RNA–Protein interactions for RNA: ENST00000560159.1

AC012170.3-201, humanhuman

TSL 2 BASIC

Gene AC012170.3, Length 297 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012170.3-201ENST00000560159 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
AC012170.3-201ENST00000560159 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
AC012170.3-201ENST00000560159 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
AC012170.3-201ENST00000560159 SENP3Q9H4L4 574 aaPredicted RBP19.84■□□□□ 0.77
AC012170.3-201ENST00000560159 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
AC012170.3-201ENST00000560159 FOXD1Q16676 465 aa18.47■□□□□ 0.55
AC012170.3-201ENST00000560159 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
AC012170.3-201ENST00000560159 ADRA2BP18089 450 aa17.98■□□□□ 0.47
AC012170.3-201ENST00000560159 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
AC012170.3-201ENST00000560159 MSH5O43196 834 aa16.83■□□□□ 0.28
AC012170.3-201ENST00000560159 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
AC012170.3-201ENST00000560159 KCNA4P22459 653 aa16.63■□□□□ 0.25
AC012170.3-201ENST00000560159 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
AC012170.3-201ENST00000560159 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
AC012170.3-201ENST00000560159 NCBP3Q53F19 620 aaKnown RBP16.26■□□□□ 0.19
AC012170.3-201ENST00000560159 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
AC012170.3-201ENST00000560159 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
AC012170.3-201ENST00000560159 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
AC012170.3-201ENST00000560159 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.12
AC012170.3-201ENST00000560159 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
AC012170.3-201ENST00000560159 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
AC012170.3-201ENST00000560159 HOXD11P31277 338 aaPredicted RBP15.67■□□□□ 0.1
AC012170.3-201ENST00000560159 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
AC012170.3-201ENST00000560159 CSRNP3Q8WYN3 585 aa15.41■□□□□ 0.06
AC012170.3-201ENST00000560159 ZBTB22O15209 634 aa15.35■□□□□ 0.05
AC012170.3-201ENST00000560159 DCAF8L1A6NGE4 600 aa15.22■□□□□ 0.03
AC012170.3-201ENST00000560159 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
AC012170.3-201ENST00000560159 FOXD4L1Q9NU39 408 aa15.17■□□□□ 0.02
AC012170.3-201ENST00000560159 POTEDQ86YR6 584 aa15□□□□□ -0.01
AC012170.3-201ENST00000560159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.02
AC012170.3-201ENST00000560159 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
AC012170.3-201ENST00000560159 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
AC012170.3-201ENST00000560159 ATXN8OSP0DMR3 200 aa14.57□□□□□ -0.08
AC012170.3-201ENST00000560159 ATF5Q9Y2D1 282 aaPredicted RBP14.53□□□□□ -0.08
AC012170.3-201ENST00000560159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
AC012170.3-201ENST00000560159 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
AC012170.3-201ENST00000560159 SAMD1Q6SPF0 538 aaPredicted RBP14.51□□□□□ -0.09
AC012170.3-201ENST00000560159 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
AC012170.3-201ENST00000560159 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
AC012170.3-201ENST00000560159 C1QBPQ07021 282 aaKnown RBP14.29□□□□□ -0.12
AC012170.3-201ENST00000560159 APLP2Q06481 763 aa14.28□□□□□ -0.12
AC012170.3-201ENST00000560159 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
AC012170.3-201ENST00000560159 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
AC012170.3-201ENST00000560159 CAPN15O75808 1086 aa14.17□□□□□ -0.14
AC012170.3-201ENST00000560159 POLA2Q14181 598 aa14□□□□□ -0.17
AC012170.3-201ENST00000560159 ABCB7O75027 752 aa13.98□□□□□ -0.17
AC012170.3-201ENST00000560159 CACNB1Q02641 598 aaPredicted RBP13.95□□□□□ -0.18
AC012170.3-201ENST00000560159 DSG3P32926 999 aa13.89□□□□□ -0.19
AC012170.3-201ENST00000560159 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
AC012170.3-201ENST00000560159 FKBP8Q14318 412 aa13.89□□□□□ -0.19
AC012170.3-201ENST00000560159 FBLN2P98095 1184 aa13.77□□□□□ -0.21
AC012170.3-201ENST00000560159 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
AC012170.3-201ENST00000560159 SPDYE4A6NLX3 237 aa13.63□□□□□ -0.23
AC012170.3-201ENST00000560159 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
AC012170.3-201ENST00000560159 PROM2Q8N271 834 aa13.45□□□□□ -0.26
AC012170.3-201ENST00000560159 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
AC012170.3-201ENST00000560159 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
AC012170.3-201ENST00000560159 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
AC012170.3-201ENST00000560159 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
AC012170.3-201ENST00000560159 SSUH2Q9Y2M2 353 aa13.34□□□□□ -0.27
AC012170.3-201ENST00000560159 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
AC012170.3-201ENST00000560159 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
AC012170.3-201ENST00000560159 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
AC012170.3-201ENST00000560159 VASPP50552 380 aaPredicted RBP13.13□□□□□ -0.31
AC012170.3-201ENST00000560159 RTN4Q9NQC3 1192 aaKnown RBP13.08□□□□□ -0.32
AC012170.3-201ENST00000560159 AKT1S1Q96B36 256 aa13.07□□□□□ -0.32
AC012170.3-201ENST00000560159 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
AC012170.3-201ENST00000560159 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
AC012170.3-201ENST00000560159 STAG3Q9UJ98 1225 aa13□□□□□ -0.33
AC012170.3-201ENST00000560159 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
AC012170.3-201ENST00000560159 SPDYE1Q8NFV5 336 aaPredicted RBP12.93□□□□□ -0.34
AC012170.3-201ENST00000560159 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
AC012170.3-201ENST00000560159 MIER1Q8N108 512 aa12.89□□□□□ -0.35
AC012170.3-201ENST00000560159 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
AC012170.3-201ENST00000560159 PITPNM1O00562 1244 aa12.86□□□□□ -0.35
AC012170.3-201ENST00000560159 KLHL34Q8N239 644 aa12.83□□□□□ -0.36
AC012170.3-201ENST00000560159 PRR29P0C7W0 189 aa12.8□□□□□ -0.36
AC012170.3-201ENST00000560159 SPOCK2Q92563 424 aa12.75□□□□□ -0.37
AC012170.3-201ENST00000560159 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
AC012170.3-201ENST00000560159 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
AC012170.3-201ENST00000560159 PKD2Q13563 968 aa12.66□□□□□ -0.38
AC012170.3-201ENST00000560159 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
AC012170.3-201ENST00000560159 MNX1P50219 401 aaPredicted RBP12.64□□□□□ -0.39
AC012170.3-201ENST00000560159 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
AC012170.3-201ENST00000560159 NUBP1P53384 320 aa12.57□□□□□ -0.4
AC012170.3-201ENST00000560159 CHRDL2Q6WN34 429 aa12.57□□□□□ -0.4
AC012170.3-201ENST00000560159 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
AC012170.3-201ENST00000560159 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
AC012170.3-201ENST00000560159 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
AC012170.3-201ENST00000560159 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
AC012170.3-201ENST00000560159 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
AC012170.3-201ENST00000560159 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
AC012170.3-201ENST00000560159 FARP1Q9Y4F1 1045 aaPredicted RBP12.47□□□□□ -0.41
AC012170.3-201ENST00000560159 NPM1P06748 294 aaKnown RBP eCLIP12.44□□□□□ -0.42
AC012170.3-201ENST00000560159 DCAF8Q5TAQ9 597 aa12.44□□□□□ -0.42
AC012170.3-201ENST00000560159 RGL2O15211 777 aa12.42□□□□□ -0.42
AC012170.3-201ENST00000560159 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
AC012170.3-201ENST00000560159 GSE1Q14687 1217 aa12.42□□□□□ -0.42
AC012170.3-201ENST00000560159 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
AC012170.3-201ENST00000560159 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms