RNA–Protein interactions for RNA: ENST00000564513.1

AC104066.2-201, humanhuman

TSL 3 BASIC

Gene AC104066.2, Length 1,741 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104066.2-201ENST00000564513 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
AC104066.2-201ENST00000564513 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
AC104066.2-201ENST00000564513 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
AC104066.2-201ENST00000564513 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
AC104066.2-201ENST00000564513 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
AC104066.2-201ENST00000564513 POTEDQ86YR6 584 aa14.81□□□□□ -0.04
AC104066.2-201ENST00000564513 ADRA2BP18089 450 aa14.41□□□□□ -0.1
AC104066.2-201ENST00000564513 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
AC104066.2-201ENST00000564513 PPP6R1Q9UPN7 881 aa14.22□□□□□ -0.13
AC104066.2-201ENST00000564513 KCNA4P22459 653 aa14.15□□□□□ -0.14
AC104066.2-201ENST00000564513 FOXD1Q16676 465 aa14.1□□□□□ -0.15
AC104066.2-201ENST00000564513 MYT1Q01538 1121 aa14.09□□□□□ -0.15
AC104066.2-201ENST00000564513 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
AC104066.2-201ENST00000564513 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
AC104066.2-201ENST00000564513 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
AC104066.2-201ENST00000564513 TTBK1Q5TCY1 1321 aaPredicted RBP13.52□□□□□ -0.25
AC104066.2-201ENST00000564513 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
AC104066.2-201ENST00000564513 MSH5O43196 834 aa13.44□□□□□ -0.26
AC104066.2-201ENST00000564513 PIAS4Q8N2W9 510 aaPredicted RBP13.42□□□□□ -0.26
AC104066.2-201ENST00000564513 HRCP23327 699 aa13.37□□□□□ -0.27
AC104066.2-201ENST00000564513 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
AC104066.2-201ENST00000564513 NPM3O75607 178 aaKnown RBP13.24□□□□□ -0.29
AC104066.2-201ENST00000564513 ZBTB22O15209 634 aa13.1□□□□□ -0.31
AC104066.2-201ENST00000564513 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
AC104066.2-201ENST00000564513 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
AC104066.2-201ENST00000564513 NISCHQ9Y2I1 1504 aa12.82□□□□□ -0.36
AC104066.2-201ENST00000564513 MAPK8IP2Q13387 824 aaPredicted RBP12.73□□□□□ -0.37
AC104066.2-201ENST00000564513 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
AC104066.2-201ENST00000564513 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
AC104066.2-201ENST00000564513 PPARGC1BQ86YN6 1023 aaKnown RBP12.68□□□□□ -0.38
AC104066.2-201ENST00000564513 PRKCSHP14314 528 aaPredicted RBP12.62□□□□□ -0.39
AC104066.2-201ENST00000564513 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
AC104066.2-201ENST00000564513 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
AC104066.2-201ENST00000564513 ZEB1P37275 1124 aaPredicted RBP12.55□□□□□ -0.4
AC104066.2-201ENST00000564513 CENPBP07199 599 aaPredicted RBP12.54□□□□□ -0.4
AC104066.2-201ENST00000564513 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
AC104066.2-201ENST00000564513 APLP2Q06481 763 aa12.51□□□□□ -0.41
AC104066.2-201ENST00000564513 RNF216Q9NWF9 866 aaPredicted RBP12.49□□□□□ -0.41
AC104066.2-201ENST00000564513 ACIN1Q9UKV3 1341 aaKnown RBP12.49□□□□□ -0.41
AC104066.2-201ENST00000564513 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
AC104066.2-201ENST00000564513 DCAF1Q9Y4B6 1507 aa12.43□□□□□ -0.42
AC104066.2-201ENST00000564513 CCDC180Q9P1Z9 1646 aa12.42□□□□□ -0.42
AC104066.2-201ENST00000564513 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
AC104066.2-201ENST00000564513 SLC24A1O60721 1099 aa12.35□□□□□ -0.43
AC104066.2-201ENST00000564513 FAM9AQ8IZU1 332 aaPredicted RBP12.34□□□□□ -0.43
AC104066.2-201ENST00000564513 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
AC104066.2-201ENST00000564513 GTF3C3Q9Y5Q9 886 aa12.29□□□□□ -0.44
AC104066.2-201ENST00000564513 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.45
AC104066.2-201ENST00000564513 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
AC104066.2-201ENST00000564513 NEUROD1Q13562 356 aa12.25□□□□□ -0.45
AC104066.2-201ENST00000564513 DMRT2Q9Y5R5 561 aa12.24□□□□□ -0.45
AC104066.2-201ENST00000564513 TRIM26Q12899 539 aaPredicted RBP12.22□□□□□ -0.45
AC104066.2-201ENST00000564513 ANP32EQ9BTT0 268 aa12.21□□□□□ -0.45
AC104066.2-201ENST00000564513 FKBP8Q14318 412 aa12.17□□□□□ -0.46
AC104066.2-201ENST00000564513 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
AC104066.2-201ENST00000564513 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
AC104066.2-201ENST00000564513 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
AC104066.2-201ENST00000564513 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
AC104066.2-201ENST00000564513 ATF5Q9Y2D1 282 aaPredicted RBP11.94□□□□□ -0.5
AC104066.2-201ENST00000564513 DIEXFQ68CQ4 756 aaKnown RBP11.86□□□□□ -0.51
AC104066.2-201ENST00000564513 DAXXQ9UER7 740 aaPredicted RBP11.83□□□□□ -0.52
AC104066.2-201ENST00000564513 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
AC104066.2-201ENST00000564513 UBE2Q2Q8WVN8 375 aa11.76□□□□□ -0.53
AC104066.2-201ENST00000564513 TSHZ2Q9NRE2 1034 aa11.74□□□□□ -0.53
AC104066.2-201ENST00000564513 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.54
AC104066.2-201ENST00000564513 EIF5BO60841 1220 aaKnown RBP11.71□□□□□ -0.54
AC104066.2-201ENST00000564513 ERICH6BQ5W0A0 696 aa11.71□□□□□ -0.54
AC104066.2-201ENST00000564513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.69□□□□□ -0.54
AC104066.2-201ENST00000564513 SUPT5HO00267 1087 aaKnown RBP11.67□□□□□ -0.54
AC104066.2-201ENST00000564513 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
AC104066.2-201ENST00000564513 U3KPZ7 1027 aaPredicted RBP11.66□□□□□ -0.54
AC104066.2-201ENST00000564513 SUPT16HQ9Y5B9 1047 aaKnown RBP11.61□□□□□ -0.55
AC104066.2-201ENST00000564513 SAMD1Q6SPF0 538 aaPredicted RBP11.59□□□□□ -0.55
AC104066.2-201ENST00000564513 ANO8Q9HCE9 1232 aaPredicted RBP11.56□□□□□ -0.56
AC104066.2-201ENST00000564513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
AC104066.2-201ENST00000564513 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
AC104066.2-201ENST00000564513 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
AC104066.2-201ENST00000564513 ZNF219Q9P2Y4 722 aaPredicted RBP11.51□□□□□ -0.57
AC104066.2-201ENST00000564513 LOC105371045A0A1W2PR82 267 aa11.49□□□□□ -0.57
AC104066.2-201ENST00000564513 YTHDC1Q96MU7 727 aaKnown RBP11.49□□□□□ -0.57
AC104066.2-201ENST00000564513 CCER1Q8TC90 406 aaPredicted RBP11.48□□□□□ -0.57
AC104066.2-201ENST00000564513 FANCIQ9NVI1 1328 aa11.42□□□□□ -0.58
AC104066.2-201ENST00000564513 POTEHQ6S545 545 aa11.42□□□□□ -0.58
AC104066.2-201ENST00000564513 MKRN4PQ13434 485 aaPredicted RBP11.41□□□□□ -0.58
AC104066.2-201ENST00000564513 SPDYE4A6NLX3 237 aa11.4□□□□□ -0.58
AC104066.2-201ENST00000564513 PKNOX2Q96KN3 472 aa11.4□□□□□ -0.58
AC104066.2-201ENST00000564513 SHROOM4Q9ULL8 1493 aa11.4□□□□□ -0.58
AC104066.2-201ENST00000564513 RBM19Q9Y4C8 960 aaKnown RBP11.4□□□□□ -0.58
AC104066.2-201ENST00000564513 DEKP35659 375 aaKnown RBP11.39□□□□□ -0.59
AC104066.2-201ENST00000564513 MIER1Q8N108 512 aa11.38□□□□□ -0.59
AC104066.2-201ENST00000564513 PLCB2Q00722 1185 aa11.38□□□□□ -0.59
AC104066.2-201ENST00000564513 SALL2Q9Y467 1007 aaPredicted RBP11.38□□□□□ -0.59
AC104066.2-201ENST00000564513 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
AC104066.2-201ENST00000564513 PROM2Q8N271 834 aa11.33□□□□□ -0.6
AC104066.2-201ENST00000564513 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
AC104066.2-201ENST00000564513 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
AC104066.2-201ENST00000564513 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
AC104066.2-201ENST00000564513 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
AC104066.2-201ENST00000564513 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
AC104066.2-201ENST00000564513 GLIPR1L2Q4G1C9 344 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms