RNA–Protein interactions for RNA: ENST00000565774.5

TM6SF1-207, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-207ENST00000565774 AEBP2Q6ZN18 517 aaPredicted RBP30.11■■■□□ 2.41
TM6SF1-207ENST00000565774 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
TM6SF1-207ENST00000565774 PHF23Q9BUL5 403 aaPredicted RBP26.09■■□□□ 1.77
TM6SF1-207ENST00000565774 SENP3Q9H4L4 574 aaPredicted RBP25.69■■□□□ 1.7
TM6SF1-207ENST00000565774 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
TM6SF1-207ENST00000565774 FOXD1Q16676 465 aa23.7■■□□□ 1.38
TM6SF1-207ENST00000565774 ADRA2BP18089 450 aa22.97■■□□□ 1.27
TM6SF1-207ENST00000565774 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
TM6SF1-207ENST00000565774 PIAS4Q8N2W9 510 aaPredicted RBP22.49■■□□□ 1.19
TM6SF1-207ENST00000565774 MSH5O43196 834 aa21.9■■□□□ 1.1
TM6SF1-207ENST00000565774 PPP4R3CPQ6ZMV5 832 aa21.42■■□□□ 1.02
TM6SF1-207ENST00000565774 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
TM6SF1-207ENST00000565774 KCNA4P22459 653 aa21.16■□□□□ 0.98
TM6SF1-207ENST00000565774 NCBP3Q53F19 620 aaKnown RBP21.05■□□□□ 0.96
TM6SF1-207ENST00000565774 CNKSR2Q8WXI2 1034 aa20.81■□□□□ 0.92
TM6SF1-207ENST00000565774 MAPK8IP2Q13387 824 aaPredicted RBP20.73■□□□□ 0.91
TM6SF1-207ENST00000565774 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
TM6SF1-207ENST00000565774 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
TM6SF1-207ENST00000565774 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
TM6SF1-207ENST00000565774 SLC4A1APQ9BWU0 796 aaKnown RBP20.26■□□□□ 0.83
TM6SF1-207ENST00000565774 HOXD11P31277 338 aaPredicted RBP20.16■□□□□ 0.82
TM6SF1-207ENST00000565774 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
TM6SF1-207ENST00000565774 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
TM6SF1-207ENST00000565774 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
TM6SF1-207ENST00000565774 CSRNP3Q8WYN3 585 aa19.53■□□□□ 0.72
TM6SF1-207ENST00000565774 FOXD4L1Q9NU39 408 aa19.48■□□□□ 0.71
TM6SF1-207ENST00000565774 ZBTB22O15209 634 aa19.41■□□□□ 0.7
TM6SF1-207ENST00000565774 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
TM6SF1-207ENST00000565774 SLC4A2P04920 1241 aa19.35■□□□□ 0.69
TM6SF1-207ENST00000565774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.28■□□□□ 0.68
TM6SF1-207ENST00000565774 MYCNP04198 464 aaPredicted RBP19.11■□□□□ 0.65
TM6SF1-207ENST00000565774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.91■□□□□ 0.62
TM6SF1-207ENST00000565774 HNRNPUL2Q1KMD3 747 aaKnown RBP18.91■□□□□ 0.62
TM6SF1-207ENST00000565774 U3KPZ7 1027 aaPredicted RBP18.9■□□□□ 0.62
TM6SF1-207ENST00000565774 SAMD1Q6SPF0 538 aaPredicted RBP18.82■□□□□ 0.6
TM6SF1-207ENST00000565774 ATXN8OSP0DMR3 200 aa18.81■□□□□ 0.6
TM6SF1-207ENST00000565774 APLP2Q06481 763 aa18.71■□□□□ 0.59
TM6SF1-207ENST00000565774 RNF39Q9H2S5 420 aa18.7■□□□□ 0.58
TM6SF1-207ENST00000565774 C1QBPQ07021 282 aaKnown RBP18.56■□□□□ 0.56
TM6SF1-207ENST00000565774 ATF5Q9Y2D1 282 aaPredicted RBP18.42■□□□□ 0.54
TM6SF1-207ENST00000565774 ZNF219Q9P2Y4 722 aaPredicted RBP18.32■□□□□ 0.52
TM6SF1-207ENST00000565774 CAPN15O75808 1086 aa18.3■□□□□ 0.52
TM6SF1-207ENST00000565774 SPINK5Q9NQ38 1064 aaPredicted RBP18.29■□□□□ 0.52
TM6SF1-207ENST00000565774 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
TM6SF1-207ENST00000565774 CACNB1Q02641 598 aaPredicted RBP18.1■□□□□ 0.49
TM6SF1-207ENST00000565774 POLA2Q14181 598 aa18■□□□□ 0.47
TM6SF1-207ENST00000565774 ABCB7O75027 752 aa17.92■□□□□ 0.46
TM6SF1-207ENST00000565774 DSG3P32926 999 aa17.86■□□□□ 0.45
TM6SF1-207ENST00000565774 FBLN2P98095 1184 aa17.84■□□□□ 0.45
TM6SF1-207ENST00000565774 ZBTB12Q9Y330 459 aaPredicted RBP17.84■□□□□ 0.45
TM6SF1-207ENST00000565774 FKBP8Q14318 412 aa17.71■□□□□ 0.43
TM6SF1-207ENST00000565774 MKRN4PQ13434 485 aaPredicted RBP17.67■□□□□ 0.42
TM6SF1-207ENST00000565774 SPDYE4A6NLX3 237 aa17.49■□□□□ 0.39
TM6SF1-207ENST00000565774 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
TM6SF1-207ENST00000565774 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
TM6SF1-207ENST00000565774 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
TM6SF1-207ENST00000565774 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
TM6SF1-207ENST00000565774 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
TM6SF1-207ENST00000565774 PROM2Q8N271 834 aa17.17■□□□□ 0.34
TM6SF1-207ENST00000565774 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
TM6SF1-207ENST00000565774 SSUH2Q9Y2M2 353 aa17.14■□□□□ 0.33
TM6SF1-207ENST00000565774 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
TM6SF1-207ENST00000565774 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
TM6SF1-207ENST00000565774 AKT1S1Q96B36 256 aa16.94■□□□□ 0.3
TM6SF1-207ENST00000565774 STAG3Q9UJ98 1225 aa16.88■□□□□ 0.29
TM6SF1-207ENST00000565774 VASPP50552 380 aaPredicted RBP16.81■□□□□ 0.28
TM6SF1-207ENST00000565774 SPDYE1Q8NFV5 336 aaPredicted RBP16.76■□□□□ 0.27
TM6SF1-207ENST00000565774 REM2Q8IYK8 340 aaPredicted RBP16.72■□□□□ 0.27
TM6SF1-207ENST00000565774 CLEC11AQ9Y240 323 aa16.64■□□□□ 0.25
TM6SF1-207ENST00000565774 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
TM6SF1-207ENST00000565774 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
TM6SF1-207ENST00000565774 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
TM6SF1-207ENST00000565774 MIER1Q8N108 512 aa16.59■□□□□ 0.25
TM6SF1-207ENST00000565774 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
TM6SF1-207ENST00000565774 PITPNM1O00562 1244 aa16.52■□□□□ 0.24
TM6SF1-207ENST00000565774 IFNLR1Q8IU57 520 aaPredicted RBP16.52■□□□□ 0.24
TM6SF1-207ENST00000565774 KLHL34Q8N239 644 aa16.52■□□□□ 0.24
TM6SF1-207ENST00000565774 ZBTB47Q9UFB7 747 aaPredicted RBP16.49■□□□□ 0.23
TM6SF1-207ENST00000565774 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
TM6SF1-207ENST00000565774 SPOCK2Q92563 424 aa16.38■□□□□ 0.21
TM6SF1-207ENST00000565774 CREBZFQ9NS37 354 aa16.3■□□□□ 0.2
TM6SF1-207ENST00000565774 CHRDL2Q6WN34 429 aa16.26■□□□□ 0.19
TM6SF1-207ENST00000565774 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
TM6SF1-207ENST00000565774 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.18
TM6SF1-207ENST00000565774 PRKAR2AP13861 404 aaKnown RBP16.14■□□□□ 0.17
TM6SF1-207ENST00000565774 MNX1P50219 401 aaPredicted RBP16.13■□□□□ 0.17
TM6SF1-207ENST00000565774 CHADLQ6NUI6 762 aa16.13■□□□□ 0.17
TM6SF1-207ENST00000565774 CIZ1Q9ULV3 898 aaPredicted RBP16.09■□□□□ 0.17
TM6SF1-207ENST00000565774 PIP4P2Q8N4L2 257 aa16.07■□□□□ 0.16
TM6SF1-207ENST00000565774 FARP1Q9Y4F1 1045 aaPredicted RBP16.07■□□□□ 0.16
TM6SF1-207ENST00000565774 NUBP1P53384 320 aa16.06■□□□□ 0.16
TM6SF1-207ENST00000565774 GSE1Q14687 1217 aa16.06■□□□□ 0.16
TM6SF1-207ENST00000565774 PKD2Q13563 968 aa16.05■□□□□ 0.16
TM6SF1-207ENST00000565774 FAM212AQ96EL1 285 aa16.04■□□□□ 0.16
TM6SF1-207ENST00000565774 ECM2O94769 699 aaPredicted RBP16.01■□□□□ 0.15
TM6SF1-207ENST00000565774 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
TM6SF1-207ENST00000565774 DCAF8Q5TAQ9 597 aa16■□□□□ 0.15
TM6SF1-207ENST00000565774 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
TM6SF1-207ENST00000565774 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
TM6SF1-207ENST00000565774 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms