RNA–Protein interactions for RNA: ENST00000561458.5

AC055874.1-201, humanhuman

TSL 2 BASIC

Gene AC055874.1, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-201ENST00000561458 AEBP2Q6ZN18 517 aaPredicted RBP24.05■■□□□ 1.44
AC055874.1-201ENST00000561458 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
AC055874.1-201ENST00000561458 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
AC055874.1-201ENST00000561458 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
AC055874.1-201ENST00000561458 FOXD1Q16676 465 aa19.19■□□□□ 0.66
AC055874.1-201ENST00000561458 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
AC055874.1-201ENST00000561458 MSH5O43196 834 aa18.09■□□□□ 0.49
AC055874.1-201ENST00000561458 PIAS4Q8N2W9 510 aaPredicted RBP17.94■□□□□ 0.46
AC055874.1-201ENST00000561458 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
AC055874.1-201ENST00000561458 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
AC055874.1-201ENST00000561458 ADRA2BP18089 450 aa17.74■□□□□ 0.43
AC055874.1-201ENST00000561458 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
AC055874.1-201ENST00000561458 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
AC055874.1-201ENST00000561458 DMRT2Q9Y5R5 561 aa16.31■□□□□ 0.2
AC055874.1-201ENST00000561458 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
AC055874.1-201ENST00000561458 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
AC055874.1-201ENST00000561458 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
AC055874.1-201ENST00000561458 CACNB1Q02641 598 aaPredicted RBP15.62■□□□□ 0.09
AC055874.1-201ENST00000561458 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
AC055874.1-201ENST00000561458 RNF216Q9NWF9 866 aaPredicted RBP15.49■□□□□ 0.07
AC055874.1-201ENST00000561458 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
AC055874.1-201ENST00000561458 NCBP3Q53F19 620 aaKnown RBP15.23■□□□□ 0.03
AC055874.1-201ENST00000561458 C1QBPQ07021 282 aaKnown RBP15.18■□□□□ 0.02
AC055874.1-201ENST00000561458 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
AC055874.1-201ENST00000561458 NPM3O75607 178 aaKnown RBP14.95□□□□□ -0.02
AC055874.1-201ENST00000561458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
AC055874.1-201ENST00000561458 U3KPZ7 1027 aaPredicted RBP14.56□□□□□ -0.08
AC055874.1-201ENST00000561458 KCNA4P22459 653 aa14.51□□□□□ -0.09
AC055874.1-201ENST00000561458 CAPN15O75808 1086 aa14.43□□□□□ -0.1
AC055874.1-201ENST00000561458 SPINK5Q9NQ38 1064 aaPredicted RBP14.39□□□□□ -0.11
AC055874.1-201ENST00000561458 DSG3P32926 999 aa14.34□□□□□ -0.11
AC055874.1-201ENST00000561458 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
AC055874.1-201ENST00000561458 APLP2Q06481 763 aa14.24□□□□□ -0.13
AC055874.1-201ENST00000561458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
AC055874.1-201ENST00000561458 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
AC055874.1-201ENST00000561458 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
AC055874.1-201ENST00000561458 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
AC055874.1-201ENST00000561458 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
AC055874.1-201ENST00000561458 ABCB7O75027 752 aa14.06□□□□□ -0.16
AC055874.1-201ENST00000561458 POTEHQ6S545 545 aa14□□□□□ -0.17
AC055874.1-201ENST00000561458 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
AC055874.1-201ENST00000561458 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
AC055874.1-201ENST00000561458 POLA2Q14181 598 aa13.71□□□□□ -0.21
AC055874.1-201ENST00000561458 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
AC055874.1-201ENST00000561458 FOXD4L1Q9NU39 408 aa13.63□□□□□ -0.23
AC055874.1-201ENST00000561458 ATF5Q9Y2D1 282 aaPredicted RBP13.49□□□□□ -0.25
AC055874.1-201ENST00000561458 ZBTB12Q9Y330 459 aaPredicted RBP13.49□□□□□ -0.25
AC055874.1-201ENST00000561458 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
AC055874.1-201ENST00000561458 AKT1S1Q96B36 256 aa13.37□□□□□ -0.27
AC055874.1-201ENST00000561458 ZBTB22O15209 634 aa13.31□□□□□ -0.28
AC055874.1-201ENST00000561458 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
AC055874.1-201ENST00000561458 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
AC055874.1-201ENST00000561458 REM2Q8IYK8 340 aaPredicted RBP13.23□□□□□ -0.29
AC055874.1-201ENST00000561458 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
AC055874.1-201ENST00000561458 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
AC055874.1-201ENST00000561458 FBLN2P98095 1184 aa13.08□□□□□ -0.32
AC055874.1-201ENST00000561458 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
AC055874.1-201ENST00000561458 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
AC055874.1-201ENST00000561458 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
AC055874.1-201ENST00000561458 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
AC055874.1-201ENST00000561458 FXR2P51116 673 aaKnown RBP eCLIP13□□□□□ -0.33
AC055874.1-201ENST00000561458 HAX1O00165 279 aa12.94□□□□□ -0.34
AC055874.1-201ENST00000561458 MKRN4PQ13434 485 aaPredicted RBP12.87□□□□□ -0.35
AC055874.1-201ENST00000561458 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
AC055874.1-201ENST00000561458 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
AC055874.1-201ENST00000561458 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
AC055874.1-201ENST00000561458 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
AC055874.1-201ENST00000561458 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
AC055874.1-201ENST00000561458 EVX2Q03828 476 aa12.69□□□□□ -0.38
AC055874.1-201ENST00000561458 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
AC055874.1-201ENST00000561458 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
AC055874.1-201ENST00000561458 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
AC055874.1-201ENST00000561458 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
AC055874.1-201ENST00000561458 CSRNP3Q8WYN3 585 aa12.55□□□□□ -0.4
AC055874.1-201ENST00000561458 GABBR2O75899 941 aa12.44□□□□□ -0.42
AC055874.1-201ENST00000561458 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
AC055874.1-201ENST00000561458 CD44P16070 742 aaKnown RBP12.36□□□□□ -0.43
AC055874.1-201ENST00000561458 EHMT2Q96KQ7 1210 aa12.35□□□□□ -0.43
AC055874.1-201ENST00000561458 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
AC055874.1-201ENST00000561458 CLCN6P51797 869 aa12.25□□□□□ -0.45
AC055874.1-201ENST00000561458 LHX8Q68G74 356 aa12.24□□□□□ -0.45
AC055874.1-201ENST00000561458 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
AC055874.1-201ENST00000561458 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
AC055874.1-201ENST00000561458 ZNF579Q8NAF0 562 aaKnown RBP12.16□□□□□ -0.46
AC055874.1-201ENST00000561458 ZRANB1Q9UGI0 708 aa12.16□□□□□ -0.46
AC055874.1-201ENST00000561458 POTEIP0CG38 1075 aa12.14□□□□□ -0.47
AC055874.1-201ENST00000561458 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
AC055874.1-201ENST00000561458 PAK3O75914 559 aaPredicted RBP12.08□□□□□ -0.48
AC055874.1-201ENST00000561458 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
AC055874.1-201ENST00000561458 GALR2O43603 387 aaPredicted RBP11.99□□□□□ -0.49
AC055874.1-201ENST00000561458 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
AC055874.1-201ENST00000561458 PHF12Q96QT6 1004 aa11.95□□□□□ -0.5
AC055874.1-201ENST00000561458 PROM2Q8N271 834 aa11.88□□□□□ -0.51
AC055874.1-201ENST00000561458 MS4A3Q96HJ5 214 aa11.79□□□□□ -0.52
AC055874.1-201ENST00000561458 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.53
AC055874.1-201ENST00000561458 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
AC055874.1-201ENST00000561458 PELP1Q8IZL8 1130 aaKnown RBP11.75□□□□□ -0.53
AC055874.1-201ENST00000561458 OTUD5Q96G74 571 aa11.75□□□□□ -0.53
AC055874.1-201ENST00000561458 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
AC055874.1-201ENST00000561458 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 235.3 ms