RNA–Protein interactions for RNA: ENST00000564243.5

EIF3C-204, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2 BASIC

Gene EIF3C, Length 2,870 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-204ENST00000564243 NISCHQ9Y2I1 1504 aa25.48■■□□□ 1.67
EIF3C-204ENST00000564243 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
EIF3C-204ENST00000564243 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.05
EIF3C-204ENST00000564243 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.04
EIF3C-204ENST00000564243 SUPT5HO00267 1087 aaKnown RBP21.38■■□□□ 1.01
EIF3C-204ENST00000564243 DCAF8L2P0C7V8 631 aa21.28■■□□□ 1
EIF3C-204ENST00000564243 DCAF1Q9Y4B6 1507 aa20.84■□□□□ 0.93
EIF3C-204ENST00000564243 CHIC1Q5VXU3 224 aa20.74■□□□□ 0.91
EIF3C-204ENST00000564243 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.89
EIF3C-204ENST00000564243 SCRIBQ14160 1630 aa20.33■□□□□ 0.85
EIF3C-204ENST00000564243 ABCC9O60706 1549 aa20.27■□□□□ 0.84
EIF3C-204ENST00000564243 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
EIF3C-204ENST00000564243 LOC105371045A0A1W2PR82 267 aa20.19■□□□□ 0.82
EIF3C-204ENST00000564243 PCGF6Q9BYE7 350 aa20.07■□□□□ 0.8
EIF3C-204ENST00000564243 NACADO15069 1562 aa20.01■□□□□ 0.79
EIF3C-204ENST00000564243 HRCP23327 699 aa20■□□□□ 0.79
EIF3C-204ENST00000564243 CECR2Q9BXF3 1484 aa19.95■□□□□ 0.78
EIF3C-204ENST00000564243 RB1CC1Q8TDY2 1594 aa19.94■□□□□ 0.78
EIF3C-204ENST00000564243 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
EIF3C-204ENST00000564243 MROH2BQ7Z745 1585 aa19.85■□□□□ 0.77
EIF3C-204ENST00000564243 FAM9AQ8IZU1 332 aaPredicted RBP19.77■□□□□ 0.76
EIF3C-204ENST00000564243 WIZO95785 1651 aa19.72■□□□□ 0.75
EIF3C-204ENST00000564243 PPARGC1BQ86YN6 1023 aaKnown RBP19.68■□□□□ 0.74
EIF3C-204ENST00000564243 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
EIF3C-204ENST00000564243 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.73
EIF3C-204ENST00000564243 BAZ1AQ9NRL2 1556 aaPredicted RBP19.54■□□□□ 0.72
EIF3C-204ENST00000564243 UNC13AQ9UPW8 1703 aa19.41■□□□□ 0.7
EIF3C-204ENST00000564243 SMARCA4P51532 1647 aa19.39■□□□□ 0.69
EIF3C-204ENST00000564243 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.69
EIF3C-204ENST00000564243 PABPN1Q86U42 306 aaKnown RBP eCLIP19.36■□□□□ 0.69
EIF3C-204ENST00000564243 TOP2AP11388 1531 aaKnown RBP19.36■□□□□ 0.69
EIF3C-204ENST00000564243 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
EIF3C-204ENST00000564243 ABCC8Q09428 1581 aa19.29■□□□□ 0.68
EIF3C-204ENST00000564243 SMARCA2P51531 1590 aa19.28■□□□□ 0.68
EIF3C-204ENST00000564243 BICRAQ9NZM4 1560 aa19.22■□□□□ 0.67
EIF3C-204ENST00000564243 SOGA1O94964 1423 aa19.13■□□□□ 0.65
EIF3C-204ENST00000564243 ZEB1P37275 1124 aaPredicted RBP19.13■□□□□ 0.65
EIF3C-204ENST00000564243 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
EIF3C-204ENST00000564243 CSRNP3Q8WYN3 585 aa19.01■□□□□ 0.63
EIF3C-204ENST00000564243 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
EIF3C-204ENST00000564243 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
EIF3C-204ENST00000564243 CEP162Q5TB80 1403 aa18.98■□□□□ 0.63
EIF3C-204ENST00000564243 UBTFP17480 764 aaKnown RBP18.95■□□□□ 0.62
EIF3C-204ENST00000564243 WRNQ14191 1432 aaPredicted RBP eCLIP18.94■□□□□ 0.62
EIF3C-204ENST00000564243 ATAD2BQ9ULI0 1458 aa18.94■□□□□ 0.62
EIF3C-204ENST00000564243 TNIKQ9UKE5 1360 aa18.94■□□□□ 0.62
EIF3C-204ENST00000564243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
EIF3C-204ENST00000564243 EEA1Q15075 1411 aa18.91■□□□□ 0.62
EIF3C-204ENST00000564243 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
EIF3C-204ENST00000564243 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
EIF3C-204ENST00000564243 CCER1Q8TC90 406 aaPredicted RBP18.83■□□□□ 0.61
EIF3C-204ENST00000564243 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
EIF3C-204ENST00000564243 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
EIF3C-204ENST00000564243 KIF21BO75037 1637 aa18.65■□□□□ 0.58
EIF3C-204ENST00000564243 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
EIF3C-204ENST00000564243 RAPGEF2Q9Y4G8 1499 aa18.64■□□□□ 0.57
EIF3C-204ENST00000564243 CLIP1P30622 1438 aa18.63■□□□□ 0.57
EIF3C-204ENST00000564243 TOP2BQ02880 1626 aa18.58■□□□□ 0.57
EIF3C-204ENST00000564243 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
EIF3C-204ENST00000564243 HNRNPUL2Q1KMD3 747 aaKnown RBP18.53■□□□□ 0.56
EIF3C-204ENST00000564243 VPS8Q8N3P4 1428 aa18.53■□□□□ 0.56
EIF3C-204ENST00000564243 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
EIF3C-204ENST00000564243 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
EIF3C-204ENST00000564243 APLP2Q06481 763 aa18.47■□□□□ 0.55
EIF3C-204ENST00000564243 CUX1P39880 1505 aa18.46■□□□□ 0.55
EIF3C-204ENST00000564243 DIEXFQ68CQ4 756 aaKnown RBP18.44■□□□□ 0.54
EIF3C-204ENST00000564243 PRXQ9BXM0 1461 aa18.43■□□□□ 0.54
EIF3C-204ENST00000564243 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
EIF3C-204ENST00000564243 CFTRP13569 1480 aa18.41■□□□□ 0.54
EIF3C-204ENST00000564243 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
EIF3C-204ENST00000564243 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
EIF3C-204ENST00000564243 ARAP1Q96P48 1450 aa18.34■□□□□ 0.53
EIF3C-204ENST00000564243 KANK4Q5T7N3 995 aaPredicted RBP18.32■□□□□ 0.52
EIF3C-204ENST00000564243 ZNF316A6NFI3 1004 aaPredicted RBP18.3■□□□□ 0.52
EIF3C-204ENST00000564243 NEUROD1Q13562 356 aa18.26■□□□□ 0.51
EIF3C-204ENST00000564243 ACIN1Q9UKV3 1341 aaKnown RBP18.23■□□□□ 0.51
EIF3C-204ENST00000564243 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
EIF3C-204ENST00000564243 IGF1RP08069 1367 aa18.21■□□□□ 0.51
EIF3C-204ENST00000564243 CUX2O14529 1486 aa18.21■□□□□ 0.51
EIF3C-204ENST00000564243 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
EIF3C-204ENST00000564243 PRDM2Q13029 1718 aa18.14■□□□□ 0.49
EIF3C-204ENST00000564243 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
EIF3C-204ENST00000564243 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
EIF3C-204ENST00000564243 CARMIL1Q5VZK9 1371 aa18.11■□□□□ 0.49
EIF3C-204ENST00000564243 DHX57Q6P158 1386 aaKnown RBP18.1■□□□□ 0.49
EIF3C-204ENST00000564243 CENPBP07199 599 aaPredicted RBP18.09■□□□□ 0.49
EIF3C-204ENST00000564243 MIER1Q8N108 512 aa18.09■□□□□ 0.49
EIF3C-204ENST00000564243 RRBP1Q9P2E9 1410 aaKnown RBP18.09■□□□□ 0.49
EIF3C-204ENST00000564243 ITGAEP38570 1179 aa18.07■□□□□ 0.48
EIF3C-204ENST00000564243 GTF3C3Q9Y5Q9 886 aa18.05■□□□□ 0.48
EIF3C-204ENST00000564243 FANCD2Q9BXW9 1451 aa18.05■□□□□ 0.48
EIF3C-204ENST00000564243 YTHDC1Q96MU7 727 aaKnown RBP18.04■□□□□ 0.48
EIF3C-204ENST00000564243 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
EIF3C-204ENST00000564243 P3H3Q8IVL6 736 aa18.03■□□□□ 0.48
EIF3C-204ENST00000564243 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
EIF3C-204ENST00000564243 CLSPNQ9HAW4 1339 aa18■□□□□ 0.47
EIF3C-204ENST00000564243 NESP48681 1621 aa17.99■□□□□ 0.47
EIF3C-204ENST00000564243 TIAM1Q13009 1591 aa17.94■□□□□ 0.46
EIF3C-204ENST00000564243 ATP1B4Q9UN42 357 aaPredicted RBP17.94■□□□□ 0.46
EIF3C-204ENST00000564243 POLA1P09884 1462 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms