RNA–Protein interactions for RNA: ENST00000561243.5

ACAN-208, Transcript of aggrecan, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ACAN, Length 7,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-208ENST00000561243 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
ACAN-208ENST00000561243 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
ACAN-208ENST00000561243 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
ACAN-208ENST00000561243 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
ACAN-208ENST00000561243 PELP1Q8IZL8 1130 aaKnown RBP17.88■□□□□ 0.45
ACAN-208ENST00000561243 NISCHQ9Y2I1 1504 aa17.84■□□□□ 0.45
ACAN-208ENST00000561243 APLP2Q06481 763 aa17.58■□□□□ 0.41
ACAN-208ENST00000561243 TTBK1Q5TCY1 1321 aaPredicted RBP17.45■□□□□ 0.38
ACAN-208ENST00000561243 FAM9AQ8IZU1 332 aaPredicted RBP17.41■□□□□ 0.38
ACAN-208ENST00000561243 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
ACAN-208ENST00000561243 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
ACAN-208ENST00000561243 CENPBP07199 599 aaPredicted RBP17.18■□□□□ 0.34
ACAN-208ENST00000561243 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
ACAN-208ENST00000561243 CCER1Q8TC90 406 aaPredicted RBP17.1■□□□□ 0.33
ACAN-208ENST00000561243 ZEB1P37275 1124 aaPredicted RBP17.06■□□□□ 0.32
ACAN-208ENST00000561243 ATP1B4Q9UN42 357 aaPredicted RBP17■□□□□ 0.31
ACAN-208ENST00000561243 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
ACAN-208ENST00000561243 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
ACAN-208ENST00000561243 NEFLP07196 543 aa16.85■□□□□ 0.29
ACAN-208ENST00000561243 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
ACAN-208ENST00000561243 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
ACAN-208ENST00000561243 MYT1Q01538 1121 aa16.68■□□□□ 0.26
ACAN-208ENST00000561243 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.23
ACAN-208ENST00000561243 DAXXQ9UER7 740 aaPredicted RBP16.45■□□□□ 0.22
ACAN-208ENST00000561243 ITGAEP38570 1179 aa16.43■□□□□ 0.22
ACAN-208ENST00000561243 POLR3GLQ9BT43 218 aa16.43■□□□□ 0.22
ACAN-208ENST00000561243 HRCP23327 699 aa16.41■□□□□ 0.22
ACAN-208ENST00000561243 CNGB1Q14028 1251 aaPredicted RBP16.32■□□□□ 0.2
ACAN-208ENST00000561243 MYT1LQ9UL68 1186 aa16.32■□□□□ 0.2
ACAN-208ENST00000561243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
ACAN-208ENST00000561243 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
ACAN-208ENST00000561243 LOC105371045A0A1W2PR82 267 aa16.28■□□□□ 0.2
ACAN-208ENST00000561243 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
ACAN-208ENST00000561243 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
ACAN-208ENST00000561243 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.17
ACAN-208ENST00000561243 ZNF316A6NFI3 1004 aaPredicted RBP16.07■□□□□ 0.16
ACAN-208ENST00000561243 RTL5Q5HYW3 569 aaPredicted RBP16.06■□□□□ 0.16
ACAN-208ENST00000561243 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
ACAN-208ENST00000561243 FAM50AQ14320 339 aaKnown RBP15.95■□□□□ 0.14
ACAN-208ENST00000561243 BCANQ96GW7 911 aa15.9■□□□□ 0.14
ACAN-208ENST00000561243 NEUROD1Q13562 356 aa15.89■□□□□ 0.13
ACAN-208ENST00000561243 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
ACAN-208ENST00000561243 GTF3C3Q9Y5Q9 886 aa15.83■□□□□ 0.12
ACAN-208ENST00000561243 ANP32CO43423 234 aa15.76■□□□□ 0.11
ACAN-208ENST00000561243 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
ACAN-208ENST00000561243 ZNF326Q5BKZ1 582 aaKnown RBP15.75■□□□□ 0.11
ACAN-208ENST00000561243 ZBTB47Q9UFB7 747 aaPredicted RBP15.67■□□□□ 0.1
ACAN-208ENST00000561243 BCL11AQ9H165 835 aa15.66■□□□□ 0.1
ACAN-208ENST00000561243 CANXP27824 592 aaKnown RBP15.62■□□□□ 0.09
ACAN-208ENST00000561243 SLC24A1O60721 1099 aa15.59■□□□□ 0.09
ACAN-208ENST00000561243 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
ACAN-208ENST00000561243 ACIN1Q9UKV3 1341 aaKnown RBP15.51■□□□□ 0.07
ACAN-208ENST00000561243 ANP32AP39687 249 aaKnown RBP15.5■□□□□ 0.07
ACAN-208ENST00000561243 FBLN2P98095 1184 aa15.5■□□□□ 0.07
ACAN-208ENST00000561243 NPM2Q86SE8 214 aaKnown RBP15.49■□□□□ 0.07
ACAN-208ENST00000561243 ABCC9O60706 1549 aa15.46■□□□□ 0.07
ACAN-208ENST00000561243 NEFMP07197 916 aa15.46■□□□□ 0.07
ACAN-208ENST00000561243 ARID3CA6NKF2 412 aa15.45■□□□□ 0.06
ACAN-208ENST00000561243 P3H3Q8IVL6 736 aa15.45■□□□□ 0.06
ACAN-208ENST00000561243 FKBP8Q14318 412 aa15.37■□□□□ 0.05
ACAN-208ENST00000561243 ZNF777Q9ULD5 760 aaPredicted RBP15.36■□□□□ 0.05
ACAN-208ENST00000561243 EIF5BO60841 1220 aaKnown RBP15.32■□□□□ 0.04
ACAN-208ENST00000561243 HSP90AA1P07900 732 aaKnown RBP15.29■□□□□ 0.04
ACAN-208ENST00000561243 ANP32BQ92688 251 aaKnown RBP15.29■□□□□ 0.04
ACAN-208ENST00000561243 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
ACAN-208ENST00000561243 HNRNPUQ00839 825 aaKnown RBP eCLIP15.27■□□□□ 0.04
ACAN-208ENST00000561243 FAM9BQ8IZU0 186 aa15.26■□□□□ 0.03
ACAN-208ENST00000561243 TONSLQ96HA7 1378 aa15.25■□□□□ 0.03
ACAN-208ENST00000561243 SALL2Q9Y467 1007 aaPredicted RBP15.23■□□□□ 0.03
ACAN-208ENST00000561243 DDX10Q13206 875 aaKnown RBP15.23■□□□□ 0.03
ACAN-208ENST00000561243 UPF2Q9HAU5 1272 aaKnown RBP15.22■□□□□ 0.03
ACAN-208ENST00000561243 NBR1Q14596 966 aa15.19■□□□□ 0.02
ACAN-208ENST00000561243 CHGAP10645 457 aaKnown RBP15.19■□□□□ 0.02
ACAN-208ENST00000561243 CCDC136Q96JN2 1154 aa15.14■□□□□ 0.01
ACAN-208ENST00000561243 ARXQ96QS3 562 aa15.14■□□□□ 0.01
ACAN-208ENST00000561243 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
ACAN-208ENST00000561243 ESF1Q9H501 851 aaKnown RBP15.12■□□□□ 0.01
ACAN-208ENST00000561243 TMC1Q8TDI8 760 aa15.11■□□□□ 0.01
ACAN-208ENST00000561243 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
ACAN-208ENST00000561243 CHIC2Q9UKJ5 165 aa15.07■□□□□ 0
ACAN-208ENST00000561243 DCAF1Q9Y4B6 1507 aa15.07■□□□□ 0
ACAN-208ENST00000561243 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.07■□□□□ 0
ACAN-208ENST00000561243 IRX6P78412 446 aaPredicted RBP15.06■□□□□ 0
ACAN-208ENST00000561243 SCRIBQ14160 1630 aa15.06■□□□□ 0
ACAN-208ENST00000561243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ 0
ACAN-208ENST00000561243 GLIPR1L2Q4G1C9 344 aa15.05■□□□□ -0
ACAN-208ENST00000561243 WDR43Q15061 677 aaKnown RBP eCLIP15.05■□□□□ -0
ACAN-208ENST00000561243 MRS2Q9HD23 443 aa15.03■□□□□ -0
ACAN-208ENST00000561243 KDM2AQ9Y2K7 1162 aa15.02□□□□□ -0.01
ACAN-208ENST00000561243 HIRIP3Q9BW71 556 aaPredicted RBP15□□□□□ -0.01
ACAN-208ENST00000561243 MIER1Q8N108 512 aa14.99□□□□□ -0.01
ACAN-208ENST00000561243 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
ACAN-208ENST00000561243 MYH16Q9H6N6 1097 aa14.91□□□□□ -0.02
ACAN-208ENST00000561243 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
ACAN-208ENST00000561243 MTUS2Q5JR59 1369 aa14.88□□□□□ -0.03
ACAN-208ENST00000561243 TSPY4P0CV99 314 aa14.87□□□□□ -0.03
ACAN-208ENST00000561243 TSPY10P0CW01 314 aa14.87□□□□□ -0.03
ACAN-208ENST00000561243 SENP3Q9H4L4 574 aaPredicted RBP14.86□□□□□ -0.03
ACAN-208ENST00000561243 EIF4G2P78344 907 aaKnown RBP eCLIP14.85□□□□□ -0.03
ACAN-208ENST00000561243 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 1020.2 ms