000569448 MIER1Q8N108 512 aa12.91□□□□□ -0.34
USP7-220ENST00000569448 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
USP7-220ENST00000569448 REM2Q8IYK8 340 aaPredicted RBP12.87□□□□□ -0.35
USP7-220ENST00000569448 PLEKHG5O94827 1062 aa12.86□□□□□ -0.35
USP7-220ENST00000569448 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
USP7-220ENST00000569448 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
USP7-220ENST00000569448 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
USP7-220ENST00000569448 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
USP7-220ENST00000569448 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
USP7-220ENST00000569448 PKD2Q13563 968 aa12.67□□□□□ -0.38
USP7-220ENST00000569448 CREBZFQ9NS37 354 aa12.63□□□□□ -0.39
USP7-220ENST00000569448 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
USP7-220ENST00000569448 MNX1P50219 401 aaPredicted RBP12.54□□□□□ -0.4
USP7-220ENST00000569448 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
USP7-220ENST00000569448 NUBP1P53384 320 aa12.52□□□□□ -0.41
USP7-220ENST00000569448 GSE1Q14687 1217 aa12.52□□□□□ -0.41
USP7-220ENST00000569448 TRIM41Q8WV44 630 aa12.52□□□□□ -0.41
USP7-220ENST00000569448 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP7-220ENST00000569448 DCAF8L2P0C7V8 631 aa12.47□□□□□ -0.41
USP7-220ENST00000569448 DCAF8Q5TAQ9 597 aa12.45□□□□□ -0.42
USP7-220ENST00000569448 FAM212AQ96EL1 285 aa12.44□□□□□ -0.42
USP7-220ENST00000569448 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
USP7-220ENST00000569448 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.423e-7■■■■□ 25.7
USP7-220ENST00000569448 CHRDL2Q6WN34 429 aa12.42□□□□□ -0.42
USP7-220ENST00000569448 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
USP7-220ENST00000569448 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
USP7-220ENST00000569448 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
USP7-220ENST00000569448 RGL2O15211 777 aa12.38□□□□□ -0.43
USP7-220ENST00000569448 RASEFQ8IZ41 740 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms