RNA–Protein interactions for RNA: ENST00000564161.1

ZC3H18-204, Transcript of zinc finger CCCH-type containing 18, humanhuman

TSL 2

Gene ZC3H18, Length 4,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H18-204ENST00000564161 DCAF8L2P0C7V8 631 aa24.45■■□□□ 1.5
ZC3H18-204ENST00000564161 NISCHQ9Y2I1 1504 aa24.18■■□□□ 1.46
ZC3H18-204ENST00000564161 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
ZC3H18-204ENST00000564161 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
ZC3H18-204ENST00000564161 EHMT2Q96KQ7 1210 aa22.94■■□□□ 1.26
ZC3H18-204ENST00000564161 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
ZC3H18-204ENST00000564161 FAM9AQ8IZU1 332 aaPredicted RBP22.45■■□□□ 1.19
ZC3H18-204ENST00000564161 TTBK1Q5TCY1 1321 aaPredicted RBP22.2■■□□□ 1.14
ZC3H18-204ENST00000564161 APLP2Q06481 763 aa22.04■■□□□ 1.12
ZC3H18-204ENST00000564161 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
ZC3H18-204ENST00000564161 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
ZC3H18-204ENST00000564161 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
ZC3H18-204ENST00000564161 CCER1Q8TC90 406 aaPredicted RBP21.88■■□□□ 1.09
ZC3H18-204ENST00000564161 CENPBP07199 599 aaPredicted RBP21.8■■□□□ 1.08
ZC3H18-204ENST00000564161 HRCP23327 699 aa21.8■■□□□ 1.08
ZC3H18-204ENST00000564161 RANGAP1P46060 587 aaPredicted RBP21.73■■□□□ 1.07
ZC3H18-204ENST00000564161 PPARGC1BQ86YN6 1023 aaKnown RBP21.7■■□□□ 1.06
ZC3H18-204ENST00000564161 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
ZC3H18-204ENST00000564161 LOC105371045A0A1W2PR82 267 aa21.64■■□□□ 1.05
ZC3H18-204ENST00000564161 TRIM26Q12899 539 aaPredicted RBP21.62■■□□□ 1.05
ZC3H18-204ENST00000564161 UBTFP17480 764 aaKnown RBP21.55■■□□□ 1.04
ZC3H18-204ENST00000564161 YTHDC1Q96MU7 727 aaKnown RBP21.52■■□□□ 1.04
ZC3H18-204ENST00000564161 ATP1B4Q9UN42 357 aaPredicted RBP21.28■■□□□ 1
ZC3H18-204ENST00000564161 ERICH6Q7L0X2 663 aa21.17■□□□□ 0.98
ZC3H18-204ENST00000564161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.07■□□□□ 0.96
ZC3H18-204ENST00000564161 NEFLP07196 543 aa21.06■□□□□ 0.96
ZC3H18-204ENST00000564161 MYT1Q01538 1121 aa21.02■□□□□ 0.96
ZC3H18-204ENST00000564161 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
ZC3H18-204ENST00000564161 ITGAEP38570 1179 aa20.94■□□□□ 0.94
ZC3H18-204ENST00000564161 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
ZC3H18-204ENST00000564161 GTF3C3Q9Y5Q9 886 aa20.66■□□□□ 0.9
ZC3H18-204ENST00000564161 POLR3GLQ9BT43 218 aa20.53■□□□□ 0.88
ZC3H18-204ENST00000564161 CNGB1Q14028 1251 aaPredicted RBP20.52■□□□□ 0.88
ZC3H18-204ENST00000564161 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
ZC3H18-204ENST00000564161 ZNF316A6NFI3 1004 aaPredicted RBP20.39■□□□□ 0.85
ZC3H18-204ENST00000564161 BCANQ96GW7 911 aa20.35■□□□□ 0.85
ZC3H18-204ENST00000564161 FAM50AQ14320 339 aaKnown RBP20.34■□□□□ 0.85
ZC3H18-204ENST00000564161 NEUROD1Q13562 356 aa20.32■□□□□ 0.84
ZC3H18-204ENST00000564161 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
ZC3H18-204ENST00000564161 ABCC9O60706 1549 aa20.29■□□□□ 0.84
ZC3H18-204ENST00000564161 DCAF1Q9Y4B6 1507 aa20.23■□□□□ 0.83
ZC3H18-204ENST00000564161 CSRNP3Q8WYN3 585 aa20.2■□□□□ 0.82
ZC3H18-204ENST00000564161 DAXXQ9UER7 740 aaPredicted RBP20.2■□□□□ 0.82
ZC3H18-204ENST00000564161 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
ZC3H18-204ENST00000564161 TRIM52Q96A61 297 aa20.1■□□□□ 0.81
ZC3H18-204ENST00000564161 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
ZC3H18-204ENST00000564161 ANP32CO43423 234 aa20.09■□□□□ 0.81
ZC3H18-204ENST00000564161 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
ZC3H18-204ENST00000564161 MYT1LQ9UL68 1186 aa20.04■□□□□ 0.8
ZC3H18-204ENST00000564161 RTL5Q5HYW3 569 aaPredicted RBP20.01■□□□□ 0.79
ZC3H18-204ENST00000564161 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
ZC3H18-204ENST00000564161 CDK11AQ9UQ88 783 aaPredicted RBP19.94■□□□□ 0.78
ZC3H18-204ENST00000564161 ZNF326Q5BKZ1 582 aaKnown RBP19.92■□□□□ 0.78
ZC3H18-204ENST00000564161 CLSPNQ9HAW4 1339 aa19.87■□□□□ 0.77
ZC3H18-204ENST00000564161 FKBP8Q14318 412 aa19.83■□□□□ 0.77
ZC3H18-204ENST00000564161 MIER1Q8N108 512 aa19.83■□□□□ 0.76
ZC3H18-204ENST00000564161 SLC4A1APQ9BWU0 796 aaKnown RBP19.83■□□□□ 0.76
ZC3H18-204ENST00000564161 SCRIBQ14160 1630 aa19.82■□□□□ 0.76
ZC3H18-204ENST00000564161 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
ZC3H18-204ENST00000564161 ARID3CA6NKF2 412 aa19.75■□□□□ 0.75
ZC3H18-204ENST00000564161 HNRNPUQ00839 825 aaKnown RBP eCLIP19.66■□□□□ 0.74
ZC3H18-204ENST00000564161 TONSLQ96HA7 1378 aa19.61■□□□□ 0.73
ZC3H18-204ENST00000564161 RSF1Q96T23 1441 aaPredicted RBP19.6■□□□□ 0.73
ZC3H18-204ENST00000564161 HIRIP3Q9BW71 556 aaPredicted RBP19.58■□□□□ 0.73
ZC3H18-204ENST00000564161 FBLN2P98095 1184 aa19.57■□□□□ 0.72
ZC3H18-204ENST00000564161 FAM9BQ8IZU0 186 aa19.56■□□□□ 0.72
ZC3H18-204ENST00000564161 ANP32AP39687 249 aaKnown RBP19.54■□□□□ 0.72
ZC3H18-204ENST00000564161 NPM2Q86SE8 214 aaKnown RBP19.54■□□□□ 0.72
ZC3H18-204ENST00000564161 CLIP1P30622 1438 aa19.52■□□□□ 0.71
ZC3H18-204ENST00000564161 ZNF777Q9ULD5 760 aaPredicted RBP19.51■□□□□ 0.71
ZC3H18-204ENST00000564161 CEP162Q5TB80 1403 aa19.5■□□□□ 0.71
ZC3H18-204ENST00000564161 CCDC180Q9P1Z9 1646 aa19.49■□□□□ 0.71
ZC3H18-204ENST00000564161 IRX6P78412 446 aaPredicted RBP19.46■□□□□ 0.71
ZC3H18-204ENST00000564161 CHIC2Q9UKJ5 165 aa19.46■□□□□ 0.71
ZC3H18-204ENST00000564161 SALL2Q9Y467 1007 aaPredicted RBP19.42■□□□□ 0.7
ZC3H18-204ENST00000564161 CANXP27824 592 aaKnown RBP19.4■□□□□ 0.7
ZC3H18-204ENST00000564161 BCL11AQ9H165 835 aa19.37■□□□□ 0.69
ZC3H18-204ENST00000564161 MRS2Q9HD23 443 aa19.36■□□□□ 0.69
ZC3H18-204ENST00000564161 CCDC136Q96JN2 1154 aa19.34■□□□□ 0.69
ZC3H18-204ENST00000564161 NBR1Q14596 966 aa19.33■□□□□ 0.68
ZC3H18-204ENST00000564161 GOLGA3Q08378 1498 aa19.31■□□□□ 0.68
ZC3H18-204ENST00000564161 TNIKQ9UKE5 1360 aa19.31■□□□□ 0.68
ZC3H18-204ENST00000564161 TMC1Q8TDI8 760 aa19.3■□□□□ 0.68
ZC3H18-204ENST00000564161 EEA1Q15075 1411 aa19.29■□□□□ 0.68
ZC3H18-204ENST00000564161 MTUS2Q5JR59 1369 aa19.25■□□□□ 0.67
ZC3H18-204ENST00000564161 ZBTB47Q9UFB7 747 aaPredicted RBP19.22■□□□□ 0.67
ZC3H18-204ENST00000564161 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
ZC3H18-204ENST00000564161 RRP7BPQ9NSQ0 103 aa19.22■□□□□ 0.67
ZC3H18-204ENST00000564161 EIF4G2P78344 907 aaKnown RBP eCLIP19.21■□□□□ 0.67
ZC3H18-204ENST00000564161 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
ZC3H18-204ENST00000564161 SIN3AQ96ST3 1273 aa19.19■□□□□ 0.66
ZC3H18-204ENST00000564161 KDM2AQ9Y2K7 1162 aa19.19■□□□□ 0.66
ZC3H18-204ENST00000564161 SUPT16HQ9Y5B9 1047 aaKnown RBP19.18■□□□□ 0.66
ZC3H18-204ENST00000564161 EIF5BO60841 1220 aaKnown RBP19.18■□□□□ 0.66
ZC3H18-204ENST00000564161 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
ZC3H18-204ENST00000564161 CECR2Q9BXF3 1484 aa19.14■□□□□ 0.65
ZC3H18-204ENST00000564161 SOGA1O94964 1423 aa19.12■□□□□ 0.65
ZC3H18-204ENST00000564161 RB1CC1Q8TDY2 1594 aa19.12■□□□□ 0.65
ZC3H18-204ENST00000564161 CEP164Q9UPV0 1460 aa19.11■□□□□ 0.65
ZC3H18-204ENST00000564161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms