RNA–Protein interactions for RNA: ENST00000566787.1

LINC01290-201, Transcript of long intergenic non-protein coding RNA 1290, humanhuman

TSL 2 BASIC

Gene LINC01290, Length 502 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01290-201ENST00000566787 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
LINC01290-201ENST00000566787 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
LINC01290-201ENST00000566787 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
LINC01290-201ENST00000566787 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
LINC01290-201ENST00000566787 FOXD1Q16676 465 aa16■□□□□ 0.15
LINC01290-201ENST00000566787 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
LINC01290-201ENST00000566787 POTEDQ86YR6 584 aa15.5■□□□□ 0.07
LINC01290-201ENST00000566787 ADRA2BP18089 450 aa15.19■□□□□ 0.02
LINC01290-201ENST00000566787 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
LINC01290-201ENST00000566787 PIAS4Q8N2W9 510 aaPredicted RBP15.06■□□□□ 0
LINC01290-201ENST00000566787 MSH5O43196 834 aa14.87□□□□□ -0.03
LINC01290-201ENST00000566787 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
LINC01290-201ENST00000566787 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
LINC01290-201ENST00000566787 PPP4R3CPQ6ZMV5 832 aa13.83□□□□□ -0.2
LINC01290-201ENST00000566787 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
LINC01290-201ENST00000566787 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
LINC01290-201ENST00000566787 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
LINC01290-201ENST00000566787 HOXD11P31277 338 aaPredicted RBP13.28□□□□□ -0.28
LINC01290-201ENST00000566787 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
LINC01290-201ENST00000566787 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
LINC01290-201ENST00000566787 KCNA4P22459 653 aa13.2□□□□□ -0.3
LINC01290-201ENST00000566787 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
LINC01290-201ENST00000566787 CACNB1Q02641 598 aaPredicted RBP13.02□□□□□ -0.33
LINC01290-201ENST00000566787 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
LINC01290-201ENST00000566787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC01290-201ENST00000566787 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
LINC01290-201ENST00000566787 C1QBPQ07021 282 aaKnown RBP12.55□□□□□ -0.4
LINC01290-201ENST00000566787 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
LINC01290-201ENST00000566787 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
LINC01290-201ENST00000566787 U3KPZ7 1027 aaPredicted RBP12.43□□□□□ -0.42
LINC01290-201ENST00000566787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.23□□□□□ -0.45
LINC01290-201ENST00000566787 HNRNPUL2Q1KMD3 747 aaKnown RBP12.23□□□□□ -0.45
LINC01290-201ENST00000566787 FOXD4L1Q9NU39 408 aa12.22□□□□□ -0.45
LINC01290-201ENST00000566787 CAPN15O75808 1086 aa12.2□□□□□ -0.46
LINC01290-201ENST00000566787 MYCNP04198 464 aaPredicted RBP12.2□□□□□ -0.46
LINC01290-201ENST00000566787 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
LINC01290-201ENST00000566787 APLP2Q06481 763 aa12.18□□□□□ -0.46
LINC01290-201ENST00000566787 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
LINC01290-201ENST00000566787 ZBTB22O15209 634 aa12.11□□□□□ -0.47
LINC01290-201ENST00000566787 TRHP20396 242 aaPredicted RBP12.08□□□□□ -0.48
LINC01290-201ENST00000566787 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
LINC01290-201ENST00000566787 POTEHQ6S545 545 aa12.01□□□□□ -0.49
LINC01290-201ENST00000566787 DSG3P32926 999 aa12□□□□□ -0.49
LINC01290-201ENST00000566787 ABCB7O75027 752 aa11.93□□□□□ -0.5
LINC01290-201ENST00000566787 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
LINC01290-201ENST00000566787 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
LINC01290-201ENST00000566787 CSRNP3Q8WYN3 585 aa11.84□□□□□ -0.51
LINC01290-201ENST00000566787 ATXN8OSP0DMR3 200 aa11.8□□□□□ -0.52
LINC01290-201ENST00000566787 POLA2Q14181 598 aa11.79□□□□□ -0.52
LINC01290-201ENST00000566787 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
LINC01290-201ENST00000566787 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
LINC01290-201ENST00000566787 FBLN2P98095 1184 aa11.45□□□□□ -0.58
LINC01290-201ENST00000566787 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
LINC01290-201ENST00000566787 MKRN4PQ13434 485 aaPredicted RBP11.33□□□□□ -0.6
LINC01290-201ENST00000566787 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
LINC01290-201ENST00000566787 SPDYE2BA6NHP3 402 aa11.23□□□□□ -0.61
LINC01290-201ENST00000566787 SPDYE6P0CI01 402 aa11.23□□□□□ -0.61
LINC01290-201ENST00000566787 SPDYE2Q495Y8 402 aa11.23□□□□□ -0.61
LINC01290-201ENST00000566787 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
LINC01290-201ENST00000566787 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
LINC01290-201ENST00000566787 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
LINC01290-201ENST00000566787 SSUH2Q9Y2M2 353 aa11.08□□□□□ -0.64
LINC01290-201ENST00000566787 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
LINC01290-201ENST00000566787 PABPN1Q86U42 306 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC01290-201ENST00000566787 SPDYE4A6NLX3 237 aa10.99□□□□□ -0.65
LINC01290-201ENST00000566787 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
LINC01290-201ENST00000566787 SPDYE1Q8NFV5 336 aaPredicted RBP10.98□□□□□ -0.65
LINC01290-201ENST00000566787 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
LINC01290-201ENST00000566787 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
LINC01290-201ENST00000566787 FXR2P51116 673 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC01290-201ENST00000566787 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
LINC01290-201ENST00000566787 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
LINC01290-201ENST00000566787 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
LINC01290-201ENST00000566787 FKBP8Q14318 412 aa10.77□□□□□ -0.69
LINC01290-201ENST00000566787 CHADLQ6NUI6 762 aa10.72□□□□□ -0.69
LINC01290-201ENST00000566787 PROM2Q8N271 834 aa10.69□□□□□ -0.7
LINC01290-201ENST00000566787 HAX1O00165 279 aa10.67□□□□□ -0.7
LINC01290-201ENST00000566787 CREBZFQ9NS37 354 aa10.59□□□□□ -0.71
LINC01290-201ENST00000566787 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
LINC01290-201ENST00000566787 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
LINC01290-201ENST00000566787 EVX2Q03828 476 aa10.49□□□□□ -0.73
LINC01290-201ENST00000566787 MIER1Q8N108 512 aa10.49□□□□□ -0.73
LINC01290-201ENST00000566787 PLEKHG5O94827 1062 aa10.47□□□□□ -0.73
LINC01290-201ENST00000566787 NPM1P06748 294 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC01290-201ENST00000566787 CD44P16070 742 aaKnown RBP10.45□□□□□ -0.74
LINC01290-201ENST00000566787 PLCD3Q8N3E9 789 aa10.45□□□□□ -0.74
LINC01290-201ENST00000566787 FBXO3Q9UK99 471 aa10.45□□□□□ -0.74
LINC01290-201ENST00000566787 MNX1P50219 401 aaPredicted RBP10.41□□□□□ -0.74
LINC01290-201ENST00000566787 PAK3O75914 559 aaPredicted RBP10.36□□□□□ -0.75
LINC01290-201ENST00000566787 ZRANB1Q9UGI0 708 aa10.36□□□□□ -0.75
LINC01290-201ENST00000566787 ZBTB47Q9UFB7 747 aaPredicted RBP10.32□□□□□ -0.76
LINC01290-201ENST00000566787 GABBR2O75899 941 aa10.29□□□□□ -0.76
LINC01290-201ENST00000566787 VASPP50552 380 aaPredicted RBP10.29□□□□□ -0.76
LINC01290-201ENST00000566787 TSPYL2Q9H2G4 693 aaPredicted RBP10.28□□□□□ -0.76
LINC01290-201ENST00000566787 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
LINC01290-201ENST00000566787 LHX8Q68G74 356 aa10.25□□□□□ -0.77
LINC01290-201ENST00000566787 KLHL34Q8N239 644 aa10.25□□□□□ -0.77
LINC01290-201ENST00000566787 CLCN6P51797 869 aa10.22□□□□□ -0.77
LINC01290-201ENST00000566787 RASEFQ8IZ41 740 aa10.22□□□□□ -0.77
LINC01290-201ENST00000566787 PHF12Q96QT6 1004 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms