RNA–Protein interactions for RNA: ENST00000560080.1

RNF111-209, Transcript of ring finger protein 111, humanhuman

TSL 3

Gene RNF111, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-209ENST00000560080 AEBP2Q6ZN18 517 aaPredicted RBP35.12■■■■□ 3.21
RNF111-209ENST00000560080 CHIC1Q5VXU3 224 aa33.42■■■□□ 2.94
RNF111-209ENST00000560080 SENP3Q9H4L4 574 aaPredicted RBP30.14■■■□□ 2.42
RNF111-209ENST00000560080 PHF23Q9BUL5 403 aaPredicted RBP29.68■■■□□ 2.34
RNF111-209ENST00000560080 FOXD1Q16676 465 aa27.99■■■□□ 2.07
RNF111-209ENST00000560080 PLPPR3Q6T4P5 718 aa26.76■■□□□ 1.87
RNF111-209ENST00000560080 MSH5O43196 834 aa26.34■■□□□ 1.81
RNF111-209ENST00000560080 PIAS4Q8N2W9 510 aaPredicted RBP26.21■■□□□ 1.79
RNF111-209ENST00000560080 PPP6R1Q9UPN7 881 aa26.09■■□□□ 1.77
RNF111-209ENST00000560080 ADRA2BP18089 450 aa26.04■■□□□ 1.76
RNF111-209ENST00000560080 POTEDQ86YR6 584 aa25.66■■□□□ 1.7
RNF111-209ENST00000560080 SCAF1Q9H7N4 1312 aaKnown RBP24.03■■□□□ 1.44
RNF111-209ENST00000560080 MAPK8IP2Q13387 824 aaPredicted RBP23.9■■□□□ 1.42
RNF111-209ENST00000560080 DMRT2Q9Y5R5 561 aa23.84■■□□□ 1.41
RNF111-209ENST00000560080 PPP4R3CPQ6ZMV5 832 aa23.39■■□□□ 1.33
RNF111-209ENST00000560080 CNKSR2Q8WXI2 1034 aa23.01■■□□□ 1.27
RNF111-209ENST00000560080 DCAF8L1A6NGE4 600 aa22.94■■□□□ 1.26
RNF111-209ENST00000560080 HOXD11P31277 338 aaPredicted RBP22.94■■□□□ 1.26
RNF111-209ENST00000560080 RNF216Q9NWF9 866 aaPredicted RBP22.8■■□□□ 1.24
RNF111-209ENST00000560080 CACNB1Q02641 598 aaPredicted RBP22.62■■□□□ 1.21
RNF111-209ENST00000560080 NCBP3Q53F19 620 aaKnown RBP22.61■■□□□ 1.21
RNF111-209ENST00000560080 RNF39Q9H2S5 420 aa22.39■■□□□ 1.17
RNF111-209ENST00000560080 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
RNF111-209ENST00000560080 C1QBPQ07021 282 aaKnown RBP22.14■■□□□ 1.13
RNF111-209ENST00000560080 NPM3O75607 178 aaKnown RBP22.13■■□□□ 1.13
RNF111-209ENST00000560080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.94■■□□□ 1.1
RNF111-209ENST00000560080 KCNA4P22459 653 aa21.65■■□□□ 1.06
RNF111-209ENST00000560080 U3KPZ7 1027 aaPredicted RBP21.37■■□□□ 1.01
RNF111-209ENST00000560080 CAPN15O75808 1086 aa21.13■□□□□ 0.97
RNF111-209ENST00000560080 SLC4A2P04920 1241 aa21.1■□□□□ 0.97
RNF111-209ENST00000560080 SPINK5Q9NQ38 1064 aaPredicted RBP21.06■□□□□ 0.96
RNF111-209ENST00000560080 APLP2Q06481 763 aa20.99■□□□□ 0.95
RNF111-209ENST00000560080 DSG3P32926 999 aa20.95■□□□□ 0.94
RNF111-209ENST00000560080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.93■□□□□ 0.94
RNF111-209ENST00000560080 HNRNPUL2Q1KMD3 747 aaKnown RBP20.93■□□□□ 0.94
RNF111-209ENST00000560080 ZNF219Q9P2Y4 722 aaPredicted RBP20.78■□□□□ 0.92
RNF111-209ENST00000560080 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
RNF111-209ENST00000560080 SAMD1Q6SPF0 538 aaPredicted RBP20.77■□□□□ 0.92
RNF111-209ENST00000560080 ABCB7O75027 752 aa20.57■□□□□ 0.88
RNF111-209ENST00000560080 MYCNP04198 464 aaPredicted RBP20.55■□□□□ 0.88
RNF111-209ENST00000560080 SLC4A1APQ9BWU0 796 aaKnown RBP20.5■□□□□ 0.87
RNF111-209ENST00000560080 FOXD4L1Q9NU39 408 aa20.3■□□□□ 0.84
RNF111-209ENST00000560080 POLA2Q14181 598 aa20.18■□□□□ 0.82
RNF111-209ENST00000560080 POTEHQ6S545 545 aa20.15■□□□□ 0.82
RNF111-209ENST00000560080 RBM42Q9BTD8 480 aaKnown RBP20.12■□□□□ 0.81
RNF111-209ENST00000560080 ATF5Q9Y2D1 282 aaPredicted RBP19.93■□□□□ 0.78
RNF111-209ENST00000560080 ZBTB12Q9Y330 459 aaPredicted RBP19.88■□□□□ 0.77
RNF111-209ENST00000560080 ZBTB22O15209 634 aa19.83■□□□□ 0.77
RNF111-209ENST00000560080 ATXN8OSP0DMR3 200 aa19.72■□□□□ 0.75
RNF111-209ENST00000560080 CHRDL2Q6WN34 429 aa19.61■□□□□ 0.73
RNF111-209ENST00000560080 AKT1S1Q96B36 256 aa19.6■□□□□ 0.73
RNF111-209ENST00000560080 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
RNF111-209ENST00000560080 FBLN2P98095 1184 aa19.36■□□□□ 0.69
RNF111-209ENST00000560080 REM2Q8IYK8 340 aaPredicted RBP19.36■□□□□ 0.69
RNF111-209ENST00000560080 SPDYE2BA6NHP3 402 aa19.2■□□□□ 0.66
RNF111-209ENST00000560080 SPDYE6P0CI01 402 aa19.2■□□□□ 0.66
RNF111-209ENST00000560080 SPDYE2Q495Y8 402 aa19.2■□□□□ 0.66
RNF111-209ENST00000560080 PITPNM1O00562 1244 aa19.13■□□□□ 0.65
RNF111-209ENST00000560080 PIP4P2Q8N4L2 257 aa19.1■□□□□ 0.65
RNF111-209ENST00000560080 MKRN4PQ13434 485 aaPredicted RBP19.03■□□□□ 0.64
RNF111-209ENST00000560080 FXR2P51116 673 aaKnown RBP eCLIP18.99■□□□□ 0.63
RNF111-209ENST00000560080 ZNF692Q9BU19 519 aaPredicted RBP18.97■□□□□ 0.63
RNF111-209ENST00000560080 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
RNF111-209ENST00000560080 SPDYE1Q8NFV5 336 aaPredicted RBP18.9■□□□□ 0.62
RNF111-209ENST00000560080 SP7Q8TDD2 431 aaPredicted RBP18.88■□□□□ 0.61
RNF111-209ENST00000560080 SSUH2Q9Y2M2 353 aa18.88■□□□□ 0.61
RNF111-209ENST00000560080 CLEC11AQ9Y240 323 aa18.85■□□□□ 0.61
RNF111-209ENST00000560080 HAX1O00165 279 aa18.84■□□□□ 0.61
RNF111-209ENST00000560080 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
RNF111-209ENST00000560080 PRKAR2AP13861 404 aaKnown RBP18.68■□□□□ 0.58
RNF111-209ENST00000560080 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
RNF111-209ENST00000560080 PRR29P0C7W0 189 aa18.55■□□□□ 0.56
RNF111-209ENST00000560080 EVX2Q03828 476 aa18.44■□□□□ 0.54
RNF111-209ENST00000560080 CHADLQ6NUI6 762 aa18.41■□□□□ 0.54
RNF111-209ENST00000560080 C19orf67A6NJJ6 358 aa18.38■□□□□ 0.53
RNF111-209ENST00000560080 STAG3Q9UJ98 1225 aa18.24■□□□□ 0.51
RNF111-209ENST00000560080 SPDYE4A6NLX3 237 aa18.22■□□□□ 0.51
RNF111-209ENST00000560080 FARP1Q9Y4F1 1045 aaPredicted RBP18.18■□□□□ 0.5
RNF111-209ENST00000560080 GABBR2O75899 941 aa18.13■□□□□ 0.49
RNF111-209ENST00000560080 CD44P16070 742 aaKnown RBP18.1■□□□□ 0.49
RNF111-209ENST00000560080 CLCN6P51797 869 aa17.98■□□□□ 0.47
RNF111-209ENST00000560080 CREBZFQ9NS37 354 aa17.98■□□□□ 0.47
RNF111-209ENST00000560080 ZRANB1Q9UGI0 708 aa17.84■□□□□ 0.45
RNF111-209ENST00000560080 PAK3O75914 559 aaPredicted RBP17.8■□□□□ 0.44
RNF111-209ENST00000560080 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
RNF111-209ENST00000560080 ZNF579Q8NAF0 562 aaKnown RBP17.8■□□□□ 0.44
RNF111-209ENST00000560080 LHX8Q68G74 356 aa17.72■□□□□ 0.43
RNF111-209ENST00000560080 DCBLD2Q96PD2 775 aa17.72■□□□□ 0.43
RNF111-209ENST00000560080 PROM2Q8N271 834 aa17.7■□□□□ 0.42
RNF111-209ENST00000560080 POTEIP0CG38 1075 aa17.66■□□□□ 0.42
RNF111-209ENST00000560080 MNX1P50219 401 aaPredicted RBP17.63■□□□□ 0.41
RNF111-209ENST00000560080 GALR2O43603 387 aaPredicted RBP17.54■□□□□ 0.4
RNF111-209ENST00000560080 PLEKHG5O94827 1062 aa17.54■□□□□ 0.4
RNF111-209ENST00000560080 PHF12Q96QT6 1004 aa17.52■□□□□ 0.4
RNF111-209ENST00000560080 MIER1Q8N108 512 aa17.43■□□□□ 0.38
RNF111-209ENST00000560080 TSPYL2Q9H2G4 693 aaPredicted RBP17.38■□□□□ 0.37
RNF111-209ENST00000560080 PLCD3Q8N3E9 789 aa17.31■□□□□ 0.36
RNF111-209ENST00000560080 MS4A3Q96HJ5 214 aa17.3■□□□□ 0.36
RNF111-209ENST00000560080 CCDC61Q9Y6R9 512 aa17.26■□□□□ 0.35
RNF111-209ENST00000560080 FKBP8Q14318 412 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms