RNA–Protein interactions for RNA: ENST00000561335.2

AC090888.1-201, humanhuman

BASIC

Gene AC090888.1, Length 1,141 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.1-201ENST00000561335 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
AC090888.1-201ENST00000561335 CHIC1Q5VXU3 224 aa26.94■■□□□ 1.9
AC090888.1-201ENST00000561335 SENP3Q9H4L4 574 aaPredicted RBP24.82■■□□□ 1.56
AC090888.1-201ENST00000561335 PHF23Q9BUL5 403 aaPredicted RBP24.37■■□□□ 1.49
AC090888.1-201ENST00000561335 POTEDQ86YR6 584 aa24.07■■□□□ 1.44
AC090888.1-201ENST00000561335 FOXD1Q16676 465 aa23.38■■□□□ 1.33
AC090888.1-201ENST00000561335 MSH5O43196 834 aa22.28■■□□□ 1.16
AC090888.1-201ENST00000561335 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
AC090888.1-201ENST00000561335 PIAS4Q8N2W9 510 aaPredicted RBP21.5■■□□□ 1.03
AC090888.1-201ENST00000561335 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
AC090888.1-201ENST00000561335 ADRA2BP18089 450 aa20.8■□□□□ 0.92
AC090888.1-201ENST00000561335 CACNB1Q02641 598 aaPredicted RBP19.97■□□□□ 0.79
AC090888.1-201ENST00000561335 DMRT2Q9Y5R5 561 aa19.51■□□□□ 0.71
AC090888.1-201ENST00000561335 MAPK8IP2Q13387 824 aaPredicted RBP19.47■□□□□ 0.71
AC090888.1-201ENST00000561335 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
AC090888.1-201ENST00000561335 RNF39Q9H2S5 420 aa18.95■□□□□ 0.62
AC090888.1-201ENST00000561335 PPP4R3CPQ6ZMV5 832 aa18.84■□□□□ 0.61
AC090888.1-201ENST00000561335 DCAF8L1A6NGE4 600 aa18.8■□□□□ 0.6
AC090888.1-201ENST00000561335 POTEHQ6S545 545 aa18.58■□□□□ 0.56
AC090888.1-201ENST00000561335 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
AC090888.1-201ENST00000561335 CNKSR2Q8WXI2 1034 aa18.47■□□□□ 0.55
AC090888.1-201ENST00000561335 HOXD11P31277 338 aaPredicted RBP18.29■□□□□ 0.52
AC090888.1-201ENST00000561335 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
AC090888.1-201ENST00000561335 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
AC090888.1-201ENST00000561335 NPM3O75607 178 aaKnown RBP17.88■□□□□ 0.45
AC090888.1-201ENST00000561335 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
AC090888.1-201ENST00000561335 KCNA4P22459 653 aa17.69■□□□□ 0.42
AC090888.1-201ENST00000561335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
AC090888.1-201ENST00000561335 DSG3P32926 999 aa17.32■□□□□ 0.36
AC090888.1-201ENST00000561335 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
AC090888.1-201ENST00000561335 CAPN15O75808 1086 aa17.09■□□□□ 0.33
AC090888.1-201ENST00000561335 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
AC090888.1-201ENST00000561335 SLC4A2P04920 1241 aa16.98■□□□□ 0.31
AC090888.1-201ENST00000561335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
AC090888.1-201ENST00000561335 APLP2Q06481 763 aa16.8■□□□□ 0.28
AC090888.1-201ENST00000561335 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
AC090888.1-201ENST00000561335 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
AC090888.1-201ENST00000561335 SP7Q8TDD2 431 aaPredicted RBP16.79■□□□□ 0.28
AC090888.1-201ENST00000561335 CHRDL2Q6WN34 429 aa16.7■□□□□ 0.26
AC090888.1-201ENST00000561335 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
AC090888.1-201ENST00000561335 ABCB7O75027 752 aa16.64■□□□□ 0.25
AC090888.1-201ENST00000561335 MYCNP04198 464 aaPredicted RBP16.6■□□□□ 0.25
AC090888.1-201ENST00000561335 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
AC090888.1-201ENST00000561335 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
AC090888.1-201ENST00000561335 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
AC090888.1-201ENST00000561335 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
AC090888.1-201ENST00000561335 ZBTB22O15209 634 aa16.2■□□□□ 0.18
AC090888.1-201ENST00000561335 POLA2Q14181 598 aa16.16■□□□□ 0.18
AC090888.1-201ENST00000561335 HAX1O00165 279 aa16.08■□□□□ 0.16
AC090888.1-201ENST00000561335 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
AC090888.1-201ENST00000561335 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
AC090888.1-201ENST00000561335 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
AC090888.1-201ENST00000561335 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
AC090888.1-201ENST00000561335 EVX2Q03828 476 aa15.88■□□□□ 0.13
AC090888.1-201ENST00000561335 PLSCR2Q9NRY7 297 aa15.87■□□□□ 0.13
AC090888.1-201ENST00000561335 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
AC090888.1-201ENST00000561335 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
AC090888.1-201ENST00000561335 LHX8Q68G74 356 aa15.73■□□□□ 0.11
AC090888.1-201ENST00000561335 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
AC090888.1-201ENST00000561335 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
AC090888.1-201ENST00000561335 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
AC090888.1-201ENST00000561335 PITPNM1O00562 1244 aa15.62■□□□□ 0.09
AC090888.1-201ENST00000561335 FBLN2P98095 1184 aa15.62■□□□□ 0.09
AC090888.1-201ENST00000561335 OSCARQ8IYS5 282 aa15.61■□□□□ 0.09
AC090888.1-201ENST00000561335 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
AC090888.1-201ENST00000561335 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
AC090888.1-201ENST00000561335 SPDYE2Q495Y8 402 aa15.4■□□□□ 0.06
AC090888.1-201ENST00000561335 GABBR2O75899 941 aa15.38■□□□□ 0.05
AC090888.1-201ENST00000561335 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
AC090888.1-201ENST00000561335 C19orf67A6NJJ6 358 aa15.27■□□□□ 0.04
AC090888.1-201ENST00000561335 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
AC090888.1-201ENST00000561335 PRKAR2AP13861 404 aaKnown RBP15.18■□□□□ 0.02
AC090888.1-201ENST00000561335 SSUH2Q9Y2M2 353 aa15.15■□□□□ 0.02
AC090888.1-201ENST00000561335 SPDYE1Q8NFV5 336 aaPredicted RBP15.11■□□□□ 0.01
AC090888.1-201ENST00000561335 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
AC090888.1-201ENST00000561335 CLEC11AQ9Y240 323 aa15.08■□□□□ 0
AC090888.1-201ENST00000561335 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
AC090888.1-201ENST00000561335 POTEMA6NI47 508 aa14.9□□□□□ -0.02
AC090888.1-201ENST00000561335 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
AC090888.1-201ENST00000561335 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
AC090888.1-201ENST00000561335 POTEGQ6S5H5 508 aa14.81□□□□□ -0.04
AC090888.1-201ENST00000561335 CHADLQ6NUI6 762 aa14.78□□□□□ -0.04
AC090888.1-201ENST00000561335 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
AC090888.1-201ENST00000561335 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
AC090888.1-201ENST00000561335 DCBLD2Q96PD2 775 aa14.64□□□□□ -0.07
AC090888.1-201ENST00000561335 CD44P16070 742 aaKnown RBP14.61□□□□□ -0.07
AC090888.1-201ENST00000561335 PCDH10Q9P2E7 1040 aa14.61□□□□□ -0.07
AC090888.1-201ENST00000561335 POTEB2H3BUK9 544 aa14.58□□□□□ -0.08
AC090888.1-201ENST00000561335 CLCN6P51797 869 aa14.52□□□□□ -0.09
AC090888.1-201ENST00000561335 FARP1Q9Y4F1 1045 aaPredicted RBP14.52□□□□□ -0.09
AC090888.1-201ENST00000561335 CREBZFQ9NS37 354 aa14.44□□□□□ -0.1
AC090888.1-201ENST00000561335 PROM2Q8N271 834 aa14.41□□□□□ -0.1
AC090888.1-201ENST00000561335 LCE2DQ5TA82 110 aaPredicted RBP14.34□□□□□ -0.11
AC090888.1-201ENST00000561335 NPM1P06748 294 aaKnown RBP eCLIP14.31□□□□□ -0.12
AC090888.1-201ENST00000561335 ZNF579Q8NAF0 562 aaKnown RBP14.31□□□□□ -0.12
AC090888.1-201ENST00000561335 GALR2O43603 387 aaPredicted RBP14.29□□□□□ -0.12
AC090888.1-201ENST00000561335 FKBP8Q14318 412 aa14.27□□□□□ -0.13
AC090888.1-201ENST00000561335 PAK3O75914 559 aaPredicted RBP14.26□□□□□ -0.13
AC090888.1-201ENST00000561335 PLEKHG5O94827 1062 aa14.24□□□□□ -0.13
AC090888.1-201ENST00000561335 ZRANB1Q9UGI0 708 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms