RNA–Protein interactions for RNA: ENST00000565993.1

AC055855.2-201, humanhuman

TSL 2 BASIC

Gene AC055855.2, Length 500 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.2-201ENST00000565993 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
AC055855.2-201ENST00000565993 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
AC055855.2-201ENST00000565993 SENP3Q9H4L4 574 aaPredicted RBP24.73■■□□□ 1.55
AC055855.2-201ENST00000565993 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
AC055855.2-201ENST00000565993 FOXD1Q16676 465 aa22.99■■□□□ 1.27
AC055855.2-201ENST00000565993 PLPPR3Q6T4P5 718 aa21.78■■□□□ 1.08
AC055855.2-201ENST00000565993 MSH5O43196 834 aa21.68■■□□□ 1.06
AC055855.2-201ENST00000565993 PIAS4Q8N2W9 510 aaPredicted RBP21.47■■□□□ 1.03
AC055855.2-201ENST00000565993 POTEDQ86YR6 584 aa21.33■■□□□ 1.01
AC055855.2-201ENST00000565993 PPP6R1Q9UPN7 881 aa21.33■■□□□ 1.01
AC055855.2-201ENST00000565993 ADRA2BP18089 450 aa21.26■□□□□ 0.99
AC055855.2-201ENST00000565993 SCAF1Q9H7N4 1312 aaKnown RBP19.58■□□□□ 0.73
AC055855.2-201ENST00000565993 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
AC055855.2-201ENST00000565993 MAPK8IP2Q13387 824 aaPredicted RBP19.55■□□□□ 0.72
AC055855.2-201ENST00000565993 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
AC055855.2-201ENST00000565993 HOXD11P31277 338 aaPredicted RBP18.8■□□□□ 0.6
AC055855.2-201ENST00000565993 CNKSR2Q8WXI2 1034 aa18.75■□□□□ 0.59
AC055855.2-201ENST00000565993 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
AC055855.2-201ENST00000565993 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
AC055855.2-201ENST00000565993 RNF216Q9NWF9 866 aaPredicted RBP18.63■□□□□ 0.57
AC055855.2-201ENST00000565993 RNF39Q9H2S5 420 aa18.44■□□□□ 0.54
AC055855.2-201ENST00000565993 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
AC055855.2-201ENST00000565993 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
AC055855.2-201ENST00000565993 C1QBPQ07021 282 aaKnown RBP18.2■□□□□ 0.5
AC055855.2-201ENST00000565993 NPM3O75607 178 aaKnown RBP17.98■□□□□ 0.47
AC055855.2-201ENST00000565993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.88■□□□□ 0.45
AC055855.2-201ENST00000565993 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
AC055855.2-201ENST00000565993 KCNA4P22459 653 aa17.46■□□□□ 0.39
AC055855.2-201ENST00000565993 CAPN15O75808 1086 aa17.25■□□□□ 0.35
AC055855.2-201ENST00000565993 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
AC055855.2-201ENST00000565993 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
AC055855.2-201ENST00000565993 DSG3P32926 999 aa17.19■□□□□ 0.34
AC055855.2-201ENST00000565993 APLP2Q06481 763 aa17.1■□□□□ 0.33
AC055855.2-201ENST00000565993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
AC055855.2-201ENST00000565993 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
AC055855.2-201ENST00000565993 ZNF219Q9P2Y4 722 aaPredicted RBP16.97■□□□□ 0.31
AC055855.2-201ENST00000565993 TRHP20396 242 aaPredicted RBP16.91■□□□□ 0.3
AC055855.2-201ENST00000565993 SAMD1Q6SPF0 538 aaPredicted RBP16.9■□□□□ 0.3
AC055855.2-201ENST00000565993 ABCB7O75027 752 aa16.79■□□□□ 0.28
AC055855.2-201ENST00000565993 POTEHQ6S545 545 aa16.71■□□□□ 0.27
AC055855.2-201ENST00000565993 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
AC055855.2-201ENST00000565993 RBM42Q9BTD8 480 aaKnown RBP16.49■□□□□ 0.23
AC055855.2-201ENST00000565993 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
AC055855.2-201ENST00000565993 POLA2Q14181 598 aa16.43■□□□□ 0.22
AC055855.2-201ENST00000565993 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
AC055855.2-201ENST00000565993 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
AC055855.2-201ENST00000565993 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
AC055855.2-201ENST00000565993 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
AC055855.2-201ENST00000565993 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
AC055855.2-201ENST00000565993 ZBTB22O15209 634 aa16.03■□□□□ 0.16
AC055855.2-201ENST00000565993 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
AC055855.2-201ENST00000565993 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
AC055855.2-201ENST00000565993 REM2Q8IYK8 340 aaPredicted RBP15.85■□□□□ 0.13
AC055855.2-201ENST00000565993 FBLN2P98095 1184 aa15.7■□□□□ 0.1
AC055855.2-201ENST00000565993 PIP4P2Q8N4L2 257 aa15.69■□□□□ 0.1
AC055855.2-201ENST00000565993 PITPNM1O00562 1244 aa15.68■□□□□ 0.1
AC055855.2-201ENST00000565993 SPDYE2BA6NHP3 402 aa15.65■□□□□ 0.1
AC055855.2-201ENST00000565993 SPDYE6P0CI01 402 aa15.65■□□□□ 0.1
AC055855.2-201ENST00000565993 SPDYE2Q495Y8 402 aa15.65■□□□□ 0.1
AC055855.2-201ENST00000565993 FXR2P51116 673 aaKnown RBP eCLIP15.6■□□□□ 0.09
AC055855.2-201ENST00000565993 SP7Q8TDD2 431 aaPredicted RBP15.6■□□□□ 0.09
AC055855.2-201ENST00000565993 MKRN4PQ13434 485 aaPredicted RBP15.48■□□□□ 0.07
AC055855.2-201ENST00000565993 HAX1O00165 279 aa15.44■□□□□ 0.06
AC055855.2-201ENST00000565993 SPDYE1Q8NFV5 336 aaPredicted RBP15.41■□□□□ 0.06
AC055855.2-201ENST00000565993 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
AC055855.2-201ENST00000565993 ZNF692Q9BU19 519 aaPredicted RBP15.39■□□□□ 0.05
AC055855.2-201ENST00000565993 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
AC055855.2-201ENST00000565993 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.04
AC055855.2-201ENST00000565993 EVX2Q03828 476 aa15.17■□□□□ 0.02
AC055855.2-201ENST00000565993 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
AC055855.2-201ENST00000565993 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
AC055855.2-201ENST00000565993 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
AC055855.2-201ENST00000565993 PRR29P0C7W0 189 aa15.09■□□□□ 0.01
AC055855.2-201ENST00000565993 CHADLQ6NUI6 762 aa15.02■□□□□ -0
AC055855.2-201ENST00000565993 GABBR2O75899 941 aa14.89□□□□□ -0.03
AC055855.2-201ENST00000565993 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
AC055855.2-201ENST00000565993 FARP1Q9Y4F1 1045 aaPredicted RBP14.84□□□□□ -0.03
AC055855.2-201ENST00000565993 CD44P16070 742 aaKnown RBP14.79□□□□□ -0.04
AC055855.2-201ENST00000565993 STAG3Q9UJ98 1225 aa14.79□□□□□ -0.04
AC055855.2-201ENST00000565993 CLCN6P51797 869 aa14.75□□□□□ -0.05
AC055855.2-201ENST00000565993 SPDYE4A6NLX3 237 aa14.71□□□□□ -0.05
AC055855.2-201ENST00000565993 CREBZFQ9NS37 354 aa14.65□□□□□ -0.06
AC055855.2-201ENST00000565993 LHX8Q68G74 356 aa14.62□□□□□ -0.07
AC055855.2-201ENST00000565993 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
AC055855.2-201ENST00000565993 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
AC055855.2-201ENST00000565993 POTEIP0CG38 1075 aa14.54□□□□□ -0.08
AC055855.2-201ENST00000565993 DCBLD2Q96PD2 775 aa14.48□□□□□ -0.09
AC055855.2-201ENST00000565993 PAK3O75914 559 aaPredicted RBP14.46□□□□□ -0.09
AC055855.2-201ENST00000565993 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
AC055855.2-201ENST00000565993 MNX1P50219 401 aaPredicted RBP14.38□□□□□ -0.11
AC055855.2-201ENST00000565993 PROM2Q8N271 834 aa14.37□□□□□ -0.11
AC055855.2-201ENST00000565993 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
AC055855.2-201ENST00000565993 PHF12Q96QT6 1004 aa14.3□□□□□ -0.12
AC055855.2-201ENST00000565993 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
AC055855.2-201ENST00000565993 MS4A3Q96HJ5 214 aa14.12□□□□□ -0.15
AC055855.2-201ENST00000565993 ASTLQ6HA08 431 aaPredicted RBP14.11□□□□□ -0.15
AC055855.2-201ENST00000565993 TSPYL2Q9H2G4 693 aaPredicted RBP14.09□□□□□ -0.15
AC055855.2-201ENST00000565993 CCDC61Q9Y6R9 512 aa14.08□□□□□ -0.16
AC055855.2-201ENST00000565993 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
AC055855.2-201ENST00000565993 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms