RNA–Protein interactions for RNA: ENST00000563332.6

CDIP1-205, Transcript of cell death inducing p53 target 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDIP1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-205ENST00000563332 NISCHQ9Y2I1 1504 aa30.91■■■□□ 2.54
CDIP1-205ENST00000563332 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
CDIP1-205ENST00000563332 CCDC180Q9P1Z9 1646 aa26.31■■□□□ 1.8
CDIP1-205ENST00000563332 DCAF8L2P0C7V8 631 aa26.13■■□□□ 1.77
CDIP1-205ENST00000563332 ZCCHC6Q5VYS8 1495 aaKnown RBP26.05■■□□□ 1.76
CDIP1-205ENST00000563332 SUPT5HO00267 1087 aaKnown RBP25.73■■□□□ 1.71
CDIP1-205ENST00000563332 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
CDIP1-205ENST00000563332 ABCC9O60706 1549 aa25.05■■□□□ 1.6
CDIP1-205ENST00000563332 SCRIBQ14160 1630 aa24.89■■□□□ 1.58
CDIP1-205ENST00000563332 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
CDIP1-205ENST00000563332 MYO15BQ96JP2 1530 aa24.55■■□□□ 1.52
CDIP1-205ENST00000563332 NACADO15069 1562 aa24.46■■□□□ 1.51
CDIP1-205ENST00000563332 RSF1Q96T23 1441 aaPredicted RBP24.38■■□□□ 1.49
CDIP1-205ENST00000563332 CECR2Q9BXF3 1484 aa24.29■■□□□ 1.48
CDIP1-205ENST00000563332 RB1CC1Q8TDY2 1594 aa24.19■■□□□ 1.46
CDIP1-205ENST00000563332 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
CDIP1-205ENST00000563332 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
CDIP1-205ENST00000563332 WIZO95785 1651 aa23.99■■□□□ 1.43
CDIP1-205ENST00000563332 PABPN1Q86U42 306 aaKnown RBP eCLIP23.98■■□□□ 1.43
CDIP1-205ENST00000563332 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
CDIP1-205ENST00000563332 FAM9AQ8IZU1 332 aaPredicted RBP23.86■■□□□ 1.41
CDIP1-205ENST00000563332 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
CDIP1-205ENST00000563332 EHMT2Q96KQ7 1210 aa23.84■■□□□ 1.41
CDIP1-205ENST00000563332 BAZ1AQ9NRL2 1556 aaPredicted RBP23.73■■□□□ 1.39
CDIP1-205ENST00000563332 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
CDIP1-205ENST00000563332 SMARCA4P51532 1647 aa23.63■■□□□ 1.37
CDIP1-205ENST00000563332 BICRAQ9NZM4 1560 aa23.62■■□□□ 1.37
CDIP1-205ENST00000563332 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
CDIP1-205ENST00000563332 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
CDIP1-205ENST00000563332 SMARCA2P51531 1590 aa23.38■■□□□ 1.33
CDIP1-205ENST00000563332 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
CDIP1-205ENST00000563332 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
CDIP1-205ENST00000563332 HRCP23327 699 aa23.2■■□□□ 1.3
CDIP1-205ENST00000563332 PPARGC1BQ86YN6 1023 aaKnown RBP23.18■■□□□ 1.3
CDIP1-205ENST00000563332 ATAD2BQ9ULI0 1458 aa23.14■■□□□ 1.29
CDIP1-205ENST00000563332 BAZ1BQ9UIG0 1483 aaKnown RBP23.08■■□□□ 1.29
CDIP1-205ENST00000563332 TRIM26Q12899 539 aaPredicted RBP23.08■■□□□ 1.29
CDIP1-205ENST00000563332 SOGA1O94964 1423 aa23.07■■□□□ 1.28
CDIP1-205ENST00000563332 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
CDIP1-205ENST00000563332 RUSC2Q8N2Y8 1516 aa23.02■■□□□ 1.28
CDIP1-205ENST00000563332 TTBK1Q5TCY1 1321 aaPredicted RBP22.92■■□□□ 1.26
CDIP1-205ENST00000563332 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
CDIP1-205ENST00000563332 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
CDIP1-205ENST00000563332 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
CDIP1-205ENST00000563332 CSRNP3Q8WYN3 585 aa22.83■■□□□ 1.25
CDIP1-205ENST00000563332 RANGAP1P46060 587 aaPredicted RBP22.72■■□□□ 1.23
CDIP1-205ENST00000563332 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
CDIP1-205ENST00000563332 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
CDIP1-205ENST00000563332 TNIKQ9UKE5 1360 aa22.61■■□□□ 1.21
CDIP1-205ENST00000563332 EEA1Q15075 1411 aa22.6■■□□□ 1.21
CDIP1-205ENST00000563332 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
CDIP1-205ENST00000563332 GOLGA3Q08378 1498 aa22.57■■□□□ 1.2
CDIP1-205ENST00000563332 RAPGEF2Q9Y4G8 1499 aa22.49■■□□□ 1.19
CDIP1-205ENST00000563332 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
CDIP1-205ENST00000563332 CEP164Q9UPV0 1460 aa22.46■■□□□ 1.19
CDIP1-205ENST00000563332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.46■■□□□ 1.19
CDIP1-205ENST00000563332 CUX1P39880 1505 aa22.46■■□□□ 1.19
CDIP1-205ENST00000563332 CC2D2AQ9P2K1 1620 aa22.43■■□□□ 1.18
CDIP1-205ENST00000563332 CFTRP13569 1480 aa22.42■■□□□ 1.18
CDIP1-205ENST00000563332 KIF21BO75037 1637 aa22.38■■□□□ 1.17
CDIP1-205ENST00000563332 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
CDIP1-205ENST00000563332 CLIP1P30622 1438 aa22.37■■□□□ 1.17
CDIP1-205ENST00000563332 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
CDIP1-205ENST00000563332 CCER1Q8TC90 406 aaPredicted RBP22.28■■□□□ 1.16
CDIP1-205ENST00000563332 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
CDIP1-205ENST00000563332 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
CDIP1-205ENST00000563332 NESP48681 1621 aa22.22■■□□□ 1.15
CDIP1-205ENST00000563332 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
CDIP1-205ENST00000563332 PRXQ9BXM0 1461 aa22.19■■□□□ 1.14
CDIP1-205ENST00000563332 HNRNPUL2Q1KMD3 747 aaKnown RBP22.17■■□□□ 1.14
CDIP1-205ENST00000563332 CUX2O14529 1486 aa22.17■■□□□ 1.14
CDIP1-205ENST00000563332 VPS8Q8N3P4 1428 aa22.16■■□□□ 1.14
CDIP1-205ENST00000563332 APLP2Q06481 763 aa22.13■■□□□ 1.13
CDIP1-205ENST00000563332 FGD5Q6ZNL6 1462 aa22.13■■□□□ 1.13
CDIP1-205ENST00000563332 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
CDIP1-205ENST00000563332 FANCD2Q9BXW9 1451 aa22.11■■□□□ 1.13
CDIP1-205ENST00000563332 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
CDIP1-205ENST00000563332 IGF1RP08069 1367 aa22.05■■□□□ 1.12
CDIP1-205ENST00000563332 ARAP1Q96P48 1450 aa22.05■■□□□ 1.12
CDIP1-205ENST00000563332 RAD54L2Q9Y4B4 1467 aa22.04■■□□□ 1.12
CDIP1-205ENST00000563332 KANK4Q5T7N3 995 aaPredicted RBP22.01■■□□□ 1.11
CDIP1-205ENST00000563332 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
CDIP1-205ENST00000563332 CARMIL1Q5VZK9 1371 aa21.95■■□□□ 1.11
CDIP1-205ENST00000563332 ARHGAP35Q9NRY4 1499 aa21.92■■□□□ 1.1
CDIP1-205ENST00000563332 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
CDIP1-205ENST00000563332 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
CDIP1-205ENST00000563332 DNMBPQ6XZF7 1577 aa21.86■■□□□ 1.09
CDIP1-205ENST00000563332 URB2Q14146 1524 aaKnown RBP21.84■■□□□ 1.09
CDIP1-205ENST00000563332 ATP1B4Q9UN42 357 aaPredicted RBP21.84■■□□□ 1.09
CDIP1-205ENST00000563332 TDRD9Q8NDG6 1382 aaKnown RBP21.82■■□□□ 1.08
CDIP1-205ENST00000563332 ITGAEP38570 1179 aa21.81■■□□□ 1.08
CDIP1-205ENST00000563332 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
CDIP1-205ENST00000563332 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
CDIP1-205ENST00000563332 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
CDIP1-205ENST00000563332 FHOD3Q2V2M9 1422 aa21.69■■□□□ 1.06
CDIP1-205ENST00000563332 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
CDIP1-205ENST00000563332 GAPVD1Q14C86 1478 aa21.59■■□□□ 1.05
CDIP1-205ENST00000563332 DIEXFQ68CQ4 756 aaKnown RBP21.57■■□□□ 1.04
CDIP1-205ENST00000563332 PCF11O94913 1555 aaKnown RBP21.57■■□□□ 1.04
CDIP1-205ENST00000563332 CCNB3Q8WWL7 1395 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms