RNA–Protein interactions for RNA: ENST00000569341.1

CFDP1-208, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-208ENST00000569341 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
CFDP1-208ENST00000569341 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
CFDP1-208ENST00000569341 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
CFDP1-208ENST00000569341 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
CFDP1-208ENST00000569341 FOXD1Q16676 465 aa19.88■□□□□ 0.77
CFDP1-208ENST00000569341 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
CFDP1-208ENST00000569341 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.56
CFDP1-208ENST00000569341 MSH5O43196 834 aa18.55■□□□□ 0.56
CFDP1-208ENST00000569341 PIAS4Q8N2W9 510 aaPredicted RBP18.5■□□□□ 0.55
CFDP1-208ENST00000569341 ADRA2BP18089 450 aa18.47■□□□□ 0.55
CFDP1-208ENST00000569341 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
CFDP1-208ENST00000569341 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.32
CFDP1-208ENST00000569341 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
CFDP1-208ENST00000569341 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
CFDP1-208ENST00000569341 PPP4R3CPQ6ZMV5 832 aa16.5■□□□□ 0.23
CFDP1-208ENST00000569341 HOXD11P31277 338 aaPredicted RBP16.24■□□□□ 0.19
CFDP1-208ENST00000569341 CNKSR2Q8WXI2 1034 aa16.18■□□□□ 0.18
CFDP1-208ENST00000569341 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
CFDP1-208ENST00000569341 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
CFDP1-208ENST00000569341 CACNB1Q02641 598 aaPredicted RBP15.97■□□□□ 0.15
CFDP1-208ENST00000569341 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
CFDP1-208ENST00000569341 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
CFDP1-208ENST00000569341 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
CFDP1-208ENST00000569341 NPM3O75607 178 aaKnown RBP15.62■□□□□ 0.09
CFDP1-208ENST00000569341 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
CFDP1-208ENST00000569341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.063e-12■■□□□ 12.5
CFDP1-208ENST00000569341 KCNA4P22459 653 aa15.26■□□□□ 0.03
CFDP1-208ENST00000569341 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
CFDP1-208ENST00000569341 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
CFDP1-208ENST00000569341 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
CFDP1-208ENST00000569341 DSG3P32926 999 aa14.86□□□□□ -0.03
CFDP1-208ENST00000569341 CAPN15O75808 1086 aa14.85□□□□□ -0.03
CFDP1-208ENST00000569341 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
CFDP1-208ENST00000569341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
CFDP1-208ENST00000569341 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
CFDP1-208ENST00000569341 APLP2Q06481 763 aa14.56□□□□□ -0.08
CFDP1-208ENST00000569341 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
CFDP1-208ENST00000569341 ABCB7O75027 752 aa14.54□□□□□ -0.08
CFDP1-208ENST00000569341 SAMD1Q6SPF0 538 aaPredicted RBP14.5□□□□□ -0.09
CFDP1-208ENST00000569341 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
CFDP1-208ENST00000569341 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
CFDP1-208ENST00000569341 POTEHQ6S545 545 aa14.31□□□□□ -0.12
CFDP1-208ENST00000569341 POLA2Q14181 598 aa14.22□□□□□ -0.13
CFDP1-208ENST00000569341 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
CFDP1-208ENST00000569341 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
CFDP1-208ENST00000569341 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
CFDP1-208ENST00000569341 ZBTB22O15209 634 aa14.07□□□□□ -0.16
CFDP1-208ENST00000569341 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
CFDP1-208ENST00000569341 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
CFDP1-208ENST00000569341 AKT1S1Q96B36 256 aa13.79□□□□□ -0.2
CFDP1-208ENST00000569341 ATXN8OSP0DMR3 200 aa13.78□□□□□ -0.2
CFDP1-208ENST00000569341 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
CFDP1-208ENST00000569341 REM2Q8IYK8 340 aaPredicted RBP13.68□□□□□ -0.22
CFDP1-208ENST00000569341 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
CFDP1-208ENST00000569341 PIP4P2Q8N4L2 257 aa13.54□□□□□ -0.24
CFDP1-208ENST00000569341 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
CFDP1-208ENST00000569341 FBLN2P98095 1184 aa13.48□□□□□ -0.25
CFDP1-208ENST00000569341 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
CFDP1-208ENST00000569341 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
CFDP1-208ENST00000569341 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
CFDP1-208ENST00000569341 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.25
CFDP1-208ENST00000569341 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
CFDP1-208ENST00000569341 CSRNP3Q8WYN3 585 aa13.33□□□□□ -0.28
CFDP1-208ENST00000569341 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
CFDP1-208ENST00000569341 ZNF692Q9BU19 519 aaPredicted RBP13.29□□□□□ -0.28
CFDP1-208ENST00000569341 HAX1O00165 279 aa13.27□□□□□ -0.29
CFDP1-208ENST00000569341 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
CFDP1-208ENST00000569341 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
CFDP1-208ENST00000569341 EVX2Q03828 476 aa13.21□□□□□ -0.29
CFDP1-208ENST00000569341 PRKAR2AP13861 404 aaKnown RBP13.17□□□□□ -0.3
CFDP1-208ENST00000569341 PABPN1Q86U42 306 aaKnown RBP eCLIP13.11□□□□□ -0.31
CFDP1-208ENST00000569341 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
CFDP1-208ENST00000569341 EHMT2Q96KQ7 1210 aa13.04□□□□□ -0.32
CFDP1-208ENST00000569341 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
CFDP1-208ENST00000569341 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
CFDP1-208ENST00000569341 GABBR2O75899 941 aa12.85□□□□□ -0.35
CFDP1-208ENST00000569341 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
CFDP1-208ENST00000569341 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
CFDP1-208ENST00000569341 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
CFDP1-208ENST00000569341 CREBZFQ9NS37 354 aa12.72□□□□□ -0.37
CFDP1-208ENST00000569341 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
CFDP1-208ENST00000569341 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
CFDP1-208ENST00000569341 ZNF579Q8NAF0 562 aaKnown RBP12.55□□□□□ -0.4
CFDP1-208ENST00000569341 CLCN6P51797 869 aa12.54□□□□□ -0.4
CFDP1-208ENST00000569341 LHX8Q68G74 356 aa12.54□□□□□ -0.4
CFDP1-208ENST00000569341 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
CFDP1-208ENST00000569341 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
CFDP1-208ENST00000569341 PROM2Q8N271 834 aa12.49□□□□□ -0.41
CFDP1-208ENST00000569341 GALR2O43603 387 aaPredicted RBP12.43□□□□□ -0.42
CFDP1-208ENST00000569341 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
CFDP1-208ENST00000569341 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
CFDP1-208ENST00000569341 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
CFDP1-208ENST00000569341 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
CFDP1-208ENST00000569341 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
CFDP1-208ENST00000569341 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
CFDP1-208ENST00000569341 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
CFDP1-208ENST00000569341 TSPYL2Q9H2G4 693 aaPredicted RBP12.21□□□□□ -0.45
CFDP1-208ENST00000569341 CCDC61Q9Y6R9 512 aa12.19□□□□□ -0.46
CFDP1-208ENST00000569341 MIER1Q8N108 512 aa12.16□□□□□ -0.46
CFDP1-208ENST00000569341 ASTLQ6HA08 431 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms