RNA–Protein interactions for RNA: ENST00000558843.5

COPS2-205, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best)

Gene COPS2, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-205ENST00000558843 AEBP2Q6ZN18 517 aaPredicted RBP29.57■■■□□ 2.32
COPS2-205ENST00000558843 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
COPS2-205ENST00000558843 SENP3Q9H4L4 574 aaPredicted RBP25.21■■□□□ 1.63
COPS2-205ENST00000558843 PHF23Q9BUL5 403 aaPredicted RBP24.87■■□□□ 1.57
COPS2-205ENST00000558843 FOXD1Q16676 465 aa23.49■■□□□ 1.35
COPS2-205ENST00000558843 PLPPR3Q6T4P5 718 aa22.41■■□□□ 1.18
COPS2-205ENST00000558843 MSH5O43196 834 aa21.99■■□□□ 1.11
COPS2-205ENST00000558843 PIAS4Q8N2W9 510 aaPredicted RBP21.98■■□□□ 1.11
COPS2-205ENST00000558843 PPP6R1Q9UPN7 881 aa21.97■■□□□ 1.11
COPS2-205ENST00000558843 ADRA2BP18089 450 aa21.91■■□□□ 1.1
COPS2-205ENST00000558843 POTEDQ86YR6 584 aa21.48■■□□□ 1.03
COPS2-205ENST00000558843 MAPK8IP2Q13387 824 aaPredicted RBP20.11■□□□□ 0.81
COPS2-205ENST00000558843 SCAF1Q9H7N4 1312 aaKnown RBP20.01■□□□□ 0.79
COPS2-205ENST00000558843 DMRT2Q9Y5R5 561 aa20■□□□□ 0.79
COPS2-205ENST00000558843 PPP4R3CPQ6ZMV5 832 aa19.65■□□□□ 0.74
COPS2-205ENST00000558843 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
COPS2-205ENST00000558843 HOXD11P31277 338 aaPredicted RBP19.25■□□□□ 0.67
COPS2-205ENST00000558843 DCAF8L1A6NGE4 600 aa19.18■□□□□ 0.66
COPS2-205ENST00000558843 RNF216Q9NWF9 866 aaPredicted RBP19.11■□□□□ 0.65
COPS2-205ENST00000558843 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
COPS2-205ENST00000558843 CACNB1Q02641 598 aaPredicted RBP18.87■□□□□ 0.61
COPS2-205ENST00000558843 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
COPS2-205ENST00000558843 NPM3O75607 178 aaKnown RBP18.63■□□□□ 0.57
COPS2-205ENST00000558843 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
COPS2-205ENST00000558843 C1QBPQ07021 282 aaKnown RBP18.47■□□□□ 0.55
COPS2-205ENST00000558843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.536e-6■□□□□ 8.3
COPS2-205ENST00000558843 KCNA4P22459 653 aa18.28■□□□□ 0.52
COPS2-205ENST00000558843 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
COPS2-205ENST00000558843 SLC4A2P04920 1241 aa17.79■□□□□ 0.44
COPS2-205ENST00000558843 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
COPS2-205ENST00000558843 CAPN15O75808 1086 aa17.68■□□□□ 0.42
COPS2-205ENST00000558843 DSG3P32926 999 aa17.58■□□□□ 0.4
COPS2-205ENST00000558843 APLP2Q06481 763 aa17.45■□□□□ 0.38
COPS2-205ENST00000558843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
COPS2-205ENST00000558843 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
COPS2-205ENST00000558843 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
COPS2-205ENST00000558843 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
COPS2-205ENST00000558843 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
COPS2-205ENST00000558843 ABCB7O75027 752 aa17.29■□□□□ 0.36
COPS2-205ENST00000558843 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
COPS2-205ENST00000558843 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
COPS2-205ENST00000558843 FOXD4L1Q9NU39 408 aa17.06■□□□□ 0.32
COPS2-205ENST00000558843 POLA2Q14181 598 aa16.92■□□□□ 0.3
COPS2-205ENST00000558843 ATF5Q9Y2D1 282 aaPredicted RBP16.84■□□□□ 0.29
COPS2-205ENST00000558843 POTEHQ6S545 545 aa16.83■□□□□ 0.28
COPS2-205ENST00000558843 ZBTB22O15209 634 aa16.81■□□□□ 0.28
COPS2-205ENST00000558843 RBM42Q9BTD8 480 aaKnown RBP16.76■□□□□ 0.27
COPS2-205ENST00000558843 ZBTB12Q9Y330 459 aaPredicted RBP16.57■□□□□ 0.24
COPS2-205ENST00000558843 ATXN8OSP0DMR3 200 aa16.51■□□□□ 0.23
COPS2-205ENST00000558843 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
COPS2-205ENST00000558843 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
COPS2-205ENST00000558843 AKT1S1Q96B36 256 aa16.38■□□□□ 0.21
COPS2-205ENST00000558843 REM2Q8IYK8 340 aaPredicted RBP16.23■□□□□ 0.19
COPS2-205ENST00000558843 FBLN2P98095 1184 aa16.18■□□□□ 0.18
COPS2-205ENST00000558843 SPDYE2BA6NHP3 402 aa16.07■□□□□ 0.16
COPS2-205ENST00000558843 PITPNM1O00562 1244 aa16.07■□□□□ 0.16
COPS2-205ENST00000558843 SPDYE6P0CI01 402 aa16.07■□□□□ 0.16
COPS2-205ENST00000558843 SPDYE2Q495Y8 402 aa16.07■□□□□ 0.16
COPS2-205ENST00000558843 MKRN4PQ13434 485 aaPredicted RBP16.06■□□□□ 0.16
COPS2-205ENST00000558843 PIP4P2Q8N4L2 257 aa16.03■□□□□ 0.16
COPS2-205ENST00000558843 CSRNP3Q8WYN3 585 aa16.02■□□□□ 0.16
COPS2-205ENST00000558843 FXR2P51116 673 aaKnown RBP eCLIP15.92■□□□□ 0.14
COPS2-205ENST00000558843 ZNF692Q9BU19 519 aaPredicted RBP15.87■□□□□ 0.13
COPS2-205ENST00000558843 SSUH2Q9Y2M2 353 aa15.86■□□□□ 0.13
COPS2-205ENST00000558843 EHMT2Q96KQ7 1210 aa15.83■□□□□ 0.12
COPS2-205ENST00000558843 SPDYE1Q8NFV5 336 aaPredicted RBP15.79■□□□□ 0.12
COPS2-205ENST00000558843 SP7Q8TDD2 431 aaPredicted RBP15.78■□□□□ 0.12
COPS2-205ENST00000558843 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
COPS2-205ENST00000558843 HAX1O00165 279 aa15.71■□□□□ 0.11
COPS2-205ENST00000558843 PRKAR2AP13861 404 aaKnown RBP15.65■□□□□ 0.1
COPS2-205ENST00000558843 PABPN1Q86U42 306 aaKnown RBP eCLIP15.65■□□□□ 0.1
COPS2-205ENST00000558843 EVX2Q03828 476 aa15.53■□□□□ 0.08
COPS2-205ENST00000558843 PRR29P0C7W0 189 aa15.5■□□□□ 0.07
COPS2-205ENST00000558843 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
COPS2-205ENST00000558843 C19orf67A6NJJ6 358 aa15.41■□□□□ 0.06
COPS2-205ENST00000558843 SPDYE4A6NLX3 237 aa15.3■□□□□ 0.04
COPS2-205ENST00000558843 FARP1Q9Y4F1 1045 aaPredicted RBP15.23■□□□□ 0.03
COPS2-205ENST00000558843 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
COPS2-205ENST00000558843 GABBR2O75899 941 aa15.18■□□□□ 0.02
COPS2-205ENST00000558843 CD44P16070 742 aaKnown RBP15.15■□□□□ 0.02
COPS2-205ENST00000558843 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
COPS2-205ENST00000558843 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
COPS2-205ENST00000558843 PROM2Q8N271 834 aa14.92□□□□□ -0.02
COPS2-205ENST00000558843 ZNF579Q8NAF0 562 aaKnown RBP14.92□□□□□ -0.02
COPS2-205ENST00000558843 CLCN6P51797 869 aa14.91□□□□□ -0.02
COPS2-205ENST00000558843 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
COPS2-205ENST00000558843 MNX1P50219 401 aaPredicted RBP14.86□□□□□ -0.03
COPS2-205ENST00000558843 NPM1P06748 294 aaKnown RBP eCLIP14.83□□□□□ -0.04
COPS2-205ENST00000558843 PAK3O75914 559 aaPredicted RBP14.81□□□□□ -0.04
COPS2-205ENST00000558843 LHX8Q68G74 356 aa14.79□□□□□ -0.04
COPS2-205ENST00000558843 DCBLD2Q96PD2 775 aa14.77□□□□□ -0.05
COPS2-205ENST00000558843 GALR2O43603 387 aaPredicted RBP14.75□□□□□ -0.05
COPS2-205ENST00000558843 PHF12Q96QT6 1004 aa14.75□□□□□ -0.05
COPS2-205ENST00000558843 MIER1Q8N108 512 aa14.58□□□□□ -0.08
COPS2-205ENST00000558843 TSPYL2Q9H2G4 693 aaPredicted RBP14.58□□□□□ -0.08
COPS2-205ENST00000558843 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
COPS2-205ENST00000558843 FKBP8Q14318 412 aa14.55□□□□□ -0.08
COPS2-205ENST00000558843 MS4A3Q96HJ5 214 aa14.55□□□□□ -0.08
COPS2-205ENST00000558843 CCDC61Q9Y6R9 512 aa14.51□□□□□ -0.09
COPS2-205ENST00000558843 PLCD3Q8N3E9 789 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms