RNA–Protein interactions for RNA: ENST00000562057.5

SPINT1-202, Transcript of serine peptidase inhibitor, Kunitz type 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPINT1, Length 2,456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPINT1-202ENST00000562057 NISCHQ9Y2I1 1504 aa34.24■■■■□ 3.07
SPINT1-202ENST00000562057 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
SPINT1-202ENST00000562057 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
SPINT1-202ENST00000562057 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
SPINT1-202ENST00000562057 SUPT5HO00267 1087 aaKnown RBP28.76■■■□□ 2.19
SPINT1-202ENST00000562057 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
SPINT1-202ENST00000562057 DCAF1Q9Y4B6 1507 aa28.08■■■□□ 2.09
SPINT1-202ENST00000562057 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
SPINT1-202ENST00000562057 MYO15BQ96JP2 1530 aa27.88■■■□□ 2.05
SPINT1-202ENST00000562057 HRCP23327 699 aa27.69■■■□□ 2.02
SPINT1-202ENST00000562057 ABCC9O60706 1549 aa27.36■■□□□ 1.97
SPINT1-202ENST00000562057 SCRIBQ14160 1630 aa27.29■■□□□ 1.96
SPINT1-202ENST00000562057 PCGF6Q9BYE7 350 aa27.21■■□□□ 1.95
SPINT1-202ENST00000562057 LOC105371045A0A1W2PR82 267 aa27.16■■□□□ 1.94
SPINT1-202ENST00000562057 RSF1Q96T23 1441 aaPredicted RBP27.13■■□□□ 1.93
SPINT1-202ENST00000562057 NACADO15069 1562 aa26.86■■□□□ 1.89
SPINT1-202ENST00000562057 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
SPINT1-202ENST00000562057 PPARGC1BQ86YN6 1023 aaKnown RBP26.85■■□□□ 1.89
SPINT1-202ENST00000562057 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
SPINT1-202ENST00000562057 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
SPINT1-202ENST00000562057 TRIM26Q12899 539 aaPredicted RBP26.66■■□□□ 1.86
SPINT1-202ENST00000562057 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
SPINT1-202ENST00000562057 FAM9AQ8IZU1 332 aaPredicted RBP26.58■■□□□ 1.85
SPINT1-202ENST00000562057 WIZO95785 1651 aa26.5■■□□□ 1.83
SPINT1-202ENST00000562057 PELP1Q8IZL8 1130 aaKnown RBP26.44■■□□□ 1.82
SPINT1-202ENST00000562057 ZEB1P37275 1124 aaPredicted RBP26.4■■□□□ 1.82
SPINT1-202ENST00000562057 EHMT2Q96KQ7 1210 aa26.37■■□□□ 1.81
SPINT1-202ENST00000562057 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.81
SPINT1-202ENST00000562057 EIF4G1Q04637 1599 aaKnown RBP26.14■■□□□ 1.78
SPINT1-202ENST00000562057 TOP2AP11388 1531 aaKnown RBP26.07■■□□□ 1.76
SPINT1-202ENST00000562057 SMARCA4P51532 1647 aa26.07■■□□□ 1.76
SPINT1-202ENST00000562057 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
SPINT1-202ENST00000562057 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
SPINT1-202ENST00000562057 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
SPINT1-202ENST00000562057 SMARCA2P51531 1590 aa25.93■■□□□ 1.74
SPINT1-202ENST00000562057 SCAF1Q9H7N4 1312 aaKnown RBP25.87■■□□□ 1.73
SPINT1-202ENST00000562057 PABPN1Q86U42 306 aaKnown RBP eCLIP25.76■■□□□ 1.71
SPINT1-202ENST00000562057 SOGA1O94964 1423 aa25.72■■□□□ 1.71
SPINT1-202ENST00000562057 BICRAQ9NZM4 1560 aa25.69■■□□□ 1.7
SPINT1-202ENST00000562057 CEP162Q5TB80 1403 aa25.63■■□□□ 1.69
SPINT1-202ENST00000562057 WRNQ14191 1432 aaPredicted RBP eCLIP25.6■■□□□ 1.69
SPINT1-202ENST00000562057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.6■■□□□ 1.69
SPINT1-202ENST00000562057 EEA1Q15075 1411 aa25.59■■□□□ 1.69
SPINT1-202ENST00000562057 CSRNP3Q8WYN3 585 aa25.58■■□□□ 1.69
SPINT1-202ENST00000562057 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.69
SPINT1-202ENST00000562057 TNIKQ9UKE5 1360 aa25.58■■□□□ 1.68
SPINT1-202ENST00000562057 PEG3Q9GZU2 1588 aa25.54■■□□□ 1.68
SPINT1-202ENST00000562057 CCER1Q8TC90 406 aaPredicted RBP25.54■■□□□ 1.68
SPINT1-202ENST00000562057 TTBK1Q5TCY1 1321 aaPredicted RBP25.53■■□□□ 1.68
SPINT1-202ENST00000562057 UBTFP17480 764 aaKnown RBP25.52■■□□□ 1.68
SPINT1-202ENST00000562057 ACIN1Q9UKV3 1341 aaKnown RBP25.48■■□□□ 1.67
SPINT1-202ENST00000562057 GOLGA3Q08378 1498 aa25.43■■□□□ 1.66
SPINT1-202ENST00000562057 MYT1Q01538 1121 aa25.42■■□□□ 1.66
SPINT1-202ENST00000562057 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
SPINT1-202ENST00000562057 SYNJ1O43426 1573 aa25.36■■□□□ 1.65
SPINT1-202ENST00000562057 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
SPINT1-202ENST00000562057 CENPBP07199 599 aaPredicted RBP25.33■■□□□ 1.65
SPINT1-202ENST00000562057 NEUROD1Q13562 356 aa25.3■■□□□ 1.64
SPINT1-202ENST00000562057 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
SPINT1-202ENST00000562057 KIF21BO75037 1637 aa25.23■■□□□ 1.63
SPINT1-202ENST00000562057 DIEXFQ68CQ4 756 aaKnown RBP25.22■■□□□ 1.63
SPINT1-202ENST00000562057 GTF3C3Q9Y5Q9 886 aa25.16■■□□□ 1.62
SPINT1-202ENST00000562057 CLIP1P30622 1438 aa25.15■■□□□ 1.62
SPINT1-202ENST00000562057 RAPGEF2Q9Y4G8 1499 aa25.08■■□□□ 1.61
SPINT1-202ENST00000562057 VPS8Q8N3P4 1428 aa25.04■■□□□ 1.6
SPINT1-202ENST00000562057 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
SPINT1-202ENST00000562057 RANGAP1P46060 587 aaPredicted RBP25.01■■□□□ 1.59
SPINT1-202ENST00000562057 HNRNPUL2Q1KMD3 747 aaKnown RBP24.98■■□□□ 1.59
SPINT1-202ENST00000562057 APLP2Q06481 763 aa24.97■■□□□ 1.59
SPINT1-202ENST00000562057 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
SPINT1-202ENST00000562057 ZNF316A6NFI3 1004 aaPredicted RBP24.87■■□□□ 1.57
SPINT1-202ENST00000562057 NCAPD3P42695 1498 aa24.87■■□□□ 1.57
SPINT1-202ENST00000562057 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
SPINT1-202ENST00000562057 PRXQ9BXM0 1461 aa24.82■■□□□ 1.56
SPINT1-202ENST00000562057 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
SPINT1-202ENST00000562057 CUX1P39880 1505 aa24.78■■□□□ 1.56
SPINT1-202ENST00000562057 ARAP1Q96P48 1450 aa24.72■■□□□ 1.55
SPINT1-202ENST00000562057 KIF27Q86VH2 1401 aa24.71■■□□□ 1.55
SPINT1-202ENST00000562057 CFTRP13569 1480 aa24.7■■□□□ 1.54
SPINT1-202ENST00000562057 KANK4Q5T7N3 995 aaPredicted RBP24.61■■□□□ 1.53
SPINT1-202ENST00000562057 YTHDC1Q96MU7 727 aaKnown RBP24.59■■□□□ 1.53
SPINT1-202ENST00000562057 MIER1Q8N108 512 aa24.52■■□□□ 1.52
SPINT1-202ENST00000562057 ARHGAP35Q9NRY4 1499 aa24.5■■□□□ 1.51
SPINT1-202ENST00000562057 DHX57Q6P158 1386 aaKnown RBP24.48■■□□□ 1.51
SPINT1-202ENST00000562057 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
SPINT1-202ENST00000562057 CLSPNQ9HAW4 1339 aa24.47■■□□□ 1.51
SPINT1-202ENST00000562057 CUX2O14529 1486 aa24.46■■□□□ 1.51
SPINT1-202ENST00000562057 RRBP1Q9P2E9 1410 aaKnown RBP24.46■■□□□ 1.51
SPINT1-202ENST00000562057 IGF1RP08069 1367 aa24.42■■□□□ 1.5
SPINT1-202ENST00000562057 CADPSQ9ULU8 1353 aa24.41■■□□□ 1.5
SPINT1-202ENST00000562057 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
SPINT1-202ENST00000562057 FGD5Q6ZNL6 1462 aa24.34■■□□□ 1.49
SPINT1-202ENST00000562057 CARMIL1Q5VZK9 1371 aa24.33■■□□□ 1.49
SPINT1-202ENST00000562057 ITGAEP38570 1179 aa24.32■■□□□ 1.48
SPINT1-202ENST00000562057 TIAM1Q13009 1591 aa24.25■■□□□ 1.47
SPINT1-202ENST00000562057 MAP3K1Q13233 1512 aa24.21■■□□□ 1.47
SPINT1-202ENST00000562057 CC2D2AQ9P2K1 1620 aa24.21■■□□□ 1.47
SPINT1-202ENST00000562057 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
SPINT1-202ENST00000562057 LRRC9Q6ZRR7 1453 aa24.16■■□□□ 1.46
SPINT1-202ENST00000562057 RAB3GAP2Q9H2M9 1393 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms