RNA–Protein interactions for RNA: ENST00000562300.5

AC090518.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC090518.1, Length 1,495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090518.1-201ENST00000562300 AEBP2Q6ZN18 517 aaPredicted RBP29.63■■■□□ 2.33
AC090518.1-201ENST00000562300 CHIC1Q5VXU3 224 aa29.04■■■□□ 2.24
AC090518.1-201ENST00000562300 PHF23Q9BUL5 403 aaPredicted RBP25.59■■□□□ 1.69
AC090518.1-201ENST00000562300 SENP3Q9H4L4 574 aaPredicted RBP25.06■■□□□ 1.6
AC090518.1-201ENST00000562300 PLPPR3Q6T4P5 718 aa23.62■■□□□ 1.37
AC090518.1-201ENST00000562300 FOXD1Q16676 465 aa23.29■■□□□ 1.32
AC090518.1-201ENST00000562300 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
AC090518.1-201ENST00000562300 ADRA2BP18089 450 aa22.53■■□□□ 1.2
AC090518.1-201ENST00000562300 PIAS4Q8N2W9 510 aaPredicted RBP21.97■■□□□ 1.11
AC090518.1-201ENST00000562300 MSH5O43196 834 aa21.37■■□□□ 1.01
AC090518.1-201ENST00000562300 PPP4R3CPQ6ZMV5 832 aa20.85■□□□□ 0.93
AC090518.1-201ENST00000562300 KCNA4P22459 653 aa20.56■□□□□ 0.88
AC090518.1-201ENST00000562300 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
AC090518.1-201ENST00000562300 MAPK8IP2Q13387 824 aaPredicted RBP20.41■□□□□ 0.86
AC090518.1-201ENST00000562300 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
AC090518.1-201ENST00000562300 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
AC090518.1-201ENST00000562300 NPM3O75607 178 aaKnown RBP20.06■□□□□ 0.8
AC090518.1-201ENST00000562300 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
AC090518.1-201ENST00000562300 RNF216Q9NWF9 866 aaPredicted RBP19.79■□□□□ 0.76
AC090518.1-201ENST00000562300 HOXD11P31277 338 aaPredicted RBP19.68■□□□□ 0.74
AC090518.1-201ENST00000562300 SLC4A1APQ9BWU0 796 aaKnown RBP19.57■□□□□ 0.72
AC090518.1-201ENST00000562300 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
AC090518.1-201ENST00000562300 POTEDQ86YR6 584 aa19.25■□□□□ 0.67
AC090518.1-201ENST00000562300 EHMT2Q96KQ7 1210 aa19.21■□□□□ 0.67
AC090518.1-201ENST00000562300 DCAF8L1A6NGE4 600 aa19.18■□□□□ 0.66
AC090518.1-201ENST00000562300 ZBTB22O15209 634 aa18.94■□□□□ 0.62
AC090518.1-201ENST00000562300 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
AC090518.1-201ENST00000562300 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
AC090518.1-201ENST00000562300 FOXD4L1Q9NU39 408 aa18.84■□□□□ 0.61
AC090518.1-201ENST00000562300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.59
AC090518.1-201ENST00000562300 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
AC090518.1-201ENST00000562300 U3KPZ7 1027 aaPredicted RBP18.49■□□□□ 0.55
AC090518.1-201ENST00000562300 RNF39Q9H2S5 420 aa18.36■□□□□ 0.53
AC090518.1-201ENST00000562300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
AC090518.1-201ENST00000562300 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
AC090518.1-201ENST00000562300 SAMD1Q6SPF0 538 aaPredicted RBP18.2■□□□□ 0.5
AC090518.1-201ENST00000562300 ATXN8OSP0DMR3 200 aa18.15■□□□□ 0.5
AC090518.1-201ENST00000562300 C1QBPQ07021 282 aaKnown RBP18.12■□□□□ 0.49
AC090518.1-201ENST00000562300 ATF5Q9Y2D1 282 aaPredicted RBP18.06■□□□□ 0.48
AC090518.1-201ENST00000562300 APLP2Q06481 763 aa18■□□□□ 0.47
AC090518.1-201ENST00000562300 SPINK5Q9NQ38 1064 aaPredicted RBP17.95■□□□□ 0.46
AC090518.1-201ENST00000562300 CAPN15O75808 1086 aa17.84■□□□□ 0.45
AC090518.1-201ENST00000562300 TRHP20396 242 aaPredicted RBP17.8■□□□□ 0.44
AC090518.1-201ENST00000562300 CACNB1Q02641 598 aaPredicted RBP17.77■□□□□ 0.44
AC090518.1-201ENST00000562300 ZNF219Q9P2Y4 722 aaPredicted RBP17.76■□□□□ 0.43
AC090518.1-201ENST00000562300 POLA2Q14181 598 aa17.55■□□□□ 0.4
AC090518.1-201ENST00000562300 ABCB7O75027 752 aa17.53■□□□□ 0.4
AC090518.1-201ENST00000562300 DSG3P32926 999 aa17.52■□□□□ 0.4
AC090518.1-201ENST00000562300 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
AC090518.1-201ENST00000562300 FBLN2P98095 1184 aa17.22■□□□□ 0.35
AC090518.1-201ENST00000562300 ZBTB12Q9Y330 459 aaPredicted RBP17.21■□□□□ 0.35
AC090518.1-201ENST00000562300 FKBP8Q14318 412 aa17.09■□□□□ 0.33
AC090518.1-201ENST00000562300 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
AC090518.1-201ENST00000562300 SPDYE4A6NLX3 237 aa16.93■□□□□ 0.3
AC090518.1-201ENST00000562300 SPDYE2BA6NHP3 402 aa16.78■□□□□ 0.28
AC090518.1-201ENST00000562300 SPDYE6P0CI01 402 aa16.78■□□□□ 0.28
AC090518.1-201ENST00000562300 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
AC090518.1-201ENST00000562300 ZNF692Q9BU19 519 aaPredicted RBP16.76■□□□□ 0.27
AC090518.1-201ENST00000562300 SSUH2Q9Y2M2 353 aa16.69■□□□□ 0.26
AC090518.1-201ENST00000562300 PROM2Q8N271 834 aa16.67■□□□□ 0.26
AC090518.1-201ENST00000562300 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
AC090518.1-201ENST00000562300 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
AC090518.1-201ENST00000562300 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
AC090518.1-201ENST00000562300 FBXO3Q9UK99 471 aa16.39■□□□□ 0.21
AC090518.1-201ENST00000562300 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
AC090518.1-201ENST00000562300 STAG3Q9UJ98 1225 aa16.26■□□□□ 0.19
AC090518.1-201ENST00000562300 SPDYE1Q8NFV5 336 aaPredicted RBP16.25■□□□□ 0.19
AC090518.1-201ENST00000562300 VASPP50552 380 aaPredicted RBP16.2■□□□□ 0.18
AC090518.1-201ENST00000562300 CLEC11AQ9Y240 323 aa16.2■□□□□ 0.18
AC090518.1-201ENST00000562300 PITPNM1O00562 1244 aa16.17■□□□□ 0.18
AC090518.1-201ENST00000562300 PRR29P0C7W0 189 aa16.06■□□□□ 0.16
AC090518.1-201ENST00000562300 MIER1Q8N108 512 aa16.03■□□□□ 0.16
AC090518.1-201ENST00000562300 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.15
AC090518.1-201ENST00000562300 PLCD3Q8N3E9 789 aa16.01■□□□□ 0.15
AC090518.1-201ENST00000562300 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
AC090518.1-201ENST00000562300 CREBZFQ9NS37 354 aa15.91■□□□□ 0.14
AC090518.1-201ENST00000562300 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
AC090518.1-201ENST00000562300 PLEKHG5O94827 1062 aa15.88■□□□□ 0.13
AC090518.1-201ENST00000562300 FXR2P51116 673 aaKnown RBP eCLIP15.83■□□□□ 0.12
AC090518.1-201ENST00000562300 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
AC090518.1-201ENST00000562300 RTN4Q9NQC3 1192 aaKnown RBP15.79■□□□□ 0.12
AC090518.1-201ENST00000562300 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
AC090518.1-201ENST00000562300 MNX1P50219 401 aaPredicted RBP15.78■□□□□ 0.12
AC090518.1-201ENST00000562300 AMER1Q5JTC6 1135 aaPredicted RBP15.78■□□□□ 0.12
AC090518.1-201ENST00000562300 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.11
AC090518.1-201ENST00000562300 SPOCK2Q92563 424 aa15.77■□□□□ 0.11
AC090518.1-201ENST00000562300 PRKAR2AP13861 404 aaKnown RBP15.76■□□□□ 0.11
AC090518.1-201ENST00000562300 FARP1Q9Y4F1 1045 aaPredicted RBP15.65■□□□□ 0.1
AC090518.1-201ENST00000562300 NUBP1P53384 320 aa15.62■□□□□ 0.09
AC090518.1-201ENST00000562300 NPM1P06748 294 aaKnown RBP eCLIP15.6■□□□□ 0.09
AC090518.1-201ENST00000562300 PKD2Q13563 968 aa15.53■□□□□ 0.08
AC090518.1-201ENST00000562300 RASEFQ8IZ41 740 aa15.53■□□□□ 0.08
AC090518.1-201ENST00000562300 CIZ1Q9ULV3 898 aaPredicted RBP15.52■□□□□ 0.07
AC090518.1-201ENST00000562300 DCAF8Q5TAQ9 597 aa15.46■□□□□ 0.07
AC090518.1-201ENST00000562300 FAM212AQ96EL1 285 aa15.46■□□□□ 0.06
AC090518.1-201ENST00000562300 GSE1Q14687 1217 aa15.44■□□□□ 0.06
AC090518.1-201ENST00000562300 TSPYL2Q9H2G4 693 aaPredicted RBP15.4■□□□□ 0.06
AC090518.1-201ENST00000562300 ECM2O94769 699 aaPredicted RBP15.38■□□□□ 0.05
AC090518.1-201ENST00000562300 CD44P16070 742 aaKnown RBP15.32■□□□□ 0.04
AC090518.1-201ENST00000562300 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms