RNA–Protein interactions for RNA: ENST00000564145.1

HERC2P4-202, Transcript of hect domain and RLD 2 pseudogene 4, humanhuman

TSL 3 BASIC

Gene HERC2P4, Length 683 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P4-202ENST00000564145 AEBP2Q6ZN18 517 aaPredicted RBP33.35■■■□□ 2.93
HERC2P4-202ENST00000564145 CHIC1Q5VXU3 224 aa32.57■■■□□ 2.8
HERC2P4-202ENST00000564145 PHF23Q9BUL5 403 aaPredicted RBP28.54■■■□□ 2.16
HERC2P4-202ENST00000564145 SENP3Q9H4L4 574 aaPredicted RBP28.5■■■□□ 2.15
HERC2P4-202ENST00000564145 PLPPR3Q6T4P5 718 aa26.47■■□□□ 1.83
HERC2P4-202ENST00000564145 FOXD1Q16676 465 aa26.35■■□□□ 1.81
HERC2P4-202ENST00000564145 ADRA2BP18089 450 aa25.24■■□□□ 1.63
HERC2P4-202ENST00000564145 PPP6R1Q9UPN7 881 aa25.23■■□□□ 1.63
HERC2P4-202ENST00000564145 PIAS4Q8N2W9 510 aaPredicted RBP24.89■■□□□ 1.58
HERC2P4-202ENST00000564145 MSH5O43196 834 aa24.49■■□□□ 1.51
HERC2P4-202ENST00000564145 NISCHQ9Y2I1 1504 aa24.02■■□□□ 1.44
HERC2P4-202ENST00000564145 SCAF1Q9H7N4 1312 aaKnown RBP23.31■■□□□ 1.32
HERC2P4-202ENST00000564145 PPP4R3CPQ6ZMV5 832 aa23.26■■□□□ 1.31
HERC2P4-202ENST00000564145 MAPK8IP2Q13387 824 aaPredicted RBP22.91■■□□□ 1.26
HERC2P4-202ENST00000564145 NCBP3Q53F19 620 aaKnown RBP22.75■■□□□ 1.23
HERC2P4-202ENST00000564145 CNKSR2Q8WXI2 1034 aa22.68■■□□□ 1.22
HERC2P4-202ENST00000564145 DMRT2Q9Y5R5 561 aa22.67■■□□□ 1.22
HERC2P4-202ENST00000564145 KCNA4P22459 653 aa22.51■■□□□ 1.19
HERC2P4-202ENST00000564145 POTEDQ86YR6 584 aa22.4■■□□□ 1.18
HERC2P4-202ENST00000564145 RNF216Q9NWF9 866 aaPredicted RBP22.25■■□□□ 1.15
HERC2P4-202ENST00000564145 NPM3O75607 178 aaKnown RBP22.24■■□□□ 1.15
HERC2P4-202ENST00000564145 HOXD11P31277 338 aaPredicted RBP22.16■■□□□ 1.14
HERC2P4-202ENST00000564145 DCAF8L1A6NGE4 600 aa21.78■■□□□ 1.08
HERC2P4-202ENST00000564145 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
HERC2P4-202ENST00000564145 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
HERC2P4-202ENST00000564145 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
HERC2P4-202ENST00000564145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.21■□□□□ 0.99
HERC2P4-202ENST00000564145 ABCC9O60706 1549 aa21.09■□□□□ 0.97
HERC2P4-202ENST00000564145 SLC4A2P04920 1241 aa20.99■□□□□ 0.95
HERC2P4-202ENST00000564145 RNF39Q9H2S5 420 aa20.88■□□□□ 0.93
HERC2P4-202ENST00000564145 FOXD4L1Q9NU39 408 aa20.83■□□□□ 0.93
HERC2P4-202ENST00000564145 C1QBPQ07021 282 aaKnown RBP20.72■□□□□ 0.91
HERC2P4-202ENST00000564145 U3KPZ7 1027 aaPredicted RBP20.71■□□□□ 0.91
HERC2P4-202ENST00000564145 EHMT2Q96KQ7 1210 aa20.69■□□□□ 0.9
HERC2P4-202ENST00000564145 ZBTB22O15209 634 aa20.63■□□□□ 0.89
HERC2P4-202ENST00000564145 MYCNP04198 464 aaPredicted RBP20.63■□□□□ 0.89
HERC2P4-202ENST00000564145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.62■□□□□ 0.89
HERC2P4-202ENST00000564145 HNRNPUL2Q1KMD3 747 aaKnown RBP20.62■□□□□ 0.89
HERC2P4-202ENST00000564145 CACNB1Q02641 598 aaPredicted RBP20.51■□□□□ 0.87
HERC2P4-202ENST00000564145 SAMD1Q6SPF0 538 aaPredicted RBP20.49■□□□□ 0.87
HERC2P4-202ENST00000564145 CSRNP3Q8WYN3 585 aa20.49■□□□□ 0.87
HERC2P4-202ENST00000564145 APLP2Q06481 763 aa20.48■□□□□ 0.87
HERC2P4-202ENST00000564145 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
HERC2P4-202ENST00000564145 CAPN15O75808 1086 aa20.21■□□□□ 0.83
HERC2P4-202ENST00000564145 ATXN8OSP0DMR3 200 aa20.19■□□□□ 0.82
HERC2P4-202ENST00000564145 SPINK5Q9NQ38 1064 aaPredicted RBP20.17■□□□□ 0.82
HERC2P4-202ENST00000564145 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
HERC2P4-202ENST00000564145 ZNF219Q9P2Y4 722 aaPredicted RBP20.11■□□□□ 0.81
HERC2P4-202ENST00000564145 NACADO15069 1562 aa20.11■□□□□ 0.81
HERC2P4-202ENST00000564145 TRHP20396 242 aaPredicted RBP20.07■□□□□ 0.8
HERC2P4-202ENST00000564145 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
HERC2P4-202ENST00000564145 ATF5Q9Y2D1 282 aaPredicted RBP19.94■□□□□ 0.78
HERC2P4-202ENST00000564145 MYO15BQ96JP2 1530 aa19.93■□□□□ 0.78
HERC2P4-202ENST00000564145 DSG3P32926 999 aa19.82■□□□□ 0.76
HERC2P4-202ENST00000564145 PABPN1Q86U42 306 aaKnown RBP eCLIP19.82■□□□□ 0.76
HERC2P4-202ENST00000564145 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
HERC2P4-202ENST00000564145 ABCB7O75027 752 aa19.73■□□□□ 0.75
HERC2P4-202ENST00000564145 POLA2Q14181 598 aa19.7■□□□□ 0.74
HERC2P4-202ENST00000564145 SCRIBQ14160 1630 aa19.49■□□□□ 0.71
HERC2P4-202ENST00000564145 ZBTB12Q9Y330 459 aaPredicted RBP19.47■□□□□ 0.71
HERC2P4-202ENST00000564145 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
HERC2P4-202ENST00000564145 UNC13AQ9UPW8 1703 aa19.46■□□□□ 0.71
HERC2P4-202ENST00000564145 FBLN2P98095 1184 aa19.33■□□□□ 0.68
HERC2P4-202ENST00000564145 SHROOM4Q9ULL8 1493 aa19.29■□□□□ 0.68
HERC2P4-202ENST00000564145 MKRN4PQ13434 485 aaPredicted RBP19.08■□□□□ 0.64
HERC2P4-202ENST00000564145 RBM42Q9BTD8 480 aaKnown RBP19.03■□□□□ 0.64
HERC2P4-202ENST00000564145 EIF4G1Q04637 1599 aaKnown RBP19.02■□□□□ 0.63
HERC2P4-202ENST00000564145 OSCARQ8IYS5 282 aa18.97■□□□□ 0.63
HERC2P4-202ENST00000564145 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
HERC2P4-202ENST00000564145 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
HERC2P4-202ENST00000564145 SPDYE2BA6NHP3 402 aa18.88■□□□□ 0.61
HERC2P4-202ENST00000564145 SPDYE6P0CI01 402 aa18.88■□□□□ 0.61
HERC2P4-202ENST00000564145 SPDYE2Q495Y8 402 aa18.88■□□□□ 0.61
HERC2P4-202ENST00000564145 ZNF692Q9BU19 519 aaPredicted RBP18.8■□□□□ 0.6
HERC2P4-202ENST00000564145 AKT1S1Q96B36 256 aa18.73■□□□□ 0.59
HERC2P4-202ENST00000564145 SPDYE4A6NLX3 237 aa18.72■□□□□ 0.59
HERC2P4-202ENST00000564145 SSUH2Q9Y2M2 353 aa18.64■□□□□ 0.57
HERC2P4-202ENST00000564145 NCAPD3P42695 1498 aa18.62■□□□□ 0.57
HERC2P4-202ENST00000564145 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
HERC2P4-202ENST00000564145 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
HERC2P4-202ENST00000564145 FKBP8Q14318 412 aa18.59■□□□□ 0.57
HERC2P4-202ENST00000564145 SMARCA4P51532 1647 aa18.59■□□□□ 0.57
HERC2P4-202ENST00000564145 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
HERC2P4-202ENST00000564145 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
HERC2P4-202ENST00000564145 REM2Q8IYK8 340 aaPredicted RBP18.49■□□□□ 0.55
HERC2P4-202ENST00000564145 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
HERC2P4-202ENST00000564145 HMGXB3Q12766 1538 aa18.41■□□□□ 0.54
HERC2P4-202ENST00000564145 SPDYE1Q8NFV5 336 aaPredicted RBP18.37■□□□□ 0.53
HERC2P4-202ENST00000564145 PEG3Q9GZU2 1588 aa18.37■□□□□ 0.53
HERC2P4-202ENST00000564145 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
HERC2P4-202ENST00000564145 PROM2Q8N271 834 aa18.31■□□□□ 0.52
HERC2P4-202ENST00000564145 STAG3Q9UJ98 1225 aa18.29■□□□□ 0.52
HERC2P4-202ENST00000564145 CLEC11AQ9Y240 323 aa18.27■□□□□ 0.52
HERC2P4-202ENST00000564145 WIZO95785 1651 aa18.25■□□□□ 0.51
HERC2P4-202ENST00000564145 PITPNM1O00562 1244 aa18.24■□□□□ 0.51
HERC2P4-202ENST00000564145 ERCC6Q03468 1493 aa18.23■□□□□ 0.51
HERC2P4-202ENST00000564145 CHRDL2Q6WN34 429 aa18.2■□□□□ 0.5
HERC2P4-202ENST00000564145 NESP48681 1621 aa18.18■□□□□ 0.5
HERC2P4-202ENST00000564145 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
HERC2P4-202ENST00000564145 PRR29P0C7W0 189 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms