RNA–Protein interactions for RNA: ENST00000560339.1

AC066612.1-201, humanhuman

TSL 3

Gene AC066612.1, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC066612.1-201ENST00000560339 AEBP2Q6ZN18 517 aaPredicted RBP21.35■■□□□ 1.01
AC066612.1-201ENST00000560339 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
AC066612.1-201ENST00000560339 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
AC066612.1-201ENST00000560339 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
AC066612.1-201ENST00000560339 FOXD1Q16676 465 aa17.01■□□□□ 0.31
AC066612.1-201ENST00000560339 PLPPR3Q6T4P5 718 aa16.18■□□□□ 0.18
AC066612.1-201ENST00000560339 MSH5O43196 834 aa15.98■□□□□ 0.15
AC066612.1-201ENST00000560339 PIAS4Q8N2W9 510 aaPredicted RBP15.93■□□□□ 0.14
AC066612.1-201ENST00000560339 PPP6R1Q9UPN7 881 aa15.84■□□□□ 0.13
AC066612.1-201ENST00000560339 ADRA2BP18089 450 aa15.82■□□□□ 0.12
AC066612.1-201ENST00000560339 POTEDQ86YR6 584 aa15.68■□□□□ 0.1
AC066612.1-201ENST00000560339 MAPK8IP2Q13387 824 aaPredicted RBP14.55□□□□□ -0.08
AC066612.1-201ENST00000560339 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.08
AC066612.1-201ENST00000560339 DMRT2Q9Y5R5 561 aa14.45□□□□□ -0.1
AC066612.1-201ENST00000560339 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
AC066612.1-201ENST00000560339 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
AC066612.1-201ENST00000560339 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
AC066612.1-201ENST00000560339 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
AC066612.1-201ENST00000560339 CACNB1Q02641 598 aaPredicted RBP13.79□□□□□ -0.2
AC066612.1-201ENST00000560339 RNF216Q9NWF9 866 aaPredicted RBP13.79□□□□□ -0.2
AC066612.1-201ENST00000560339 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
AC066612.1-201ENST00000560339 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
AC066612.1-201ENST00000560339 C1QBPQ07021 282 aaKnown RBP13.42□□□□□ -0.26
AC066612.1-201ENST00000560339 NPM3O75607 178 aaKnown RBP13.39□□□□□ -0.27
AC066612.1-201ENST00000560339 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
AC066612.1-201ENST00000560339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.28
AC066612.1-201ENST00000560339 KCNA4P22459 653 aa13.08□□□□□ -0.32
AC066612.1-201ENST00000560339 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
AC066612.1-201ENST00000560339 CAPN15O75808 1086 aa12.85□□□□□ -0.35
AC066612.1-201ENST00000560339 SPINK5Q9NQ38 1064 aaPredicted RBP12.82□□□□□ -0.36
AC066612.1-201ENST00000560339 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
AC066612.1-201ENST00000560339 DSG3P32926 999 aa12.72□□□□□ -0.37
AC066612.1-201ENST00000560339 APLP2Q06481 763 aa12.67□□□□□ -0.38
AC066612.1-201ENST00000560339 TRHP20396 242 aaPredicted RBP12.63□□□□□ -0.39
AC066612.1-201ENST00000560339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.62□□□□□ -0.39
AC066612.1-201ENST00000560339 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
AC066612.1-201ENST00000560339 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
AC066612.1-201ENST00000560339 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
AC066612.1-201ENST00000560339 ABCB7O75027 752 aa12.53□□□□□ -0.4
AC066612.1-201ENST00000560339 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
AC066612.1-201ENST00000560339 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
AC066612.1-201ENST00000560339 POTEHQ6S545 545 aa12.29□□□□□ -0.44
AC066612.1-201ENST00000560339 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
AC066612.1-201ENST00000560339 POLA2Q14181 598 aa12.24□□□□□ -0.45
AC066612.1-201ENST00000560339 RBM42Q9BTD8 480 aaKnown RBP12.19□□□□□ -0.46
AC066612.1-201ENST00000560339 ATF5Q9Y2D1 282 aaPredicted RBP12.09□□□□□ -0.47
AC066612.1-201ENST00000560339 ZBTB22O15209 634 aa11.99□□□□□ -0.49
AC066612.1-201ENST00000560339 ZBTB12Q9Y330 459 aaPredicted RBP11.99□□□□□ -0.49
AC066612.1-201ENST00000560339 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
AC066612.1-201ENST00000560339 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
AC066612.1-201ENST00000560339 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
AC066612.1-201ENST00000560339 ATXN8OSP0DMR3 200 aa11.85□□□□□ -0.51
AC066612.1-201ENST00000560339 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
AC066612.1-201ENST00000560339 FBLN2P98095 1184 aa11.7□□□□□ -0.54
AC066612.1-201ENST00000560339 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
AC066612.1-201ENST00000560339 PIP4P2Q8N4L2 257 aa11.61□□□□□ -0.55
AC066612.1-201ENST00000560339 SPDYE2BA6NHP3 402 aa11.6□□□□□ -0.55
AC066612.1-201ENST00000560339 SPDYE6P0CI01 402 aa11.6□□□□□ -0.55
AC066612.1-201ENST00000560339 SPDYE2Q495Y8 402 aa11.6□□□□□ -0.55
AC066612.1-201ENST00000560339 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.57
AC066612.1-201ENST00000560339 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.57
AC066612.1-201ENST00000560339 SP7Q8TDD2 431 aaPredicted RBP11.49□□□□□ -0.57
AC066612.1-201ENST00000560339 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
AC066612.1-201ENST00000560339 HAX1O00165 279 aa11.48□□□□□ -0.57
AC066612.1-201ENST00000560339 CLEC11AQ9Y240 323 aa11.47□□□□□ -0.57
AC066612.1-201ENST00000560339 SPDYE1Q8NFV5 336 aaPredicted RBP11.43□□□□□ -0.58
AC066612.1-201ENST00000560339 CSRNP3Q8WYN3 585 aa11.41□□□□□ -0.58
AC066612.1-201ENST00000560339 SSUH2Q9Y2M2 353 aa11.4□□□□□ -0.58
AC066612.1-201ENST00000560339 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
AC066612.1-201ENST00000560339 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
AC066612.1-201ENST00000560339 EHMT2Q96KQ7 1210 aa11.3□□□□□ -0.6
AC066612.1-201ENST00000560339 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
AC066612.1-201ENST00000560339 EVX2Q03828 476 aa11.25□□□□□ -0.61
AC066612.1-201ENST00000560339 CHADLQ6NUI6 762 aa11.22□□□□□ -0.61
AC066612.1-201ENST00000560339 C19orf67A6NJJ6 358 aa11.15□□□□□ -0.62
AC066612.1-201ENST00000560339 GABBR2O75899 941 aa11.02□□□□□ -0.65
AC066612.1-201ENST00000560339 FARP1Q9Y4F1 1045 aaPredicted RBP11.02□□□□□ -0.65
AC066612.1-201ENST00000560339 SPDYE4A6NLX3 237 aa11.01□□□□□ -0.65
AC066612.1-201ENST00000560339 CD44P16070 742 aaKnown RBP10.99□□□□□ -0.65
AC066612.1-201ENST00000560339 STAG3Q9UJ98 1225 aa10.99□□□□□ -0.65
AC066612.1-201ENST00000560339 CREBZFQ9NS37 354 aa10.89□□□□□ -0.67
AC066612.1-201ENST00000560339 ZRANB1Q9UGI0 708 aa10.84□□□□□ -0.67
AC066612.1-201ENST00000560339 CLCN6P51797 869 aa10.83□□□□□ -0.68
AC066612.1-201ENST00000560339 LHX8Q68G74 356 aa10.8□□□□□ -0.68
AC066612.1-201ENST00000560339 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
AC066612.1-201ENST00000560339 PAK3O75914 559 aaPredicted RBP10.77□□□□□ -0.69
AC066612.1-201ENST00000560339 DCBLD2Q96PD2 775 aa10.77□□□□□ -0.69
AC066612.1-201ENST00000560339 NPM1P06748 294 aaKnown RBP eCLIP10.75□□□□□ -0.69
AC066612.1-201ENST00000560339 POTEIP0CG38 1075 aa10.75□□□□□ -0.69
AC066612.1-201ENST00000560339 GALR2O43603 387 aaPredicted RBP10.67□□□□□ -0.7
AC066612.1-201ENST00000560339 MNX1P50219 401 aaPredicted RBP10.66□□□□□ -0.7
AC066612.1-201ENST00000560339 PHF12Q96QT6 1004 aa10.66□□□□□ -0.7
AC066612.1-201ENST00000560339 PROM2Q8N271 834 aa10.64□□□□□ -0.71
AC066612.1-201ENST00000560339 PLEKHG5O94827 1062 aa10.57□□□□□ -0.72
AC066612.1-201ENST00000560339 TSPYL2Q9H2G4 693 aaPredicted RBP10.57□□□□□ -0.72
AC066612.1-201ENST00000560339 MIER1Q8N108 512 aa10.54□□□□□ -0.72
AC066612.1-201ENST00000560339 MS4A3Q96HJ5 214 aa10.51□□□□□ -0.73
AC066612.1-201ENST00000560339 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
AC066612.1-201ENST00000560339 CCDC61Q9Y6R9 512 aa10.45□□□□□ -0.74
AC066612.1-201ENST00000560339 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms