RNA–Protein interactions for RNA: ENST00000565441.1

AC079411.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC079411.1, Length 795 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079411.1-201ENST00000565441 AEBP2Q6ZN18 517 aaPredicted RBP30.92■■■□□ 2.54
AC079411.1-201ENST00000565441 CHIC1Q5VXU3 224 aa29.33■■■□□ 2.29
AC079411.1-201ENST00000565441 SENP3Q9H4L4 574 aaPredicted RBP26.23■■□□□ 1.79
AC079411.1-201ENST00000565441 PHF23Q9BUL5 403 aaPredicted RBP25.96■■□□□ 1.75
AC079411.1-201ENST00000565441 FOXD1Q16676 465 aa24.54■■□□□ 1.52
AC079411.1-201ENST00000565441 PLPPR3Q6T4P5 718 aa23.41■■□□□ 1.34
AC079411.1-201ENST00000565441 PPP6R1Q9UPN7 881 aa23.03■■□□□ 1.28
AC079411.1-201ENST00000565441 ADRA2BP18089 450 aa22.95■■□□□ 1.26
AC079411.1-201ENST00000565441 PIAS4Q8N2W9 510 aaPredicted RBP22.89■■□□□ 1.25
AC079411.1-201ENST00000565441 MSH5O43196 834 aa22.82■■□□□ 1.24
AC079411.1-201ENST00000565441 POTEDQ86YR6 584 aa22.29■■□□□ 1.16
AC079411.1-201ENST00000565441 MAPK8IP2Q13387 824 aaPredicted RBP21.09■□□□□ 0.97
AC079411.1-201ENST00000565441 DMRT2Q9Y5R5 561 aa20.85■□□□□ 0.93
AC079411.1-201ENST00000565441 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
AC079411.1-201ENST00000565441 PPP4R3CPQ6ZMV5 832 aa20.58■□□□□ 0.89
AC079411.1-201ENST00000565441 CNKSR2Q8WXI2 1034 aa20.13■□□□□ 0.81
AC079411.1-201ENST00000565441 HOXD11P31277 338 aaPredicted RBP20.1■□□□□ 0.81
AC079411.1-201ENST00000565441 DCAF8L1A6NGE4 600 aa20■□□□□ 0.79
AC079411.1-201ENST00000565441 RNF216Q9NWF9 866 aaPredicted RBP19.94■□□□□ 0.78
AC079411.1-201ENST00000565441 NCBP3Q53F19 620 aaKnown RBP19.71■□□□□ 0.75
AC079411.1-201ENST00000565441 CACNB1Q02641 598 aaPredicted RBP19.6■□□□□ 0.73
AC079411.1-201ENST00000565441 NPM3O75607 178 aaKnown RBP19.54■□□□□ 0.72
AC079411.1-201ENST00000565441 RNF39Q9H2S5 420 aa19.54■□□□□ 0.72
AC079411.1-201ENST00000565441 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
AC079411.1-201ENST00000565441 KCNA4P22459 653 aa19.25■□□□□ 0.67
AC079411.1-201ENST00000565441 C1QBPQ07021 282 aaKnown RBP19.2■□□□□ 0.66
AC079411.1-201ENST00000565441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.13■□□□□ 0.65
AC079411.1-201ENST00000565441 U3KPZ7 1027 aaPredicted RBP18.8■□□□□ 0.6
AC079411.1-201ENST00000565441 SLC4A2P04920 1241 aa18.68■□□□□ 0.58
AC079411.1-201ENST00000565441 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
AC079411.1-201ENST00000565441 CAPN15O75808 1086 aa18.43■□□□□ 0.54
AC079411.1-201ENST00000565441 DSG3P32926 999 aa18.33■□□□□ 0.52
AC079411.1-201ENST00000565441 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
AC079411.1-201ENST00000565441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
AC079411.1-201ENST00000565441 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
AC079411.1-201ENST00000565441 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
AC079411.1-201ENST00000565441 APLP2Q06481 763 aa18.09■□□□□ 0.49
AC079411.1-201ENST00000565441 ABCB7O75027 752 aa18.07■□□□□ 0.48
AC079411.1-201ENST00000565441 SAMD1Q6SPF0 538 aaPredicted RBP18.07■□□□□ 0.48
AC079411.1-201ENST00000565441 ZNF219Q9P2Y4 722 aaPredicted RBP18.05■□□□□ 0.48
AC079411.1-201ENST00000565441 MYCNP04198 464 aaPredicted RBP18■□□□□ 0.47
AC079411.1-201ENST00000565441 FOXD4L1Q9NU39 408 aa17.87■□□□□ 0.45
AC079411.1-201ENST00000565441 ZBTB22O15209 634 aa17.74■□□□□ 0.43
AC079411.1-201ENST00000565441 ATF5Q9Y2D1 282 aaPredicted RBP17.72■□□□□ 0.43
AC079411.1-201ENST00000565441 POLA2Q14181 598 aa17.69■□□□□ 0.42
AC079411.1-201ENST00000565441 POTEHQ6S545 545 aa17.44■□□□□ 0.38
AC079411.1-201ENST00000565441 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
AC079411.1-201ENST00000565441 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
AC079411.1-201ENST00000565441 ZBTB12Q9Y330 459 aaPredicted RBP17.22■□□□□ 0.35
AC079411.1-201ENST00000565441 OSCARQ8IYS5 282 aa17.15■□□□□ 0.34
AC079411.1-201ENST00000565441 CHRDL2Q6WN34 429 aa17.06■□□□□ 0.32
AC079411.1-201ENST00000565441 AKT1S1Q96B36 256 aa17.04■□□□□ 0.32
AC079411.1-201ENST00000565441 REM2Q8IYK8 340 aaPredicted RBP16.94■□□□□ 0.3
AC079411.1-201ENST00000565441 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
AC079411.1-201ENST00000565441 MKRN4PQ13434 485 aaPredicted RBP16.88■□□□□ 0.29
AC079411.1-201ENST00000565441 FBLN2P98095 1184 aa16.87■□□□□ 0.29
AC079411.1-201ENST00000565441 PITPNM1O00562 1244 aa16.77■□□□□ 0.28
AC079411.1-201ENST00000565441 SPDYE2BA6NHP3 402 aa16.75■□□□□ 0.27
AC079411.1-201ENST00000565441 SPDYE6P0CI01 402 aa16.75■□□□□ 0.27
AC079411.1-201ENST00000565441 SPDYE2Q495Y8 402 aa16.75■□□□□ 0.27
AC079411.1-201ENST00000565441 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
AC079411.1-201ENST00000565441 PIP4P2Q8N4L2 257 aa16.7■□□□□ 0.26
AC079411.1-201ENST00000565441 FXR2P51116 673 aaKnown RBP eCLIP16.59■□□□□ 0.25
AC079411.1-201ENST00000565441 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
AC079411.1-201ENST00000565441 SSUH2Q9Y2M2 353 aa16.58■□□□□ 0.24
AC079411.1-201ENST00000565441 CLEC11AQ9Y240 323 aa16.46■□□□□ 0.23
AC079411.1-201ENST00000565441 SPDYE1Q8NFV5 336 aaPredicted RBP16.44■□□□□ 0.22
AC079411.1-201ENST00000565441 PABPN1Q86U42 306 aaKnown RBP eCLIP16.37■□□□□ 0.21
AC079411.1-201ENST00000565441 SP7Q8TDD2 431 aaPredicted RBP16.37■□□□□ 0.21
AC079411.1-201ENST00000565441 HAX1O00165 279 aa16.35■□□□□ 0.21
AC079411.1-201ENST00000565441 PRKAR2AP13861 404 aaKnown RBP16.32■□□□□ 0.2
AC079411.1-201ENST00000565441 EVX2Q03828 476 aa16.27■□□□□ 0.2
AC079411.1-201ENST00000565441 CHADLQ6NUI6 762 aa16.2■□□□□ 0.18
AC079411.1-201ENST00000565441 PRR29P0C7W0 189 aa16.16■□□□□ 0.18
AC079411.1-201ENST00000565441 C19orf67A6NJJ6 358 aa16.06■□□□□ 0.16
AC079411.1-201ENST00000565441 SPDYE4A6NLX3 237 aa16.04■□□□□ 0.16
AC079411.1-201ENST00000565441 FARP1Q9Y4F1 1045 aaPredicted RBP15.91■□□□□ 0.14
AC079411.1-201ENST00000565441 CREBZFQ9NS37 354 aa15.84■□□□□ 0.13
AC079411.1-201ENST00000565441 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
AC079411.1-201ENST00000565441 GABBR2O75899 941 aa15.82■□□□□ 0.12
AC079411.1-201ENST00000565441 CD44P16070 742 aaKnown RBP15.8■□□□□ 0.12
AC079411.1-201ENST00000565441 PROM2Q8N271 834 aa15.67■□□□□ 0.1
AC079411.1-201ENST00000565441 MNX1P50219 401 aaPredicted RBP15.59■□□□□ 0.09
AC079411.1-201ENST00000565441 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
AC079411.1-201ENST00000565441 POTEIP0CG38 1075 aa15.55■□□□□ 0.08
AC079411.1-201ENST00000565441 ZNF579Q8NAF0 562 aaKnown RBP15.54■□□□□ 0.08
AC079411.1-201ENST00000565441 NPM1P06748 294 aaKnown RBP eCLIP15.44■□□□□ 0.06
AC079411.1-201ENST00000565441 CLCN6P51797 869 aa15.43■□□□□ 0.06
AC079411.1-201ENST00000565441 PHF12Q96QT6 1004 aa15.43■□□□□ 0.06
AC079411.1-201ENST00000565441 GALR2O43603 387 aaPredicted RBP15.41■□□□□ 0.06
AC079411.1-201ENST00000565441 PAK3O75914 559 aaPredicted RBP15.38■□□□□ 0.05
AC079411.1-201ENST00000565441 LHX8Q68G74 356 aa15.36■□□□□ 0.05
AC079411.1-201ENST00000565441 DCBLD2Q96PD2 775 aa15.35■□□□□ 0.05
AC079411.1-201ENST00000565441 FKBP8Q14318 412 aa15.33■□□□□ 0.04
AC079411.1-201ENST00000565441 MIER1Q8N108 512 aa15.28■□□□□ 0.04
AC079411.1-201ENST00000565441 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
AC079411.1-201ENST00000565441 MS4A3Q96HJ5 214 aa15.21■□□□□ 0.03
AC079411.1-201ENST00000565441 CCDC61Q9Y6R9 512 aa15.18■□□□□ 0.02
AC079411.1-201ENST00000565441 RASEFQ8IZ41 740 aa15.16■□□□□ 0.02
AC079411.1-201ENST00000565441 PLCD3Q8N3E9 789 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms