RNA–Protein interactions for RNA: ENST00000560431.2

AC090515.3-201, humanhuman

BASIC

Gene AC090515.3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090515.3-201ENST00000560431 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
AC090515.3-201ENST00000560431 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
AC090515.3-201ENST00000560431 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
AC090515.3-201ENST00000560431 PHF23Q9BUL5 403 aaPredicted RBP19.92■□□□□ 0.78
AC090515.3-201ENST00000560431 FOXD1Q16676 465 aa18.83■□□□□ 0.6
AC090515.3-201ENST00000560431 MSH5O43196 834 aa17.8■□□□□ 0.44
AC090515.3-201ENST00000560431 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.44
AC090515.3-201ENST00000560431 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
AC090515.3-201ENST00000560431 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
AC090515.3-201ENST00000560431 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
AC090515.3-201ENST00000560431 ADRA2BP18089 450 aa17.36■□□□□ 0.37
AC090515.3-201ENST00000560431 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
AC090515.3-201ENST00000560431 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
AC090515.3-201ENST00000560431 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
AC090515.3-201ENST00000560431 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
AC090515.3-201ENST00000560431 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
AC090515.3-201ENST00000560431 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
AC090515.3-201ENST00000560431 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
AC090515.3-201ENST00000560431 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
AC090515.3-201ENST00000560431 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
AC090515.3-201ENST00000560431 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
AC090515.3-201ENST00000560431 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
AC090515.3-201ENST00000560431 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
AC090515.3-201ENST00000560431 C1QBPQ07021 282 aaKnown RBP14.93□□□□□ -0.02
AC090515.3-201ENST00000560431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.64□□□□□ -0.07
AC090515.3-201ENST00000560431 NPM3O75607 178 aaKnown RBP14.62□□□□□ -0.07
AC090515.3-201ENST00000560431 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
AC090515.3-201ENST00000560431 KCNA4P22459 653 aa14.15□□□□□ -0.14
AC090515.3-201ENST00000560431 CAPN15O75808 1086 aa14.13□□□□□ -0.15
AC090515.3-201ENST00000560431 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
AC090515.3-201ENST00000560431 DSG3P32926 999 aa14.07□□□□□ -0.16
AC090515.3-201ENST00000560431 APLP2Q06481 763 aa14.01□□□□□ -0.17
AC090515.3-201ENST00000560431 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
AC090515.3-201ENST00000560431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.92□□□□□ -0.18
AC090515.3-201ENST00000560431 HNRNPUL2Q1KMD3 747 aaKnown RBP13.92□□□□□ -0.18
AC090515.3-201ENST00000560431 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
AC090515.3-201ENST00000560431 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
AC090515.3-201ENST00000560431 SAMD1Q6SPF0 538 aaPredicted RBP13.8□□□□□ -0.2
AC090515.3-201ENST00000560431 POTEHQ6S545 545 aa13.78□□□□□ -0.2
AC090515.3-201ENST00000560431 ABCB7O75027 752 aa13.74□□□□□ -0.21
AC090515.3-201ENST00000560431 MYCNP04198 464 aaPredicted RBP13.59□□□□□ -0.23
AC090515.3-201ENST00000560431 RBM42Q9BTD8 480 aaKnown RBP13.54□□□□□ -0.24
AC090515.3-201ENST00000560431 POLA2Q14181 598 aa13.44□□□□□ -0.26
AC090515.3-201ENST00000560431 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
AC090515.3-201ENST00000560431 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.28
AC090515.3-201ENST00000560431 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
AC090515.3-201ENST00000560431 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
AC090515.3-201ENST00000560431 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
AC090515.3-201ENST00000560431 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
AC090515.3-201ENST00000560431 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
AC090515.3-201ENST00000560431 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
AC090515.3-201ENST00000560431 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
AC090515.3-201ENST00000560431 ZBTB22O15209 634 aa12.96□□□□□ -0.33
AC090515.3-201ENST00000560431 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
AC090515.3-201ENST00000560431 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
AC090515.3-201ENST00000560431 PITPNM1O00562 1244 aa12.82□□□□□ -0.36
AC090515.3-201ENST00000560431 FBLN2P98095 1184 aa12.82□□□□□ -0.36
AC090515.3-201ENST00000560431 SPDYE2BA6NHP3 402 aa12.78□□□□□ -0.36
AC090515.3-201ENST00000560431 SPDYE6P0CI01 402 aa12.78□□□□□ -0.36
AC090515.3-201ENST00000560431 SPDYE2Q495Y8 402 aa12.78□□□□□ -0.36
AC090515.3-201ENST00000560431 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
AC090515.3-201ENST00000560431 HAX1O00165 279 aa12.71□□□□□ -0.37
AC090515.3-201ENST00000560431 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
AC090515.3-201ENST00000560431 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
AC090515.3-201ENST00000560431 ZNF692Q9BU19 519 aaPredicted RBP12.57□□□□□ -0.4
AC090515.3-201ENST00000560431 CLEC11AQ9Y240 323 aa12.55□□□□□ -0.4
AC090515.3-201ENST00000560431 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
AC090515.3-201ENST00000560431 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
AC090515.3-201ENST00000560431 EVX2Q03828 476 aa12.44□□□□□ -0.42
AC090515.3-201ENST00000560431 C19orf67A6NJJ6 358 aa12.37□□□□□ -0.43
AC090515.3-201ENST00000560431 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
AC090515.3-201ENST00000560431 PRR29P0C7W0 189 aa12.35□□□□□ -0.43
AC090515.3-201ENST00000560431 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
AC090515.3-201ENST00000560431 CSRNP3Q8WYN3 585 aa12.23□□□□□ -0.45
AC090515.3-201ENST00000560431 GABBR2O75899 941 aa12.22□□□□□ -0.45
AC090515.3-201ENST00000560431 FARP1Q9Y4F1 1045 aaPredicted RBP12.14□□□□□ -0.47
AC090515.3-201ENST00000560431 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
AC090515.3-201ENST00000560431 CLCN6P51797 869 aa12.11□□□□□ -0.47
AC090515.3-201ENST00000560431 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
AC090515.3-201ENST00000560431 LHX8Q68G74 356 aa12.04□□□□□ -0.48
AC090515.3-201ENST00000560431 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
AC090515.3-201ENST00000560431 EHMT2Q96KQ7 1210 aa11.96□□□□□ -0.49
AC090515.3-201ENST00000560431 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
AC090515.3-201ENST00000560431 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
AC090515.3-201ENST00000560431 DCBLD2Q96PD2 775 aa11.91□□□□□ -0.5
AC090515.3-201ENST00000560431 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
AC090515.3-201ENST00000560431 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
AC090515.3-201ENST00000560431 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
AC090515.3-201ENST00000560431 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
AC090515.3-201ENST00000560431 GALR2O43603 387 aaPredicted RBP11.74□□□□□ -0.53
AC090515.3-201ENST00000560431 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
AC090515.3-201ENST00000560431 PHF12Q96QT6 1004 aa11.68□□□□□ -0.54
AC090515.3-201ENST00000560431 PROM2Q8N271 834 aa11.63□□□□□ -0.55
AC090515.3-201ENST00000560431 PLEKHG5O94827 1062 aa11.54□□□□□ -0.56
AC090515.3-201ENST00000560431 ASTLQ6HA08 431 aaPredicted RBP11.53□□□□□ -0.56
AC090515.3-201ENST00000560431 OTUD5Q96G74 571 aa11.53□□□□□ -0.56
AC090515.3-201ENST00000560431 MS4A3Q96HJ5 214 aa11.53□□□□□ -0.56
AC090515.3-201ENST00000560431 POTEB2H3BUK9 544 aa11.51□□□□□ -0.57
AC090515.3-201ENST00000560431 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
AC090515.3-201ENST00000560431 TSPYL2Q9H2G4 693 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms