RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
HDGFL3-202ENST00000562702 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.37
HDGFL3-202ENST00000562702 SENP3Q9H4L4 574 aaPredicted RBP21.5■■□□□ 1.03
HDGFL3-202ENST00000562702 PHF23Q9BUL5 403 aaPredicted RBP21.12■□□□□ 0.97
HDGFL3-202ENST00000562702 FOXD1Q16676 465 aa19.93■□□□□ 0.78
HDGFL3-202ENST00000562702 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
HDGFL3-202ENST00000562702 MSH5O43196 834 aa18.87■□□□□ 0.61
HDGFL3-202ENST00000562702 PIAS4Q8N2W9 510 aaPredicted RBP18.68■□□□□ 0.58
HDGFL3-202ENST00000562702 POTEDQ86YR6 584 aa18.58■□□□□ 0.56
HDGFL3-202ENST00000562702 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
HDGFL3-202ENST00000562702 ADRA2BP18089 450 aa18.43■□□□□ 0.54
HDGFL3-202ENST00000562702 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
HDGFL3-202ENST00000562702 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
HDGFL3-202ENST00000562702 MAPK8IP2Q13387 824 aaPredicted RBP16.94■□□□□ 0.3
HDGFL3-202ENST00000562702 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
HDGFL3-202ENST00000562702 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
HDGFL3-202ENST00000562702 CACNB1Q02641 598 aaPredicted RBP16.28■□□□□ 0.2
HDGFL3-202ENST00000562702 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
HDGFL3-202ENST00000562702 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
HDGFL3-202ENST00000562702 RNF216Q9NWF9 866 aaPredicted RBP16.14■□□□□ 0.17
HDGFL3-202ENST00000562702 RNF39Q9H2S5 420 aa15.99■□□□□ 0.15
HDGFL3-202ENST00000562702 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
HDGFL3-202ENST00000562702 C1QBPQ07021 282 aaKnown RBP15.83■□□□□ 0.12
HDGFL3-202ENST00000562702 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
HDGFL3-202ENST00000562702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
HDGFL3-202ENST00000562702 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
HDGFL3-202ENST00000562702 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
HDGFL3-202ENST00000562702 KCNA4P22459 653 aa15.06■□□□□ 0
HDGFL3-202ENST00000562702 CAPN15O75808 1086 aa15.04■□□□□ -0
HDGFL3-202ENST00000562702 SPINK5Q9NQ38 1064 aaPredicted RBP14.94□□□□□ -0.02
HDGFL3-202ENST00000562702 APLP2Q06481 763 aa14.93□□□□□ -0.02
HDGFL3-202ENST00000562702 DSG3P32926 999 aa14.91□□□□□ -0.02
HDGFL3-202ENST00000562702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
HDGFL3-202ENST00000562702 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
HDGFL3-202ENST00000562702 SLC4A2P04920 1241 aa14.82□□□□□ -0.04
HDGFL3-202ENST00000562702 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.05
HDGFL3-202ENST00000562702 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
HDGFL3-202ENST00000562702 SAMD1Q6SPF0 538 aaPredicted RBP14.7□□□□□ -0.06
HDGFL3-202ENST00000562702 ABCB7O75027 752 aa14.61□□□□□ -0.07
HDGFL3-202ENST00000562702 POTEHQ6S545 545 aa14.57□□□□□ -0.08
HDGFL3-202ENST00000562702 MYCNP04198 464 aaPredicted RBP14.46□□□□□ -0.09
HDGFL3-202ENST00000562702 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
HDGFL3-202ENST00000562702 POLA2Q14181 598 aa14.28□□□□□ -0.12
HDGFL3-202ENST00000562702 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.13
HDGFL3-202ENST00000562702 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
HDGFL3-202ENST00000562702 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
HDGFL3-202ENST00000562702 CHRDL2Q6WN34 429 aa14.04□□□□□ -0.16
HDGFL3-202ENST00000562702 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
HDGFL3-202ENST00000562702 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
HDGFL3-202ENST00000562702 ATXN8OSP0DMR3 200 aa13.81□□□□□ -0.2
HDGFL3-202ENST00000562702 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
HDGFL3-202ENST00000562702 REM2Q8IYK8 340 aaPredicted RBP13.77□□□□□ -0.21
HDGFL3-202ENST00000562702 ZBTB22O15209 634 aa13.76□□□□□ -0.21
HDGFL3-202ENST00000562702 FBLN2P98095 1184 aa13.68□□□□□ -0.22
HDGFL3-202ENST00000562702 PIP4P2Q8N4L2 257 aa13.62□□□□□ -0.23
HDGFL3-202ENST00000562702 PITPNM1O00562 1244 aa13.6□□□□□ -0.23
HDGFL3-202ENST00000562702 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
HDGFL3-202ENST00000562702 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
HDGFL3-202ENST00000562702 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
HDGFL3-202ENST00000562702 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
HDGFL3-202ENST00000562702 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.25
HDGFL3-202ENST00000562702 HAX1O00165 279 aa13.51□□□□□ -0.25
HDGFL3-202ENST00000562702 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
HDGFL3-202ENST00000562702 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
HDGFL3-202ENST00000562702 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
HDGFL3-202ENST00000562702 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
HDGFL3-202ENST00000562702 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
HDGFL3-202ENST00000562702 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
HDGFL3-202ENST00000562702 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
HDGFL3-202ENST00000562702 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
HDGFL3-202ENST00000562702 EVX2Q03828 476 aa13.14□□□□□ -0.31
HDGFL3-202ENST00000562702 C19orf67A6NJJ6 358 aa13.09□□□□□ -0.31
HDGFL3-202ENST00000562702 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
HDGFL3-202ENST00000562702 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
HDGFL3-202ENST00000562702 GABBR2O75899 941 aa12.95□□□□□ -0.34
HDGFL3-202ENST00000562702 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
HDGFL3-202ENST00000562702 STAG3Q9UJ98 1225 aa12.88□□□□□ -0.35
HDGFL3-202ENST00000562702 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
HDGFL3-202ENST00000562702 CLCN6P51797 869 aa12.86□□□□□ -0.35
HDGFL3-202ENST00000562702 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
HDGFL3-202ENST00000562702 LHX8Q68G74 356 aa12.76□□□□□ -0.37
HDGFL3-202ENST00000562702 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
HDGFL3-202ENST00000562702 DCBLD2Q96PD2 775 aa12.68□□□□□ -0.38
HDGFL3-202ENST00000562702 ZRANB1Q9UGI0 708 aa12.68□□□□□ -0.38
HDGFL3-202ENST00000562702 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
HDGFL3-202ENST00000562702 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
HDGFL3-202ENST00000562702 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
HDGFL3-202ENST00000562702 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
HDGFL3-202ENST00000562702 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
HDGFL3-202ENST00000562702 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
HDGFL3-202ENST00000562702 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
HDGFL3-202ENST00000562702 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
HDGFL3-202ENST00000562702 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
HDGFL3-202ENST00000562702 PROM2Q8N271 834 aa12.32□□□□□ -0.44
HDGFL3-202ENST00000562702 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
HDGFL3-202ENST00000562702 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
HDGFL3-202ENST00000562702 MIER1Q8N108 512 aa12.23□□□□□ -0.45
HDGFL3-202ENST00000562702 SLC39A7Q92504 469 aa12.23□□□□□ -0.45
HDGFL3-202ENST00000562702 ASTLQ6HA08 431 aaPredicted RBP12.22□□□□□ -0.45
HDGFL3-202ENST00000562702 C7P10643 843 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms