RNA–Protein interactions for RNA: ENST00000560865.1

AC108449.2-201, humanhuman

TSL 3 BASIC

Gene AC108449.2, Length 552 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC108449.2-201ENST00000560865 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
AC108449.2-201ENST00000560865 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
AC108449.2-201ENST00000560865 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
AC108449.2-201ENST00000560865 SENP3Q9H4L4 574 aaPredicted RBP21.63■■□□□ 1.05
AC108449.2-201ENST00000560865 PLPPR3Q6T4P5 718 aa20.55■□□□□ 0.88
AC108449.2-201ENST00000560865 FOXD1Q16676 465 aa19.96■□□□□ 0.79
AC108449.2-201ENST00000560865 ADRA2BP18089 450 aa19.37■□□□□ 0.69
AC108449.2-201ENST00000560865 PPP6R1Q9UPN7 881 aa19.35■□□□□ 0.69
AC108449.2-201ENST00000560865 PIAS4Q8N2W9 510 aaPredicted RBP18.94■□□□□ 0.62
AC108449.2-201ENST00000560865 MSH5O43196 834 aa18.41■□□□□ 0.54
AC108449.2-201ENST00000560865 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
AC108449.2-201ENST00000560865 KCNA4P22459 653 aa17.93■□□□□ 0.46
AC108449.2-201ENST00000560865 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
AC108449.2-201ENST00000560865 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
AC108449.2-201ENST00000560865 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
AC108449.2-201ENST00000560865 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
AC108449.2-201ENST00000560865 NPM3O75607 178 aaKnown RBP17.42■□□□□ 0.38
AC108449.2-201ENST00000560865 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
AC108449.2-201ENST00000560865 SLC4A1APQ9BWU0 796 aaKnown RBP17.16■□□□□ 0.34
AC108449.2-201ENST00000560865 RNF216Q9NWF9 866 aaPredicted RBP17.16■□□□□ 0.34
AC108449.2-201ENST00000560865 HOXD11P31277 338 aaPredicted RBP17.02■□□□□ 0.32
AC108449.2-201ENST00000560865 DNAJC5BQ9UF47 199 aa16.96■□□□□ 0.31
AC108449.2-201ENST00000560865 EHMT2Q96KQ7 1210 aa16.91■□□□□ 0.3
AC108449.2-201ENST00000560865 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
AC108449.2-201ENST00000560865 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
AC108449.2-201ENST00000560865 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
AC108449.2-201ENST00000560865 ZBTB22O15209 634 aa16.47■□□□□ 0.23
AC108449.2-201ENST00000560865 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
AC108449.2-201ENST00000560865 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
AC108449.2-201ENST00000560865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.19
AC108449.2-201ENST00000560865 MYCNP04198 464 aaPredicted RBP16.16■□□□□ 0.18
AC108449.2-201ENST00000560865 U3KPZ7 1027 aaPredicted RBP15.96■□□□□ 0.15
AC108449.2-201ENST00000560865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
AC108449.2-201ENST00000560865 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
AC108449.2-201ENST00000560865 ATXN8OSP0DMR3 200 aa15.93■□□□□ 0.14
AC108449.2-201ENST00000560865 SAMD1Q6SPF0 538 aaPredicted RBP15.88■□□□□ 0.13
AC108449.2-201ENST00000560865 APLP2Q06481 763 aa15.76■□□□□ 0.11
AC108449.2-201ENST00000560865 RNF39Q9H2S5 420 aa15.75■□□□□ 0.11
AC108449.2-201ENST00000560865 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
AC108449.2-201ENST00000560865 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
AC108449.2-201ENST00000560865 ZNF219Q9P2Y4 722 aaPredicted RBP15.44■□□□□ 0.06
AC108449.2-201ENST00000560865 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
AC108449.2-201ENST00000560865 CAPN15O75808 1086 aa15.39■□□□□ 0.05
AC108449.2-201ENST00000560865 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
AC108449.2-201ENST00000560865 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
AC108449.2-201ENST00000560865 POLA2Q14181 598 aa15.16■□□□□ 0.02
AC108449.2-201ENST00000560865 ABCB7O75027 752 aa15.08■□□□□ 0
AC108449.2-201ENST00000560865 DSG3P32926 999 aa15.06■□□□□ 0
AC108449.2-201ENST00000560865 FBLN2P98095 1184 aa15.05■□□□□ -0
AC108449.2-201ENST00000560865 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
AC108449.2-201ENST00000560865 FKBP8Q14318 412 aa15.02■□□□□ -0
AC108449.2-201ENST00000560865 MKRN4PQ13434 485 aaPredicted RBP14.95□□□□□ -0.02
AC108449.2-201ENST00000560865 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
AC108449.2-201ENST00000560865 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
AC108449.2-201ENST00000560865 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
AC108449.2-201ENST00000560865 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
AC108449.2-201ENST00000560865 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
AC108449.2-201ENST00000560865 PROM2Q8N271 834 aa14.59□□□□□ -0.07
AC108449.2-201ENST00000560865 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
AC108449.2-201ENST00000560865 FBXO3Q9UK99 471 aa14.5□□□□□ -0.09
AC108449.2-201ENST00000560865 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
AC108449.2-201ENST00000560865 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
AC108449.2-201ENST00000560865 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
AC108449.2-201ENST00000560865 SLC24A1O60721 1099 aa14.28□□□□□ -0.12
AC108449.2-201ENST00000560865 AKT1S1Q96B36 256 aa14.27□□□□□ -0.13
AC108449.2-201ENST00000560865 VASPP50552 380 aaPredicted RBP14.25□□□□□ -0.13
AC108449.2-201ENST00000560865 STAG3Q9UJ98 1225 aa14.24□□□□□ -0.13
AC108449.2-201ENST00000560865 AMER1Q5JTC6 1135 aaPredicted RBP14.19□□□□□ -0.14
AC108449.2-201ENST00000560865 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
AC108449.2-201ENST00000560865 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
AC108449.2-201ENST00000560865 RTN4Q9NQC3 1192 aaKnown RBP14.06□□□□□ -0.16
AC108449.2-201ENST00000560865 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
AC108449.2-201ENST00000560865 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
AC108449.2-201ENST00000560865 PLEKHG5O94827 1062 aa14□□□□□ -0.17
AC108449.2-201ENST00000560865 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
AC108449.2-201ENST00000560865 MIER1Q8N108 512 aa13.98□□□□□ -0.17
AC108449.2-201ENST00000560865 KLHL34Q8N239 644 aa13.94□□□□□ -0.18
AC108449.2-201ENST00000560865 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
AC108449.2-201ENST00000560865 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
AC108449.2-201ENST00000560865 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
AC108449.2-201ENST00000560865 SPOCK2Q92563 424 aa13.87□□□□□ -0.19
AC108449.2-201ENST00000560865 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
AC108449.2-201ENST00000560865 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
AC108449.2-201ENST00000560865 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
AC108449.2-201ENST00000560865 PKD2Q13563 968 aa13.65□□□□□ -0.22
AC108449.2-201ENST00000560865 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
AC108449.2-201ENST00000560865 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
AC108449.2-201ENST00000560865 NUBP1P53384 320 aa13.59□□□□□ -0.23
AC108449.2-201ENST00000560865 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
AC108449.2-201ENST00000560865 CIZ1Q9ULV3 898 aaPredicted RBP13.59□□□□□ -0.23
AC108449.2-201ENST00000560865 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
AC108449.2-201ENST00000560865 GSE1Q14687 1217 aa13.58□□□□□ -0.24
AC108449.2-201ENST00000560865 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
AC108449.2-201ENST00000560865 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
AC108449.2-201ENST00000560865 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
AC108449.2-201ENST00000560865 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
AC108449.2-201ENST00000560865 PIP4P2Q8N4L2 257 aa13.52□□□□□ -0.25
AC108449.2-201ENST00000560865 DCAF8Q5TAQ9 597 aa13.49□□□□□ -0.25
AC108449.2-201ENST00000560865 RASEFQ8IZ41 740 aa13.48□□□□□ -0.25
AC108449.2-201ENST00000560865 NISCHQ9Y2I1 1504 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms