RNA–Protein interactions for RNA: ENST00000558905.1

AC079328.3-201, humanhuman

TSL 3 BASIC

Gene AC079328.3, Length 691 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079328.3-201ENST00000558905 AEBP2Q6ZN18 517 aaPredicted RBP27.59■■■□□ 2.01
AC079328.3-201ENST00000558905 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
AC079328.3-201ENST00000558905 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
AC079328.3-201ENST00000558905 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
AC079328.3-201ENST00000558905 FOXD1Q16676 465 aa22.12■■□□□ 1.13
AC079328.3-201ENST00000558905 POTEDQ86YR6 584 aa21.61■■□□□ 1.05
AC079328.3-201ENST00000558905 PLPPR3Q6T4P5 718 aa21.33■■□□□ 1.01
AC079328.3-201ENST00000558905 MSH5O43196 834 aa20.95■□□□□ 0.94
AC079328.3-201ENST00000558905 PIAS4Q8N2W9 510 aaPredicted RBP20.46■□□□□ 0.87
AC079328.3-201ENST00000558905 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
AC079328.3-201ENST00000558905 ADRA2BP18089 450 aa20.23■□□□□ 0.83
AC079328.3-201ENST00000558905 KCNA4P22459 653 aa19.07■□□□□ 0.64
AC079328.3-201ENST00000558905 PPP4R3CPQ6ZMV5 832 aa18.92■□□□□ 0.62
AC079328.3-201ENST00000558905 DMRT2Q9Y5R5 561 aa18.64■□□□□ 0.57
AC079328.3-201ENST00000558905 MAPK8IP2Q13387 824 aaPredicted RBP18.62■□□□□ 0.57
AC079328.3-201ENST00000558905 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
AC079328.3-201ENST00000558905 CACNB1Q02641 598 aaPredicted RBP18.37■□□□□ 0.53
AC079328.3-201ENST00000558905 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
AC079328.3-201ENST00000558905 NPM3O75607 178 aaKnown RBP18.32■□□□□ 0.52
AC079328.3-201ENST00000558905 CNKSR2Q8WXI2 1034 aa18.23■□□□□ 0.51
AC079328.3-201ENST00000558905 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
AC079328.3-201ENST00000558905 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
AC079328.3-201ENST00000558905 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
AC079328.3-201ENST00000558905 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
AC079328.3-201ENST00000558905 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
AC079328.3-201ENST00000558905 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
AC079328.3-201ENST00000558905 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
AC079328.3-201ENST00000558905 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
AC079328.3-201ENST00000558905 ZBTB22O15209 634 aa17.62■□□□□ 0.41
AC079328.3-201ENST00000558905 C1QBPQ07021 282 aaKnown RBP17.54■□□□□ 0.4
AC079328.3-201ENST00000558905 FOXD4L1Q9NU39 408 aa17.31■□□□□ 0.36
AC079328.3-201ENST00000558905 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
AC079328.3-201ENST00000558905 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
AC079328.3-201ENST00000558905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.28
AC079328.3-201ENST00000558905 POTEHQ6S545 545 aa16.8■□□□□ 0.28
AC079328.3-201ENST00000558905 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
AC079328.3-201ENST00000558905 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
AC079328.3-201ENST00000558905 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
AC079328.3-201ENST00000558905 DSG3P32926 999 aa16.46■□□□□ 0.23
AC079328.3-201ENST00000558905 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
AC079328.3-201ENST00000558905 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
AC079328.3-201ENST00000558905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
AC079328.3-201ENST00000558905 CAPN15O75808 1086 aa16.34■□□□□ 0.21
AC079328.3-201ENST00000558905 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
AC079328.3-201ENST00000558905 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
AC079328.3-201ENST00000558905 FKBP8Q14318 412 aa16.03■□□□□ 0.16
AC079328.3-201ENST00000558905 APLP2Q06481 763 aa16.01■□□□□ 0.15
AC079328.3-201ENST00000558905 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
AC079328.3-201ENST00000558905 ABCB7O75027 752 aa15.89■□□□□ 0.13
AC079328.3-201ENST00000558905 MKRN4PQ13434 485 aaPredicted RBP15.8■□□□□ 0.12
AC079328.3-201ENST00000558905 POLA2Q14181 598 aa15.76■□□□□ 0.11
AC079328.3-201ENST00000558905 RBM42Q9BTD8 480 aaKnown RBP15.71■□□□□ 0.11
AC079328.3-201ENST00000558905 CHRDL2Q6WN34 429 aa15.63■□□□□ 0.09
AC079328.3-201ENST00000558905 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
AC079328.3-201ENST00000558905 FBLN2P98095 1184 aa15.55■□□□□ 0.08
AC079328.3-201ENST00000558905 RTN4Q9NQC3 1192 aaKnown RBP15.47■□□□□ 0.07
AC079328.3-201ENST00000558905 SP7Q8TDD2 431 aaPredicted RBP15.43■□□□□ 0.06
AC079328.3-201ENST00000558905 PROM2Q8N271 834 aa15.42■□□□□ 0.06
AC079328.3-201ENST00000558905 ZBTB12Q9Y330 459 aaPredicted RBP15.37■□□□□ 0.05
AC079328.3-201ENST00000558905 AMER1Q5JTC6 1135 aaPredicted RBP15.35■□□□□ 0.05
AC079328.3-201ENST00000558905 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
AC079328.3-201ENST00000558905 FBXO3Q9UK99 471 aa15.21■□□□□ 0.03
AC079328.3-201ENST00000558905 OSCARQ8IYS5 282 aa15.2■□□□□ 0.02
AC079328.3-201ENST00000558905 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
AC079328.3-201ENST00000558905 PIP4P2Q8N4L2 257 aa15.12■□□□□ 0.01
AC079328.3-201ENST00000558905 SPDYE2BA6NHP3 402 aa15.09■□□□□ 0.01
AC079328.3-201ENST00000558905 SPDYE6P0CI01 402 aa15.09■□□□□ 0.01
AC079328.3-201ENST00000558905 VASPP50552 380 aaPredicted RBP15.09■□□□□ 0.01
AC079328.3-201ENST00000558905 SPDYE2Q495Y8 402 aa15.09■□□□□ 0.01
AC079328.3-201ENST00000558905 SSUH2Q9Y2M2 353 aa15.08■□□□□ 0
AC079328.3-201ENST00000558905 REM2Q8IYK8 340 aaPredicted RBP15.07■□□□□ 0
AC079328.3-201ENST00000558905 HAX1O00165 279 aa15.02■□□□□ -0
AC079328.3-201ENST00000558905 IFNLR1Q8IU57 520 aaPredicted RBP15.01□□□□□ -0.01
AC079328.3-201ENST00000558905 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
AC079328.3-201ENST00000558905 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
AC079328.3-201ENST00000558905 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
AC079328.3-201ENST00000558905 EVX2Q03828 476 aa14.81□□□□□ -0.04
AC079328.3-201ENST00000558905 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
AC079328.3-201ENST00000558905 PKD2Q13563 968 aa14.69□□□□□ -0.06
AC079328.3-201ENST00000558905 MIER1Q8N108 512 aa14.68□□□□□ -0.06
AC079328.3-201ENST00000558905 KLHL34Q8N239 644 aa14.67□□□□□ -0.06
AC079328.3-201ENST00000558905 PLCD3Q8N3E9 789 aa14.67□□□□□ -0.06
AC079328.3-201ENST00000558905 SLC24A1O60721 1099 aa14.64□□□□□ -0.07
AC079328.3-201ENST00000558905 SPOCK2Q92563 424 aa14.63□□□□□ -0.07
AC079328.3-201ENST00000558905 PRKAR2AP13861 404 aaKnown RBP14.51□□□□□ -0.09
AC079328.3-201ENST00000558905 SPDYE1Q8NFV5 336 aaPredicted RBP14.5□□□□□ -0.09
AC079328.3-201ENST00000558905 C19orf67A6NJJ6 358 aa14.49□□□□□ -0.09
AC079328.3-201ENST00000558905 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
AC079328.3-201ENST00000558905 LHX8Q68G74 356 aa14.46□□□□□ -0.09
AC079328.3-201ENST00000558905 GABBR2O75899 941 aa14.43□□□□□ -0.1
AC079328.3-201ENST00000558905 ECM2O94769 699 aaPredicted RBP14.42□□□□□ -0.1
AC079328.3-201ENST00000558905 PLEKHG5O94827 1062 aa14.41□□□□□ -0.1
AC079328.3-201ENST00000558905 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
AC079328.3-201ENST00000558905 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
AC079328.3-201ENST00000558905 DCAF8L2P0C7V8 631 aa14.38□□□□□ -0.11
AC079328.3-201ENST00000558905 PRR29P0C7W0 189 aa14.38□□□□□ -0.11
AC079328.3-201ENST00000558905 MNX1P50219 401 aaPredicted RBP14.36□□□□□ -0.11
AC079328.3-201ENST00000558905 RGL2O15211 777 aa14.34□□□□□ -0.11
AC079328.3-201ENST00000558905 CIZ1Q9ULV3 898 aaPredicted RBP14.34□□□□□ -0.11
AC079328.3-201ENST00000558905 NUBP1P53384 320 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms