RNA–Protein interactions for RNA: ENST00000569304.1

RAB11A-208, Transcript of RAB11A, member RAS oncogene family, human

TSL 3

Gene RAB11A, Length 347 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB11A-208	ENST00000569304	AEBP2	Q6ZN18	517 aa	Predicted RBP	21.04	■□□□□ 0.96
RAB11A-208	ENST00000569304	CHIC1	Q5VXU3	224 aa		19.77	■□□□□ 0.76
RAB11A-208	ENST00000569304	SENP3	Q9H4L4	574 aa	Predicted RBP	18.12	■□□□□ 0.49
RAB11A-208	ENST00000569304	PHF23	Q9BUL5	403 aa	Predicted RBP	17.79	■□□□□ 0.44
RAB11A-208	ENST00000569304	FOXD1	Q16676	465 aa		16.87	■□□□□ 0.29
RAB11A-208	ENST00000569304	POTED	Q86YR6	584 aa		16.36	■□□□□ 0.21
RAB11A-208	ENST00000569304	MSH5	O43196	834 aa		16.04	■□□□□ 0.16
RAB11A-208	ENST00000569304	PIAS4	Q8N2W9	510 aa	Predicted RBP	15.72	■□□□□ 0.11
RAB11A-208	ENST00000569304	PLPPR3	Q6T4P5	718 aa		15.5	■□□□□ 0.07
RAB11A-208	ENST00000569304	PPP6R1	Q9UPN7	881 aa		15.41	■□□□□ 0.06
RAB11A-208	ENST00000569304	ADRA2B	P18089	450 aa		15.36	■□□□□ 0.05
RAB11A-208	ENST00000569304	DMRT2	Q9Y5R5	561 aa		14.26	□□□□□ -0.13
RAB11A-208	ENST00000569304	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.23	□□□□□ -0.13
RAB11A-208	ENST00000569304	SCAF1	Q9H7N4	1312 aa	Known RBP	14.17	□□□□□ -0.14
RAB11A-208	ENST00000569304	CACNB1	Q02641	598 aa	Predicted RBP	14.05	□□□□□ -0.16
RAB11A-208	ENST00000569304	DCAF8L1	A6NGE4	600 aa		13.78	□□□□□ -0.2
RAB11A-208	ENST00000569304	KCNA4	P22459	653 aa		13.72	□□□□□ -0.21
RAB11A-208	ENST00000569304	RNF39	Q9H2S5	420 aa		13.6	□□□□□ -0.23
RAB11A-208	ENST00000569304	HOXD11	P31277	338 aa	Predicted RBP	13.55	□□□□□ -0.24
RAB11A-208	ENST00000569304	PPP4R3CP	Q6ZMV5	832 aa		13.52	□□□□□ -0.25
RAB11A-208	ENST00000569304	C1QBP	Q07021	282 aa	Known RBP	13.42	□□□□□ -0.26
RAB11A-208	ENST00000569304	CNKSR2	Q8WXI2	1034 aa		13.37	□□□□□ -0.27
RAB11A-208	ENST00000569304	RNF216	Q9NWF9	866 aa	Predicted RBP	13.35	□□□□□ -0.27
RAB11A-208	ENST00000569304	NCBP3	Q53F19	620 aa	Known RBP	13.27	□□□□□ -0.29
RAB11A-208	ENST00000569304	EHMT2	Q96KQ7	1210 aa		13.23	□□□□□ -0.29
RAB11A-208	ENST00000569304	DNAJC5B	Q9UF47	199 aa		13.2	□□□□□ -0.3
RAB11A-208	ENST00000569304	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.12	□□□□□ -0.31
RAB11A-208	ENST00000569304	NPM3	O75607	178 aa	Known RBP	13.11	□□□□□ -0.31
RAB11A-208	ENST00000569304	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
RAB11A-208	ENST00000569304	CSRNP3	Q8WYN3	585 aa		12.94	□□□□□ -0.34
RAB11A-208	ENST00000569304	POTEH	Q6S545	545 aa		12.76	□□□□□ -0.37
RAB11A-208	ENST00000569304	ZBTB22	O15209	634 aa		12.66	□□□□□ -0.38
RAB11A-208	ENST00000569304	CAPN15	O75808	1086 aa		12.6	□□□□□ -0.39
RAB11A-208	ENST00000569304	DSG3	P32926	999 aa		12.58	□□□□□ -0.4
RAB11A-208	ENST00000569304		U3KPZ7	1027 aa	Predicted RBP	12.57	□□□□□ -0.4
RAB11A-208	ENST00000569304	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.53	□□□□□ -0.4
RAB11A-208	ENST00000569304	FOXD4L1	Q9NU39	408 aa		12.48	□□□□□ -0.41
RAB11A-208	ENST00000569304	APLP2	Q06481	763 aa		12.31	□□□□□ -0.44
RAB11A-208	ENST00000569304	SLC4A2	P04920	1241 aa		12.29	□□□□□ -0.44
RAB11A-208	ENST00000569304	TRH	P20396	242 aa	Predicted RBP	12.29	□□□□□ -0.44
RAB11A-208	ENST00000569304	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.26	□□□□□ -0.45
RAB11A-208	ENST00000569304	ABCB7	O75027	752 aa		12.24	□□□□□ -0.45
RAB11A-208	ENST00000569304	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.18	□□□□□ -0.46
RAB11A-208	ENST00000569304	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.18	□□□□□ -0.46
RAB11A-208	ENST00000569304	RBM42	Q9BTD8	480 aa	Known RBP	12.09	□□□□□ -0.47
RAB11A-208	ENST00000569304	MYCN	P04198	464 aa	Predicted RBP	12.08	□□□□□ -0.48
RAB11A-208	ENST00000569304	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.06	□□□□□ -0.48
RAB11A-208	ENST00000569304	ATXN8OS	P0DMR3	200 aa		12.04	□□□□□ -0.48
RAB11A-208	ENST00000569304	CHRDL2	Q6WN34	429 aa		11.97	□□□□□ -0.49
RAB11A-208	ENST00000569304	POLA2	Q14181	598 aa		11.84	□□□□□ -0.51
RAB11A-208	ENST00000569304	SP7	Q8TDD2	431 aa	Predicted RBP	11.76	□□□□□ -0.53
RAB11A-208	ENST00000569304	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.75	□□□□□ -0.53
RAB11A-208	ENST00000569304	AKT1S1	Q96B36	256 aa		11.69	□□□□□ -0.54
RAB11A-208	ENST00000569304	FKBP8	Q14318	412 aa		11.62	□□□□□ -0.55
RAB11A-208	ENST00000569304	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.62	□□□□□ -0.55
RAB11A-208	ENST00000569304	REM2	Q8IYK8	340 aa	Predicted RBP	11.56	□□□□□ -0.56
RAB11A-208	ENST00000569304	PIP4P2	Q8N4L2	257 aa		11.56	□□□□□ -0.56
RAB11A-208	ENST00000569304	HAX1	O00165	279 aa		11.54	□□□□□ -0.56
RAB11A-208	ENST00000569304	OSCAR	Q8IYS5	282 aa		11.46	□□□□□ -0.57
RAB11A-208	ENST00000569304	PITPNM1	O00562	1244 aa		11.42	□□□□□ -0.58
RAB11A-208	ENST00000569304	FXR2	P51116	673 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
RAB11A-208	ENST00000569304	RTN4	Q9NQC3	1192 aa	Known RBP	11.4	□□□□□ -0.58
RAB11A-208	ENST00000569304	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.39	□□□□□ -0.59
RAB11A-208	ENST00000569304	MKRN4P	Q13434	485 aa	Predicted RBP	11.28	□□□□□ -0.6
RAB11A-208	ENST00000569304	EVX2	Q03828	476 aa		11.25	□□□□□ -0.61
RAB11A-208	ENST00000569304	SPDYE4	A6NLX3	237 aa		11.2	□□□□□ -0.62
RAB11A-208	ENST00000569304	SPDYE2B	A6NHP3	402 aa		11.19	□□□□□ -0.62
RAB11A-208	ENST00000569304	SPDYE6	P0CI01	402 aa		11.19	□□□□□ -0.62
RAB11A-208	ENST00000569304	SPDYE2	Q495Y8	402 aa		11.19	□□□□□ -0.62
RAB11A-208	ENST00000569304	FBLN2	P98095	1184 aa		11.18	□□□□□ -0.62
RAB11A-208	ENST00000569304	PRKAR2A	P13861	404 aa	Known RBP	11.15	□□□□□ -0.62
RAB11A-208	ENST00000569304	PROM2	Q8N271	834 aa		11.15	□□□□□ -0.62
RAB11A-208	ENST00000569304	CLEC11A	Q9Y240	323 aa		11.13	□□□□□ -0.63
RAB11A-208	ENST00000569304	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB11A-208	ENST00000569304	FBXO3	Q9UK99	471 aa		11.1	□□□□□ -0.63
RAB11A-208	ENST00000569304	C19orf67	A6NJJ6	358 aa		11.06	□□□□□ -0.64
RAB11A-208	ENST00000569304	LHX8	Q68G74	356 aa		11.04	□□□□□ -0.64
RAB11A-208	ENST00000569304	GABBR2	O75899	941 aa		11.03	□□□□□ -0.64
RAB11A-208	ENST00000569304	SLC24A1	O60721	1099 aa		11	□□□□□ -0.65
RAB11A-208	ENST00000569304	ZNF692	Q9BU19	519 aa	Predicted RBP	11	□□□□□ -0.65
RAB11A-208	ENST00000569304	VASP	P50552	380 aa	Predicted RBP	10.95	□□□□□ -0.66
RAB11A-208	ENST00000569304	SSUH2	Q9Y2M2	353 aa		10.94	□□□□□ -0.66
RAB11A-208	ENST00000569304	CHADL	Q6NUI6	762 aa		10.9	□□□□□ -0.66
RAB11A-208	ENST00000569304	PRR29	P0C7W0	189 aa		10.89	□□□□□ -0.67
RAB11A-208	ENST00000569304	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.85	□□□□□ -0.67
RAB11A-208	ENST00000569304	PABPN1	Q86U42	306 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
RAB11A-208	ENST00000569304	CD44	P16070	742 aa	Known RBP	10.78	□□□□□ -0.68
RAB11A-208	ENST00000569304	CLCN6	P51797	869 aa		10.78	□□□□□ -0.68
RAB11A-208	ENST00000569304	PLSCR2	Q9NRY7	297 aa		10.74	□□□□□ -0.69
RAB11A-208	ENST00000569304	POTEI	P0CG38	1075 aa		10.73	□□□□□ -0.69
RAB11A-208	ENST00000569304	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.72	□□□□□ -0.69
RAB11A-208	ENST00000569304	DCBLD2	Q96PD2	775 aa		10.71	□□□□□ -0.69
RAB11A-208	ENST00000569304	STAG3	Q9UJ98	1225 aa		10.71	□□□□□ -0.69
RAB11A-208	ENST00000569304	PKD2	Q13563	968 aa		10.66	□□□□□ -0.7
RAB11A-208	ENST00000569304	SPOCK2	Q92563	424 aa		10.62	□□□□□ -0.71
RAB11A-208	ENST00000569304	KLHL34	Q8N239	644 aa		10.61	□□□□□ -0.71
RAB11A-208	ENST00000569304	PLCD3	Q8N3E9	789 aa		10.58	□□□□□ -0.72
RAB11A-208	ENST00000569304	ZNF579	Q8NAF0	562 aa	Known RBP	10.57	□□□□□ -0.72
RAB11A-208	ENST00000569304	ZRANB1	Q9UGI0	708 aa		10.57	□□□□□ -0.72
RAB11A-208	ENST00000569304	MIER1	Q8N108	512 aa		10.56	□□□□□ -0.72

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