RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 CHIC1Q5VXU3 224 aa33.01■■■□□ 2.87
MARK3-213ENST00000558611 AEBP2Q6ZN18 517 aaPredicted RBP32.49■■■□□ 2.79
MARK3-213ENST00000558611 PHF23Q9BUL5 403 aaPredicted RBP29.13■■■□□ 2.25
MARK3-213ENST00000558611 SENP3Q9H4L4 574 aaPredicted RBP27.42■■□□□ 1.98
MARK3-213ENST00000558611 PLPPR3Q6T4P5 718 aa27.38■■□□□ 1.97
MARK3-213ENST00000558611 ADRA2BP18089 450 aa25.51■■□□□ 1.67
MARK3-213ENST00000558611 PPP6R1Q9UPN7 881 aa25.27■■□□□ 1.64
MARK3-213ENST00000558611 FOXD1Q16676 465 aa25.25■■□□□ 1.63
MARK3-213ENST00000558611 KCNA4P22459 653 aa25.1■■□□□ 1.61
MARK3-213ENST00000558611 EHMT2Q96KQ7 1210 aa24.84■■□□□ 1.57
MARK3-213ENST00000558611 PPP4R3CPQ6ZMV5 832 aa24.26■■□□□ 1.47
MARK3-213ENST00000558611 SLC4A1APQ9BWU0 796 aaKnown RBP24.14■■□□□ 1.45
MARK3-213ENST00000558611 PIAS4Q8N2W9 510 aaPredicted RBP24.12■■□□□ 1.45
MARK3-213ENST00000558611 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
MARK3-213ENST00000558611 NCBP3Q53F19 620 aaKnown RBP24.02■■□□□ 1.44
MARK3-213ENST00000558611 NPM3O75607 178 aaKnown RBP23.64■■□□□ 1.37
MARK3-213ENST00000558611 NISCHQ9Y2I1 1504 aa23.39■■□□□ 1.34
MARK3-213ENST00000558611 CNKSR2Q8WXI2 1034 aa23.33■■□□□ 1.33
MARK3-213ENST00000558611 SCAF1Q9H7N4 1312 aaKnown RBP23.24■■□□□ 1.31
MARK3-213ENST00000558611 ZBTB22O15209 634 aa23.11■■□□□ 1.29
MARK3-213ENST00000558611 DNAJC5BQ9UF47 199 aa22.9■■□□□ 1.26
MARK3-213ENST00000558611 MSH5O43196 834 aa22.84■■□□□ 1.25
MARK3-213ENST00000558611 FOXD4L1Q9NU39 408 aa22.78■■□□□ 1.24
MARK3-213ENST00000558611 MAPK8IP2Q13387 824 aaPredicted RBP22.57■■□□□ 1.2
MARK3-213ENST00000558611 RNF216Q9NWF9 866 aaPredicted RBP22.57■■□□□ 1.2
MARK3-213ENST00000558611 HOXD11P31277 338 aaPredicted RBP22.15■■□□□ 1.14
MARK3-213ENST00000558611 DMRT2Q9Y5R5 561 aa22.1■■□□□ 1.13
MARK3-213ENST00000558611 SLC4A2P04920 1241 aa22■■□□□ 1.11
MARK3-213ENST00000558611 AMER1Q5JTC6 1135 aaPredicted RBP22■■□□□ 1.11
MARK3-213ENST00000558611 ATXN8OSP0DMR3 200 aa21.93■■□□□ 1.1
MARK3-213ENST00000558611 RTN4Q9NQC3 1192 aaKnown RBP21.91■■□□□ 1.1
MARK3-213ENST00000558611 SLC24A1O60721 1099 aa21.88■■□□□ 1.09
MARK3-213ENST00000558611 MYCNP04198 464 aaPredicted RBP21.85■■□□□ 1.09
MARK3-213ENST00000558611 POTEDQ86YR6 584 aa21.79■■□□□ 1.08
MARK3-213ENST00000558611 FKBP8Q14318 412 aa21.63■■□□□ 1.05
MARK3-213ENST00000558611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.1■□□□□ 0.97
MARK3-213ENST00000558611 HNRNPUL2Q1KMD3 747 aaKnown RBP21.1■□□□□ 0.97
MARK3-213ENST00000558611 ATF5Q9Y2D1 282 aaPredicted RBP21.1■□□□□ 0.97
MARK3-213ENST00000558611 SAMD1Q6SPF0 538 aaPredicted RBP21.06■□□□□ 0.96
MARK3-213ENST00000558611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.04■□□□□ 0.962e-9■■■■■ 30.5
MARK3-213ENST00000558611 DCAF8L1A6NGE4 600 aa20.96■□□□□ 0.95
MARK3-213ENST00000558611 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
MARK3-213ENST00000558611 U3KPZ7 1027 aaPredicted RBP20.87■□□□□ 0.93
MARK3-213ENST00000558611 ZNF219Q9P2Y4 722 aaPredicted RBP20.65■□□□□ 0.9
MARK3-213ENST00000558611 FBXO3Q9UK99 471 aa20.59■□□□□ 0.89
MARK3-213ENST00000558611 APLP2Q06481 763 aa20.58■□□□□ 0.89
MARK3-213ENST00000558611 SPDYE4A6NLX3 237 aa20.43■□□□□ 0.86
MARK3-213ENST00000558611 ABCC9O60706 1549 aa20.37■□□□□ 0.85
MARK3-213ENST00000558611 PROM2Q8N271 834 aa20.35■□□□□ 0.85
MARK3-213ENST00000558611 MKRN4PQ13434 485 aaPredicted RBP20.27■□□□□ 0.84
MARK3-213ENST00000558611 PLCB2Q00722 1185 aa20.24■□□□□ 0.83
MARK3-213ENST00000558611 VASPP50552 380 aaPredicted RBP20.23■□□□□ 0.83
MARK3-213ENST00000558611 FBLN2P98095 1184 aa20.18■□□□□ 0.82
MARK3-213ENST00000558611 IFNLR1Q8IU57 520 aaPredicted RBP20.04■□□□□ 0.8
MARK3-213ENST00000558611 TRHP20396 242 aaPredicted RBP19.94■□□□□ 0.78
MARK3-213ENST00000558611 POLA2Q14181 598 aa19.93■□□□□ 0.78
MARK3-213ENST00000558611 HAP1P54257 671 aaPredicted RBP19.89■□□□□ 0.77
MARK3-213ENST00000558611 DCAF8L2P0C7V8 631 aa19.88■□□□□ 0.77
MARK3-213ENST00000558611 PKD2Q13563 968 aa19.87■□□□□ 0.77
MARK3-213ENST00000558611 SPINK5Q9NQ38 1064 aaPredicted RBP19.87■□□□□ 0.77
MARK3-213ENST00000558611 ZBTB12Q9Y330 459 aaPredicted RBP19.77■□□□□ 0.76
MARK3-213ENST00000558611 CAPN15O75808 1086 aa19.73■□□□□ 0.75
MARK3-213ENST00000558611 VSIG10Q8N0Z9 540 aa19.71■□□□□ 0.75
MARK3-213ENST00000558611 BCANQ96GW7 911 aa19.7■□□□□ 0.74
MARK3-213ENST00000558611 RNF39Q9H2S5 420 aa19.68■□□□□ 0.74
MARK3-213ENST00000558611 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
MARK3-213ENST00000558611 SPOCK2Q92563 424 aa19.62■□□□□ 0.73
MARK3-213ENST00000558611 NACADO15069 1562 aa19.61■□□□□ 0.73
MARK3-213ENST00000558611 KLHL34Q8N239 644 aa19.56■□□□□ 0.72
MARK3-213ENST00000558611 BBXQ8WY36 941 aaPredicted RBP19.56■□□□□ 0.72
MARK3-213ENST00000558611 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.55■□□□□ 0.72
MARK3-213ENST00000558611 C1QBPQ07021 282 aaKnown RBP19.54■□□□□ 0.72
MARK3-213ENST00000558611 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
MARK3-213ENST00000558611 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
MARK3-213ENST00000558611 ECM2O94769 699 aaPredicted RBP19.5■□□□□ 0.71
MARK3-213ENST00000558611 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
MARK3-213ENST00000558611 ABCB7O75027 752 aa19.44■□□□□ 0.7
MARK3-213ENST00000558611 ZNF692Q9BU19 519 aaPredicted RBP19.4■□□□□ 0.7
MARK3-213ENST00000558611 TAOK2Q9UL54 1235 aa19.4■□□□□ 0.7
MARK3-213ENST00000558611 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
MARK3-213ENST00000558611 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
MARK3-213ENST00000558611 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
MARK3-213ENST00000558611 PAXIP1Q6ZW49 1069 aaPredicted RBP19.35■□□□□ 0.69
MARK3-213ENST00000558611 PLCD3Q8N3E9 789 aa19.34■□□□□ 0.69
MARK3-213ENST00000558611 SPDYE2BA6NHP3 402 aa19.32■□□□□ 0.68
MARK3-213ENST00000558611 SPDYE6P0CI01 402 aa19.32■□□□□ 0.68
MARK3-213ENST00000558611 SPDYE2Q495Y8 402 aa19.32■□□□□ 0.68
MARK3-213ENST00000558611 KDM2AQ9Y2K7 1162 aa19.32■□□□□ 0.68
MARK3-213ENST00000558611 PRKCSHP14314 528 aaPredicted RBP19.31■□□□□ 0.68
MARK3-213ENST00000558611 SSUH2Q9Y2M2 353 aa19.31■□□□□ 0.68
MARK3-213ENST00000558611 CFAP44Q96MT7 982 aa19.28■□□□□ 0.68
MARK3-213ENST00000558611 RGL2O15211 777 aa19.27■□□□□ 0.68
MARK3-213ENST00000558611 MIER1Q8N108 512 aa19.22■□□□□ 0.67
MARK3-213ENST00000558611 SPRYD3Q8NCJ5 442 aa19.2■□□□□ 0.66
MARK3-213ENST00000558611 OSCARQ8IYS5 282 aa19.19■□□□□ 0.66
MARK3-213ENST00000558611 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
MARK3-213ENST00000558611 DSG3P32926 999 aa19.15■□□□□ 0.66
MARK3-213ENST00000558611 ZBTB47Q9UFB7 747 aaPredicted RBP19.11■□□□□ 0.65
MARK3-213ENST00000558611 PLEKHG5O94827 1062 aa19.08■□□□□ 0.64
MARK3-213ENST00000558611 BICRAQ9NZM4 1560 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms