RNA–Protein interactions for RNA: ENST00000568530.5

PDPR-210, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPR, Length 7,223 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-210ENST00000568530 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
PDPR-210ENST00000568530 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
PDPR-210ENST00000568530 SUPT5HO00267 1087 aaKnown RBP13.75□□□□□ -0.21
PDPR-210ENST00000568530 SHROOM4Q9ULL8 1493 aa13.65□□□□□ -0.22
PDPR-210ENST00000568530 TTBK1Q5TCY1 1321 aaPredicted RBP13.51□□□□□ -0.25
PDPR-210ENST00000568530 RANGAP1P46060 587 aaPredicted RBP13.41□□□□□ -0.26
PDPR-210ENST00000568530 FAM9AQ8IZU1 332 aaPredicted RBP13.38□□□□□ -0.27
PDPR-210ENST00000568530 PELP1Q8IZL8 1130 aaKnown RBP13.37□□□□□ -0.27
PDPR-210ENST00000568530 ATP1B4Q9UN42 357 aaPredicted RBP13.35□□□□□ -0.27
PDPR-210ENST00000568530 CHIC1Q5VXU3 224 aa13.3□□□□□ -0.28
PDPR-210ENST00000568530 APLP2Q06481 763 aa13.28□□□□□ -0.28
PDPR-210ENST00000568530 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
PDPR-210ENST00000568530 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
PDPR-210ENST00000568530 NISCHQ9Y2I1 1504 aa13.19□□□□□ -0.3
PDPR-210ENST00000568530 MYT1Q01538 1121 aa13.11□□□□□ -0.31
PDPR-210ENST00000568530 PCGF6Q9BYE7 350 aa13.01□□□□□ -0.33
PDPR-210ENST00000568530 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
PDPR-210ENST00000568530 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
PDPR-210ENST00000568530 POLR3GLQ9BT43 218 aa12.89□□□□□ -0.35
PDPR-210ENST00000568530 CCER1Q8TC90 406 aaPredicted RBP12.81□□□□□ -0.36
PDPR-210ENST00000568530 PPARGC1BQ86YN6 1023 aaKnown RBP12.77□□□□□ -0.36
PDPR-210ENST00000568530 YTHDC1Q96MU7 727 aaKnown RBP12.76□□□□□ -0.37
PDPR-210ENST00000568530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
PDPR-210ENST00000568530 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
PDPR-210ENST00000568530 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
PDPR-210ENST00000568530 BCL11AQ9H165 835 aa12.67□□□□□ -0.38
PDPR-210ENST00000568530 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
PDPR-210ENST00000568530 PLPPR3Q6T4P5 718 aa12.6□□□□□ -0.39
PDPR-210ENST00000568530 NEFLP07196 543 aa12.56□□□□□ -0.4
PDPR-210ENST00000568530 CENPBP07199 599 aaPredicted RBP12.52□□□□□ -0.41
PDPR-210ENST00000568530 TRIM41Q8WV44 630 aa12.52□□□□□ -0.41
PDPR-210ENST00000568530 ITGAEP38570 1179 aa12.5□□□□□ -0.41
PDPR-210ENST00000568530 UBTFP17480 764 aaKnown RBP12.48□□□□□ -0.41
PDPR-210ENST00000568530 BCANQ96GW7 911 aa12.47□□□□□ -0.41
PDPR-210ENST00000568530 CLSPNQ9HAW4 1339 aa12.41□□□□□ -0.42
PDPR-210ENST00000568530 ZEB1P37275 1124 aaPredicted RBP12.34□□□□□ -0.43
PDPR-210ENST00000568530 A0A0G2JS52 829 aa12.31□□□□□ -0.44
PDPR-210ENST00000568530 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
PDPR-210ENST00000568530 ZNF316A6NFI3 1004 aaPredicted RBP12.29□□□□□ -0.44
PDPR-210ENST00000568530 PLEKHG5O94827 1062 aa12.21□□□□□ -0.46
PDPR-210ENST00000568530 SCAF1Q9H7N4 1312 aaKnown RBP12.2□□□□□ -0.46
PDPR-210ENST00000568530 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
PDPR-210ENST00000568530 TRIM26Q12899 539 aaPredicted RBP12.16□□□□□ -0.46
PDPR-210ENST00000568530 HRCP23327 699 aa12.15□□□□□ -0.46
PDPR-210ENST00000568530 TULP1O00294 542 aaPredicted RBP12.12□□□□□ -0.47
PDPR-210ENST00000568530 FBLN2P98095 1184 aa12.11□□□□□ -0.47
PDPR-210ENST00000568530 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
PDPR-210ENST00000568530 SENP3Q9H4L4 574 aaPredicted RBP12.08□□□□□ -0.48
PDPR-210ENST00000568530 ZNF326Q5BKZ1 582 aaKnown RBP12.07□□□□□ -0.48
PDPR-210ENST00000568530 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
PDPR-210ENST00000568530 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
PDPR-210ENST00000568530 CANXP27824 592 aaKnown RBP11.98□□□□□ -0.49
PDPR-210ENST00000568530 ESF1Q9H501 851 aaKnown RBP11.97□□□□□ -0.49
PDPR-210ENST00000568530 RTL5Q5HYW3 569 aaPredicted RBP11.95□□□□□ -0.5
PDPR-210ENST00000568530 ARID3CA6NKF2 412 aa11.95□□□□□ -0.5
PDPR-210ENST00000568530 DIEXFQ68CQ4 756 aaKnown RBP11.93□□□□□ -0.5
PDPR-210ENST00000568530 NEUROD1Q13562 356 aa11.91□□□□□ -0.5
PDPR-210ENST00000568530 FAM50AQ14320 339 aaKnown RBP11.91□□□□□ -0.5
PDPR-210ENST00000568530 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
PDPR-210ENST00000568530 NEFMP07197 916 aa11.89□□□□□ -0.51
PDPR-210ENST00000568530 CHGAP10645 457 aaKnown RBP11.85□□□□□ -0.51
PDPR-210ENST00000568530 CDK11BP21127 795 aaKnown RBP11.83□□□□□ -0.52
PDPR-210ENST00000568530 ARXQ96QS3 562 aa11.83□□□□□ -0.52
PDPR-210ENST00000568530 CDK11AQ9UQ88 783 aaPredicted RBP11.83□□□□□ -0.52
PDPR-210ENST00000568530 GTF3C3Q9Y5Q9 886 aa11.83□□□□□ -0.52
PDPR-210ENST00000568530 C14orf37Q86TY3 774 aa11.78□□□□□ -0.52
PDPR-210ENST00000568530 HAP1P54257 671 aaPredicted RBP11.75□□□□□ -0.53
PDPR-210ENST00000568530 TAOK2Q9UL54 1235 aa11.75□□□□□ -0.53
PDPR-210ENST00000568530 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
PDPR-210ENST00000568530 NPHP1O15259 732 aa11.71□□□□□ -0.53
PDPR-210ENST00000568530 NPM2Q86SE8 214 aaKnown RBP11.71□□□□□ -0.54
PDPR-210ENST00000568530 ZNF777Q9ULD5 760 aaPredicted RBP11.71□□□□□ -0.54
PDPR-210ENST00000568530 HSP90AA1P07900 732 aaKnown RBP11.67□□□□□ -0.54
PDPR-210ENST00000568530 TPRNQ4KMQ1 711 aa11.64□□□□□ -0.55
PDPR-210ENST00000568530 CLSTN1O94985 981 aa11.63□□□□□ -0.55
PDPR-210ENST00000568530 P3H3Q8IVL6 736 aa11.63□□□□□ -0.55
PDPR-210ENST00000568530 ABCC9O60706 1549 aa11.6□□□□□ -0.55
PDPR-210ENST00000568530 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
PDPR-210ENST00000568530 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
PDPR-210ENST00000568530 PRM3Q9NNZ6 103 aa11.59□□□□□ -0.55
PDPR-210ENST00000568530 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
PDPR-210ENST00000568530 ANP32CO43423 234 aa11.58□□□□□ -0.56
PDPR-210ENST00000568530 LMOD2Q6P5Q4 547 aa11.54□□□□□ -0.56
PDPR-210ENST00000568530 EIF5BO60841 1220 aaKnown RBP11.53□□□□□ -0.56
PDPR-210ENST00000568530 NPM1P06748 294 aaKnown RBP eCLIP11.53□□□□□ -0.56
PDPR-210ENST00000568530 ARID4BQ4LE39 1312 aaPredicted RBP11.53□□□□□ -0.56
PDPR-210ENST00000568530 ANP32BQ92688 251 aaKnown RBP11.52□□□□□ -0.57
PDPR-210ENST00000568530 KRI1Q8N9T8 703 aaKnown RBP11.51□□□□□ -0.57
PDPR-210ENST00000568530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.5□□□□□ -0.57
PDPR-210ENST00000568530 ISY1Q9ULR0 285 aaKnown RBP11.48□□□□□ -0.57
PDPR-210ENST00000568530 TRHP20396 242 aaPredicted RBP11.47□□□□□ -0.57
PDPR-210ENST00000568530 ANO8Q9HCE9 1232 aaPredicted RBP11.47□□□□□ -0.57
PDPR-210ENST00000568530 ACIN1Q9UKV3 1341 aaKnown RBP11.46□□□□□ -0.57
PDPR-210ENST00000568530 FKBP8Q14318 412 aa11.45□□□□□ -0.58
PDPR-210ENST00000568530 SCRIBQ14160 1630 aa11.45□□□□□ -0.58
PDPR-210ENST00000568530 NBR1Q14596 966 aa11.43□□□□□ -0.58
PDPR-210ENST00000568530 IRX6P78412 446 aaPredicted RBP11.41□□□□□ -0.58
PDPR-210ENST00000568530 SENP3-EIF4A1A0A087X0R7 540 aa11.41□□□□□ -0.58
PDPR-210ENST00000568530 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
PDPR-210ENST00000568530 PPP1R15AO75807 674 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms