RNA–Protein interactions for RNA: ENST00000560140.1

AC114546.1-201, humanhuman

TSL 3 BASIC

Gene AC114546.1, Length 473 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC114546.1-201ENST00000560140 AEBP2Q6ZN18 517 aaPredicted RBP26.02■■□□□ 1.76
AC114546.1-201ENST00000560140 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
AC114546.1-201ENST00000560140 PHF23Q9BUL5 403 aaPredicted RBP22.46■■□□□ 1.19
AC114546.1-201ENST00000560140 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
AC114546.1-201ENST00000560140 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
AC114546.1-201ENST00000560140 FOXD1Q16676 465 aa20.45■□□□□ 0.86
AC114546.1-201ENST00000560140 PPP6R1Q9UPN7 881 aa19.78■□□□□ 0.76
AC114546.1-201ENST00000560140 ADRA2BP18089 450 aa19.73■□□□□ 0.75
AC114546.1-201ENST00000560140 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
AC114546.1-201ENST00000560140 MSH5O43196 834 aa18.77■□□□□ 0.6
AC114546.1-201ENST00000560140 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
AC114546.1-201ENST00000560140 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
AC114546.1-201ENST00000560140 KCNA4P22459 653 aa17.99■□□□□ 0.47
AC114546.1-201ENST00000560140 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
AC114546.1-201ENST00000560140 NCBP3Q53F19 620 aaKnown RBP17.8■□□□□ 0.44
AC114546.1-201ENST00000560140 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
AC114546.1-201ENST00000560140 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
AC114546.1-201ENST00000560140 NPM3O75607 178 aaKnown RBP17.59■□□□□ 0.41
AC114546.1-201ENST00000560140 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
AC114546.1-201ENST00000560140 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
AC114546.1-201ENST00000560140 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
AC114546.1-201ENST00000560140 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
AC114546.1-201ENST00000560140 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
AC114546.1-201ENST00000560140 DCAF8L1A6NGE4 600 aa16.72■□□□□ 0.27
AC114546.1-201ENST00000560140 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
AC114546.1-201ENST00000560140 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
AC114546.1-201ENST00000560140 ZBTB22O15209 634 aa16.59■□□□□ 0.25
AC114546.1-201ENST00000560140 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
AC114546.1-201ENST00000560140 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
AC114546.1-201ENST00000560140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.22
AC114546.1-201ENST00000560140 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
AC114546.1-201ENST00000560140 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
AC114546.1-201ENST00000560140 RNF39Q9H2S5 420 aa16.13■□□□□ 0.17
AC114546.1-201ENST00000560140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
AC114546.1-201ENST00000560140 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
AC114546.1-201ENST00000560140 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
AC114546.1-201ENST00000560140 ATXN8OSP0DMR3 200 aa15.96■□□□□ 0.15
AC114546.1-201ENST00000560140 C1QBPQ07021 282 aaKnown RBP15.93■□□□□ 0.14
AC114546.1-201ENST00000560140 ATF5Q9Y2D1 282 aaPredicted RBP15.82■□□□□ 0.12
AC114546.1-201ENST00000560140 APLP2Q06481 763 aa15.79■□□□□ 0.12
AC114546.1-201ENST00000560140 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
AC114546.1-201ENST00000560140 CAPN15O75808 1086 aa15.59■□□□□ 0.09
AC114546.1-201ENST00000560140 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
AC114546.1-201ENST00000560140 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
AC114546.1-201ENST00000560140 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
AC114546.1-201ENST00000560140 DSG3P32926 999 aa15.38■□□□□ 0.05
AC114546.1-201ENST00000560140 POLA2Q14181 598 aa15.36■□□□□ 0.05
AC114546.1-201ENST00000560140 ABCB7O75027 752 aa15.32■□□□□ 0.04
AC114546.1-201ENST00000560140 MKRN4PQ13434 485 aaPredicted RBP15.15■□□□□ 0.02
AC114546.1-201ENST00000560140 ZBTB12Q9Y330 459 aaPredicted RBP15.11■□□□□ 0.01
AC114546.1-201ENST00000560140 FBLN2P98095 1184 aa15.07■□□□□ 0
AC114546.1-201ENST00000560140 FKBP8Q14318 412 aa14.91□□□□□ -0.02
AC114546.1-201ENST00000560140 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
AC114546.1-201ENST00000560140 SPDYE4A6NLX3 237 aa14.8□□□□□ -0.04
AC114546.1-201ENST00000560140 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
AC114546.1-201ENST00000560140 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
AC114546.1-201ENST00000560140 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
AC114546.1-201ENST00000560140 PROM2Q8N271 834 aa14.68□□□□□ -0.06
AC114546.1-201ENST00000560140 SSUH2Q9Y2M2 353 aa14.67□□□□□ -0.06
AC114546.1-201ENST00000560140 ZNF692Q9BU19 519 aaPredicted RBP14.65□□□□□ -0.06
AC114546.1-201ENST00000560140 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
AC114546.1-201ENST00000560140 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.09
AC114546.1-201ENST00000560140 AKT1S1Q96B36 256 aa14.48□□□□□ -0.09
AC114546.1-201ENST00000560140 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
AC114546.1-201ENST00000560140 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
AC114546.1-201ENST00000560140 STAG3Q9UJ98 1225 aa14.26□□□□□ -0.13
AC114546.1-201ENST00000560140 SPDYE1Q8NFV5 336 aaPredicted RBP14.25□□□□□ -0.13
AC114546.1-201ENST00000560140 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
AC114546.1-201ENST00000560140 VASPP50552 380 aaPredicted RBP14.18□□□□□ -0.14
AC114546.1-201ENST00000560140 CLEC11AQ9Y240 323 aa14.13□□□□□ -0.15
AC114546.1-201ENST00000560140 PRR29P0C7W0 189 aa14.04□□□□□ -0.16
AC114546.1-201ENST00000560140 IFNLR1Q8IU57 520 aaPredicted RBP14.01□□□□□ -0.17
AC114546.1-201ENST00000560140 MIER1Q8N108 512 aa13.99□□□□□ -0.17
AC114546.1-201ENST00000560140 CHRDL2Q6WN34 429 aa13.97□□□□□ -0.17
AC114546.1-201ENST00000560140 PLCD3Q8N3E9 789 aa13.97□□□□□ -0.17
AC114546.1-201ENST00000560140 CREBZFQ9NS37 354 aa13.96□□□□□ -0.17
AC114546.1-201ENST00000560140 FXR2P51116 673 aaKnown RBP eCLIP13.92□□□□□ -0.18
AC114546.1-201ENST00000560140 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
AC114546.1-201ENST00000560140 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
AC114546.1-201ENST00000560140 PIP4P2Q8N4L2 257 aa13.84□□□□□ -0.19
AC114546.1-201ENST00000560140 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
AC114546.1-201ENST00000560140 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
AC114546.1-201ENST00000560140 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
AC114546.1-201ENST00000560140 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
AC114546.1-201ENST00000560140 AMER1Q5JTC6 1135 aaPredicted RBP13.79□□□□□ -0.2
AC114546.1-201ENST00000560140 SPOCK2Q92563 424 aa13.79□□□□□ -0.2
AC114546.1-201ENST00000560140 RTN4Q9NQC3 1192 aaKnown RBP13.77□□□□□ -0.21
AC114546.1-201ENST00000560140 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
AC114546.1-201ENST00000560140 NUBP1P53384 320 aa13.7□□□□□ -0.22
AC114546.1-201ENST00000560140 NPM1P06748 294 aaKnown RBP eCLIP13.67□□□□□ -0.22
AC114546.1-201ENST00000560140 PKD2Q13563 968 aa13.6□□□□□ -0.23
AC114546.1-201ENST00000560140 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
AC114546.1-201ENST00000560140 GSE1Q14687 1217 aa13.53□□□□□ -0.24
AC114546.1-201ENST00000560140 FAM212AQ96EL1 285 aa13.52□□□□□ -0.25
AC114546.1-201ENST00000560140 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
AC114546.1-201ENST00000560140 DCAF8Q5TAQ9 597 aa13.49□□□□□ -0.25
AC114546.1-201ENST00000560140 TRIM41Q8WV44 630 aa13.44□□□□□ -0.26
AC114546.1-201ENST00000560140 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
AC114546.1-201ENST00000560140 C19orf67A6NJJ6 358 aa13.43□□□□□ -0.26
AC114546.1-201ENST00000560140 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms