RNA–Protein interactions for RNA: ENST00000561440.1

RPS17-210, Transcript of ribosomal protein S17, humanhuman

TSL 2

Gene RPS17, Length 1,922 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS17-210ENST00000561440 NISCHQ9Y2I1 1504 aa36.35■■■■□ 3.41
RPS17-210ENST00000561440 CCDC180Q9P1Z9 1646 aa31.51■■■□□ 2.64
RPS17-210ENST00000561440 ZCCHC6Q5VYS8 1495 aaKnown RBP30.73■■■□□ 2.51
RPS17-210ENST00000561440 DCAF1Q9Y4B6 1507 aa30.24■■■□□ 2.43
RPS17-210ENST00000561440 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
RPS17-210ENST00000561440 MYO15BQ96JP2 1530 aa29.62■■■□□ 2.33
RPS17-210ENST00000561440 DCAF8L2P0C7V8 631 aa29.39■■■□□ 2.3
RPS17-210ENST00000561440 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
RPS17-210ENST00000561440 NACADO15069 1562 aa29.09■■■□□ 2.25
RPS17-210ENST00000561440 ABCC9O60706 1549 aa28.94■■■□□ 2.22
RPS17-210ENST00000561440 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
RPS17-210ENST00000561440 RB1CC1Q8TDY2 1594 aa28.61■■■□□ 2.17
RPS17-210ENST00000561440 CHIC1Q5VXU3 224 aa28.49■■■□□ 2.15
RPS17-210ENST00000561440 RSF1Q96T23 1441 aaPredicted RBP28.43■■■□□ 2.14
RPS17-210ENST00000561440 BAZ1AQ9NRL2 1556 aaPredicted RBP28.06■■■□□ 2.08
RPS17-210ENST00000561440 UNC13AQ9UPW8 1703 aa28.05■■■□□ 2.08
RPS17-210ENST00000561440 CECR2Q9BXF3 1484 aa28.03■■■□□ 2.08
RPS17-210ENST00000561440 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
RPS17-210ENST00000561440 WIZO95785 1651 aa27.86■■■□□ 2.05
RPS17-210ENST00000561440 SMARCA4P51532 1647 aa27.8■■■□□ 2.04
RPS17-210ENST00000561440 TOP2AP11388 1531 aaKnown RBP27.7■■■□□ 2.03
RPS17-210ENST00000561440 BICRAQ9NZM4 1560 aa27.66■■■□□ 2.02
RPS17-210ENST00000561440 EIF4G1Q04637 1599 aaKnown RBP27.59■■■□□ 2.01
RPS17-210ENST00000561440 PEG3Q9GZU2 1588 aa27.53■■■□□ 2
RPS17-210ENST00000561440 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
RPS17-210ENST00000561440 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
RPS17-210ENST00000561440 CCDC88BA6NC98 1476 aa27.32■■□□□ 1.96
RPS17-210ENST00000561440 LOC105371045A0A1W2PR82 267 aa27.26■■□□□ 1.95
RPS17-210ENST00000561440 PABPN1Q86U42 306 aaKnown RBP eCLIP27.11■■□□□ 1.93
RPS17-210ENST00000561440 ATAD2BQ9ULI0 1458 aa27.08■■□□□ 1.93
RPS17-210ENST00000561440 EEA1Q15075 1411 aa26.99■■□□□ 1.91
RPS17-210ENST00000561440 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
RPS17-210ENST00000561440 HRCP23327 699 aa26.96■■□□□ 1.91
RPS17-210ENST00000561440 ABCC8Q09428 1581 aa26.94■■□□□ 1.9
RPS17-210ENST00000561440 PCGF6Q9BYE7 350 aa26.92■■□□□ 1.9
RPS17-210ENST00000561440 TRIM26Q12899 539 aaPredicted RBP26.91■■□□□ 1.9
RPS17-210ENST00000561440 HMGXB3Q12766 1538 aa26.88■■□□□ 1.89
RPS17-210ENST00000561440 FAM9AQ8IZU1 332 aaPredicted RBP26.83■■□□□ 1.89
RPS17-210ENST00000561440 DNAJC5BQ9UF47 199 aa26.81■■□□□ 1.88
RPS17-210ENST00000561440 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
RPS17-210ENST00000561440 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
RPS17-210ENST00000561440 SYNJ1O43426 1573 aa26.61■■□□□ 1.85
RPS17-210ENST00000561440 TNIKQ9UKE5 1360 aa26.6■■□□□ 1.85
RPS17-210ENST00000561440 SOGA1O94964 1423 aa26.57■■□□□ 1.84
RPS17-210ENST00000561440 KIF21BO75037 1637 aa26.56■■□□□ 1.84
RPS17-210ENST00000561440 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
RPS17-210ENST00000561440 TOP2BQ02880 1626 aa26.55■■□□□ 1.84
RPS17-210ENST00000561440 GOLGA3Q08378 1498 aa26.54■■□□□ 1.84
RPS17-210ENST00000561440 CSRNP3Q8WYN3 585 aa26.53■■□□□ 1.84
RPS17-210ENST00000561440 PRDM2Q13029 1718 aa26.5■■□□□ 1.83
RPS17-210ENST00000561440 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
RPS17-210ENST00000561440 CEP162Q5TB80 1403 aa26.44■■□□□ 1.82
RPS17-210ENST00000561440 ZEB1P37275 1124 aaPredicted RBP26.41■■□□□ 1.82
RPS17-210ENST00000561440 RUSC2Q8N2Y8 1516 aa26.4■■□□□ 1.82
RPS17-210ENST00000561440 CFTRP13569 1480 aa26.38■■□□□ 1.81
RPS17-210ENST00000561440 EHMT2Q96KQ7 1210 aa26.26■■□□□ 1.79
RPS17-210ENST00000561440 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
RPS17-210ENST00000561440 CUX1P39880 1505 aa26.18■■□□□ 1.78
RPS17-210ENST00000561440 UBTFP17480 764 aaKnown RBP26.18■■□□□ 1.78
RPS17-210ENST00000561440 CC2D2AQ9P2K1 1620 aa26.13■■□□□ 1.77
RPS17-210ENST00000561440 PRXQ9BXM0 1461 aa26.09■■□□□ 1.77
RPS17-210ENST00000561440 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
RPS17-210ENST00000561440 CLIP1P30622 1438 aa26.06■■□□□ 1.76
RPS17-210ENST00000561440 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
RPS17-210ENST00000561440 RAPGEF2Q9Y4G8 1499 aa26.05■■□□□ 1.76
RPS17-210ENST00000561440 VPS8Q8N3P4 1428 aa26.01■■□□□ 1.75
RPS17-210ENST00000561440 PPARGC1BQ86YN6 1023 aaKnown RBP25.93■■□□□ 1.74
RPS17-210ENST00000561440 DNMBPQ6XZF7 1577 aa25.8■■□□□ 1.72
RPS17-210ENST00000561440 LAMC3Q9Y6N6 1575 aa25.79■■□□□ 1.72
RPS17-210ENST00000561440 FANCD2Q9BXW9 1451 aa25.78■■□□□ 1.72
RPS17-210ENST00000561440 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
RPS17-210ENST00000561440 CUX2O14529 1486 aa25.73■■□□□ 1.71
RPS17-210ENST00000561440 ARAP1Q96P48 1450 aa25.71■■□□□ 1.71
RPS17-210ENST00000561440 APLP2Q06481 763 aa25.71■■□□□ 1.71
RPS17-210ENST00000561440 IGF1RP08069 1367 aa25.65■■□□□ 1.7
RPS17-210ENST00000561440 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.7
RPS17-210ENST00000561440 TOPBP1Q92547 1522 aa25.62■■□□□ 1.69
RPS17-210ENST00000561440 CCER1Q8TC90 406 aaPredicted RBP25.61■■□□□ 1.69
RPS17-210ENST00000561440 CUL7Q14999 1698 aa25.6■■□□□ 1.69
RPS17-210ENST00000561440 MAP3K1Q13233 1512 aa25.57■■□□□ 1.68
RPS17-210ENST00000561440 CARMIL1Q5VZK9 1371 aa25.56■■□□□ 1.68
RPS17-210ENST00000561440 ARHGAP35Q9NRY4 1499 aa25.56■■□□□ 1.68
RPS17-210ENST00000561440 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
RPS17-210ENST00000561440 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
RPS17-210ENST00000561440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.67
RPS17-210ENST00000561440 PDS5BQ9NTI5 1447 aa25.49■■□□□ 1.67
RPS17-210ENST00000561440 NESP48681 1621 aa25.45■■□□□ 1.66
RPS17-210ENST00000561440 EFCAB5A4FU69 1503 aa25.43■■□□□ 1.66
RPS17-210ENST00000561440 CTTNBP2Q8WZ74 1663 aa25.42■■□□□ 1.66
RPS17-210ENST00000561440 TTBK1Q5TCY1 1321 aaPredicted RBP25.41■■□□□ 1.66
RPS17-210ENST00000561440 URB2Q14146 1524 aaKnown RBP25.4■■□□□ 1.66
RPS17-210ENST00000561440 FHAD1B1AJZ9 1412 aa25.39■■□□□ 1.66
RPS17-210ENST00000561440 RRBP1Q9P2E9 1410 aaKnown RBP25.39■■□□□ 1.66
RPS17-210ENST00000561440 ABCA5Q8WWZ7 1642 aa25.39■■□□□ 1.66
RPS17-210ENST00000561440 RAD54L2Q9Y4B4 1467 aa25.35■■□□□ 1.65
RPS17-210ENST00000561440 TIAM1Q13009 1591 aa25.35■■□□□ 1.65
RPS17-210ENST00000561440 CFAP43Q8NDM7 1665 aa25.32■■□□□ 1.64
RPS17-210ENST00000561440 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
RPS17-210ENST00000561440 CLSPNQ9HAW4 1339 aa25.31■■□□□ 1.64
RPS17-210ENST00000561440 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.642e-9■■■□□ 16.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms