RNA–Protein interactions for RNA: ENST00000564495.5

ULK4P1-201, Transcript of ULK4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene ULK4P1, Length 875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4P1-201ENST00000564495 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
ULK4P1-201ENST00000564495 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
ULK4P1-201ENST00000564495 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
ULK4P1-201ENST00000564495 SENP3Q9H4L4 574 aaPredicted RBP21.74■■□□□ 1.07
ULK4P1-201ENST00000564495 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
ULK4P1-201ENST00000564495 FOXD1Q16676 465 aa20.14■□□□□ 0.81
ULK4P1-201ENST00000564495 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
ULK4P1-201ENST00000564495 ADRA2BP18089 450 aa19.55■□□□□ 0.72
ULK4P1-201ENST00000564495 PIAS4Q8N2W9 510 aaPredicted RBP19.04■□□□□ 0.64
ULK4P1-201ENST00000564495 MSH5O43196 834 aa18.48■□□□□ 0.55
ULK4P1-201ENST00000564495 PPP4R3CPQ6ZMV5 832 aa18.2■□□□□ 0.5
ULK4P1-201ENST00000564495 KCNA4P22459 653 aa18.05■□□□□ 0.48
ULK4P1-201ENST00000564495 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
ULK4P1-201ENST00000564495 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
ULK4P1-201ENST00000564495 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
ULK4P1-201ENST00000564495 MAPK8IP2Q13387 824 aaPredicted RBP17.66■□□□□ 0.42
ULK4P1-201ENST00000564495 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
ULK4P1-201ENST00000564495 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
ULK4P1-201ENST00000564495 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
ULK4P1-201ENST00000564495 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
ULK4P1-201ENST00000564495 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
ULK4P1-201ENST00000564495 HOXD11P31277 338 aaPredicted RBP17.14■□□□□ 0.33
ULK4P1-201ENST00000564495 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
ULK4P1-201ENST00000564495 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
ULK4P1-201ENST00000564495 CSRNP3Q8WYN3 585 aa16.71■□□□□ 0.27
ULK4P1-201ENST00000564495 ZBTB22O15209 634 aa16.62■□□□□ 0.25
ULK4P1-201ENST00000564495 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
ULK4P1-201ENST00000564495 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
ULK4P1-201ENST00000564495 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
ULK4P1-201ENST00000564495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.28■□□□□ 0.2
ULK4P1-201ENST00000564495 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
ULK4P1-201ENST00000564495 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
ULK4P1-201ENST00000564495 ATXN8OSP0DMR3 200 aa15.96■□□□□ 0.15
ULK4P1-201ENST00000564495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
ULK4P1-201ENST00000564495 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
ULK4P1-201ENST00000564495 SAMD1Q6SPF0 538 aaPredicted RBP15.9■□□□□ 0.14
ULK4P1-201ENST00000564495 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
ULK4P1-201ENST00000564495 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
ULK4P1-201ENST00000564495 APLP2Q06481 763 aa15.72■□□□□ 0.11
ULK4P1-201ENST00000564495 C1QBPQ07021 282 aaKnown RBP15.69■□□□□ 0.1
ULK4P1-201ENST00000564495 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
ULK4P1-201ENST00000564495 ZNF219Q9P2Y4 722 aaPredicted RBP15.48■□□□□ 0.07
ULK4P1-201ENST00000564495 CAPN15O75808 1086 aa15.46■□□□□ 0.07
ULK4P1-201ENST00000564495 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
ULK4P1-201ENST00000564495 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
ULK4P1-201ENST00000564495 POLA2Q14181 598 aa15.25■□□□□ 0.03
ULK4P1-201ENST00000564495 ABCB7O75027 752 aa15.19■□□□□ 0.02
ULK4P1-201ENST00000564495 DSG3P32926 999 aa15.18■□□□□ 0.02
ULK4P1-201ENST00000564495 MKRN4PQ13434 485 aaPredicted RBP15.09■□□□□ 0.01
ULK4P1-201ENST00000564495 FKBP8Q14318 412 aa15.07■□□□□ 0
ULK4P1-201ENST00000564495 FBLN2P98095 1184 aa15.05■□□□□ -0
ULK4P1-201ENST00000564495 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
ULK4P1-201ENST00000564495 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
ULK4P1-201ENST00000564495 OSCARQ8IYS5 282 aa14.74□□□□□ -0.05
ULK4P1-201ENST00000564495 PROM2Q8N271 834 aa14.68□□□□□ -0.06
ULK4P1-201ENST00000564495 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
ULK4P1-201ENST00000564495 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
ULK4P1-201ENST00000564495 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
ULK4P1-201ENST00000564495 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
ULK4P1-201ENST00000564495 SSUH2Q9Y2M2 353 aa14.59□□□□□ -0.07
ULK4P1-201ENST00000564495 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
ULK4P1-201ENST00000564495 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
ULK4P1-201ENST00000564495 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
ULK4P1-201ENST00000564495 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
ULK4P1-201ENST00000564495 VASPP50552 380 aaPredicted RBP14.29□□□□□ -0.12
ULK4P1-201ENST00000564495 NISCHQ9Y2I1 1504 aa14.29□□□□□ -0.12
ULK4P1-201ENST00000564495 STAG3Q9UJ98 1225 aa14.24□□□□□ -0.13
ULK4P1-201ENST00000564495 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
ULK4P1-201ENST00000564495 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
ULK4P1-201ENST00000564495 SPDYE1Q8NFV5 336 aaPredicted RBP14.16□□□□□ -0.14
ULK4P1-201ENST00000564495 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
ULK4P1-201ENST00000564495 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
ULK4P1-201ENST00000564495 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
ULK4P1-201ENST00000564495 PLCD3Q8N3E9 789 aa14.03□□□□□ -0.16
ULK4P1-201ENST00000564495 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
ULK4P1-201ENST00000564495 MIER1Q8N108 512 aa14.01□□□□□ -0.17
ULK4P1-201ENST00000564495 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
ULK4P1-201ENST00000564495 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
ULK4P1-201ENST00000564495 POTEHQ6S545 545 aa13.94□□□□□ -0.18
ULK4P1-201ENST00000564495 KLHL34Q8N239 644 aa13.94□□□□□ -0.18
ULK4P1-201ENST00000564495 SPOCK2Q92563 424 aa13.89□□□□□ -0.19
ULK4P1-201ENST00000564495 CREBZFQ9NS37 354 aa13.88□□□□□ -0.19
ULK4P1-201ENST00000564495 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
ULK4P1-201ENST00000564495 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
ULK4P1-201ENST00000564495 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
ULK4P1-201ENST00000564495 PKD2Q13563 968 aa13.73□□□□□ -0.21
ULK4P1-201ENST00000564495 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
ULK4P1-201ENST00000564495 CHADLQ6NUI6 762 aa13.71□□□□□ -0.21
ULK4P1-201ENST00000564495 NUBP1P53384 320 aa13.69□□□□□ -0.22
ULK4P1-201ENST00000564495 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
ULK4P1-201ENST00000564495 PIP4P2Q8N4L2 257 aa13.64□□□□□ -0.23
ULK4P1-201ENST00000564495 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
ULK4P1-201ENST00000564495 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
ULK4P1-201ENST00000564495 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
ULK4P1-201ENST00000564495 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.24
ULK4P1-201ENST00000564495 GSE1Q14687 1217 aa13.58□□□□□ -0.24
ULK4P1-201ENST00000564495 RASEFQ8IZ41 740 aa13.56□□□□□ -0.24
ULK4P1-201ENST00000564495 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
ULK4P1-201ENST00000564495 DCAF8Q5TAQ9 597 aa13.53□□□□□ -0.24
ULK4P1-201ENST00000564495 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms