RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
HMGN2P47-201ENST00000559378 AEBP2Q6ZN18 517 aaPredicted RBP11.57□□□□□ -0.56
HMGN2P47-201ENST00000559378 MYT1Q01538 1121 aa11.21□□□□□ -0.61
HMGN2P47-201ENST00000559378 TTBK1Q5TCY1 1321 aaPredicted RBP11.15□□□□□ -0.62
HMGN2P47-201ENST00000559378 DAXXQ9UER7 740 aaPredicted RBP11.04□□□□□ -0.64
HMGN2P47-201ENST00000559378 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
HMGN2P47-201ENST00000559378 CHIC1Q5VXU3 224 aa10.88□□□□□ -0.67
HMGN2P47-201ENST00000559378 APLP2Q06481 763 aa10.74□□□□□ -0.69
HMGN2P47-201ENST00000559378 ERICH6Q7L0X2 663 aa10.72□□□□□ -0.69
HMGN2P47-201ENST00000559378 NCBP3Q53F19 620 aaKnown RBP10.69□□□□□ -0.7
HMGN2P47-201ENST00000559378 EHMT2Q96KQ7 1210 aa10.63□□□□□ -0.71
HMGN2P47-201ENST00000559378 PRKCSHP14314 528 aaPredicted RBP10.62□□□□□ -0.71
HMGN2P47-201ENST00000559378 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
HMGN2P47-201ENST00000559378 PLPPR3Q6T4P5 718 aa10.45□□□□□ -0.74
HMGN2P47-201ENST00000559378 AMER1Q5JTC6 1135 aaPredicted RBP10.36□□□□□ -0.75
HMGN2P47-201ENST00000559378 ARXQ96QS3 562 aa10.36□□□□□ -0.75
HMGN2P47-201ENST00000559378 RANGAP1P46060 587 aaPredicted RBP10.16□□□□□ -0.78
HMGN2P47-201ENST00000559378 EIF5BO60841 1220 aaKnown RBP10.05□□□□□ -0.8
HMGN2P47-201ENST00000559378 TIMELESSQ9UNS1 1208 aa10.03□□□□□ -0.8
HMGN2P47-201ENST00000559378 KCNA4P22459 653 aa10□□□□□ -0.81
HMGN2P47-201ENST00000559378 HOMEZQ8IX15 550 aa10□□□□□ -0.81
HMGN2P47-201ENST00000559378 SENP3Q9H4L4 574 aaPredicted RBP10□□□□□ -0.81
HMGN2P47-201ENST00000559378 TULP1O00294 542 aaPredicted RBP9.89□□□□□ -0.83
HMGN2P47-201ENST00000559378 CSRNP3Q8WYN3 585 aa9.87□□□□□ -0.83
HMGN2P47-201ENST00000559378 TAOK2Q9UL54 1235 aa9.86□□□□□ -0.83
HMGN2P47-201ENST00000559378 KLHL34Q8N239 644 aa9.81□□□□□ -0.84
HMGN2P47-201ENST00000559378 PHF23Q9BUL5 403 aaPredicted RBP9.78□□□□□ -0.84
HMGN2P47-201ENST00000559378 BCANQ96GW7 911 aa9.77□□□□□ -0.85
HMGN2P47-201ENST00000559378 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
HMGN2P47-201ENST00000559378 TPRNQ4KMQ1 711 aa9.66□□□□□ -0.86
HMGN2P47-201ENST00000559378 BCL11AQ9H165 835 aa9.65□□□□□ -0.86
HMGN2P47-201ENST00000559378 GTF3C3Q9Y5Q9 886 aa9.63□□□□□ -0.87
HMGN2P47-201ENST00000559378 NPM2Q86SE8 214 aaKnown RBP9.58□□□□□ -0.88
HMGN2P47-201ENST00000559378 PLEKHG5O94827 1062 aa9.55□□□□□ -0.88
HMGN2P47-201ENST00000559378 FBXO3Q9UK99 471 aa9.55□□□□□ -0.88
HMGN2P47-201ENST00000559378 PLCB2Q00722 1185 aa9.47□□□□□ -0.89
HMGN2P47-201ENST00000559378 POTEDQ86YR6 584 aa9.47□□□□□ -0.89
HMGN2P47-201ENST00000559378 C14orf37Q86TY3 774 aa9.42□□□□□ -0.9
HMGN2P47-201ENST00000559378 FAM9AQ8IZU1 332 aaPredicted RBP9.39□□□□□ -0.91
HMGN2P47-201ENST00000559378 TMEM132AQ24JP5 1023 aa9.38□□□□□ -0.91
HMGN2P47-201ENST00000559378 HAP1P54257 671 aaPredicted RBP9.37□□□□□ -0.91
HMGN2P47-201ENST00000559378 DCAF8L2P0C7V8 631 aa9.35□□□□□ -0.91
HMGN2P47-201ENST00000559378 FOXD1Q16676 465 aa9.34□□□□□ -0.91
HMGN2P47-201ENST00000559378 PDIA4P13667 645 aaKnown RBP9.31□□□□□ -0.92
HMGN2P47-201ENST00000559378 SLC4A1APQ9BWU0 796 aaKnown RBP9.31□□□□□ -0.92
HMGN2P47-201ENST00000559378 UBE2Q2Q8WVN8 375 aa9.27□□□□□ -0.93
HMGN2P47-201ENST00000559378 TRIM26Q12899 539 aaPredicted RBP9.25□□□□□ -0.93
HMGN2P47-201ENST00000559378 VSIG10Q8N0Z9 540 aa9.24□□□□□ -0.93
HMGN2P47-201ENST00000559378 LOC105371045A0A1W2PR82 267 aa9.22□□□□□ -0.93
HMGN2P47-201ENST00000559378 NEFLP07196 543 aa9.16□□□□□ -0.94
HMGN2P47-201ENST00000559378 CDK11AQ9UQ88 783 aaPredicted RBP9.16□□□□□ -0.94
HMGN2P47-201ENST00000559378 PDE4CQ08493 712 aa9.13□□□□□ -0.95
HMGN2P47-201ENST00000559378 CNKSR2Q8WXI2 1034 aa9.12□□□□□ -0.95
HMGN2P47-201ENST00000559378 CHMP4AQ9BY43 222 aa9.12□□□□□ -0.95
HMGN2P47-201ENST00000559378 SUPT5HO00267 1087 aaKnown RBP9.11□□□□□ -0.95
HMGN2P47-201ENST00000559378 CDK11BP21127 795 aaKnown RBP9.11□□□□□ -0.95
HMGN2P47-201ENST00000559378 HRCP23327 699 aa9.11□□□□□ -0.95
HMGN2P47-201ENST00000559378 BRD2P25440 801 aaKnown RBP9.1□□□□□ -0.95
HMGN2P47-201ENST00000559378 TAF7LQ5H9L4 462 aa9.08□□□□□ -0.96
HMGN2P47-201ENST00000559378 SHROOM4Q9ULL8 1493 aa9.08□□□□□ -0.96
HMGN2P47-201ENST00000559378 HMGB1P09429 215 aaKnown RBP9.07□□□□□ -0.96
HMGN2P47-201ENST00000559378 UBTFP17480 764 aaKnown RBP9.05□□□□□ -0.96
HMGN2P47-201ENST00000559378 SAMD1Q6SPF0 538 aaPredicted RBP9.05□□□□□ -0.96
HMGN2P47-201ENST00000559378 PKNOX2Q96KN3 472 aa9.05□□□□□ -0.96
HMGN2P47-201ENST00000559378 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
HMGN2P47-201ENST00000559378 KDM2AQ9Y2K7 1162 aa8.99□□□□□ -0.97
HMGN2P47-201ENST00000559378 CENPBP07199 599 aaPredicted RBP8.97□□□□□ -0.97
HMGN2P47-201ENST00000559378 MSH5O43196 834 aa8.95□□□□□ -0.98
HMGN2P47-201ENST00000559378 DHX37Q8IY37 1157 aaKnown RBP8.92□□□□□ -0.98
HMGN2P47-201ENST00000559378 CCDC9Q9Y3X0 531 aaKnown RBP8.87□□□□□ -0.99
HMGN2P47-201ENST00000559378 FBLN2P98095 1184 aa8.85□□□□□ -0.99
HMGN2P47-201ENST00000559378 FGD1P98174 961 aa8.85□□□□□ -0.99
HMGN2P47-201ENST00000559378 PUS7Q96PZ0 661 aaKnown RBP8.85□□□□□ -0.99
HMGN2P47-201ENST00000559378 ZBTB22O15209 634 aa8.84□□□□□ -0.99
HMGN2P47-201ENST00000559378 IGSF3O75054 1194 aa8.84□□□□□ -0.99
HMGN2P47-201ENST00000559378 ZNF326Q5BKZ1 582 aaKnown RBP8.84□□□□□ -0.99
HMGN2P47-201ENST00000559378 BCL11BQ9C0K0 894 aaPredicted RBP8.84□□□□□ -0.99
HMGN2P47-201ENST00000559378 FKBP8Q14318 412 aa8.83□□□□□ -1
HMGN2P47-201ENST00000559378 BCCIPQ9P287 314 aaKnown RBP eCLIP8.82□□□□□ -1
HMGN2P47-201ENST00000559378 PPP6R1Q9UPN7 881 aa8.82□□□□□ -1
HMGN2P47-201ENST00000559378 RSPH4AQ5TD94 716 aa8.8□□□□□ -1
HMGN2P47-201ENST00000559378 POLR3GLQ9BT43 218 aa8.75□□□□□ -1.01
HMGN2P47-201ENST00000559378 SCAF1Q9H7N4 1312 aaKnown RBP8.73□□□□□ -1.01
HMGN2P47-201ENST00000559378 NBR1Q14596 966 aa8.7□□□□□ -1.02
HMGN2P47-201ENST00000559378 ZBTB7CA1YPR0 619 aa8.69□□□□□ -1.02
HMGN2P47-201ENST00000559378 ANP32EQ9BTT0 268 aa8.69□□□□□ -1.02
HMGN2P47-201ENST00000559378 PIAS4Q8N2W9 510 aaPredicted RBP8.68□□□□□ -1.02
HMGN2P47-201ENST00000559378 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
HMGN2P47-201ENST00000559378 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
HMGN2P47-201ENST00000559378 ZEB1P37275 1124 aaPredicted RBP8.65□□□□□ -1.02
HMGN2P47-201ENST00000559378 AAMPQ13685 434 aa8.63□□□□□ -1.03
HMGN2P47-201ENST00000559378 TICAM2Q86XR7 235 aa8.63□□□□□ -1.03
HMGN2P47-201ENST00000559378 CFAP44Q96MT7 982 aa8.62□□□□□ -1.03
HMGN2P47-201ENST00000559378 CLSPNQ9HAW4 1339 aa8.61□□□□□ -1.03
HMGN2P47-201ENST00000559378 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
HMGN2P47-201ENST00000559378 NAP1L5Q96NT1 182 aaPredicted RBP8.61□□□□□ -1.03
HMGN2P47-201ENST00000559378 CLSTN1O94985 981 aa8.6□□□□□ -1.03
HMGN2P47-201ENST00000559378 ERICH6BQ5W0A0 696 aa8.6□□□□□ -1.03
HMGN2P47-201ENST00000559378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.6□□□□□ -1.03
HMGN2P47-201ENST00000559378 ARID3AQ99856 593 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms