RNA–Protein interactions for RNA: ENST00000558342.1

AC105339.2-201, humanhuman

TSL 3 BASIC

Gene AC105339.2, Length 1,091 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.2-201ENST00000558342 AEBP2Q6ZN18 517 aaPredicted RBP26.59■■□□□ 1.85
AC105339.2-201ENST00000558342 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
AC105339.2-201ENST00000558342 SENP3Q9H4L4 574 aaPredicted RBP22.56■■□□□ 1.2
AC105339.2-201ENST00000558342 PHF23Q9BUL5 403 aaPredicted RBP22.28■■□□□ 1.16
AC105339.2-201ENST00000558342 FOXD1Q16676 465 aa21.15■□□□□ 0.98
AC105339.2-201ENST00000558342 POTEDQ86YR6 584 aa19.81■□□□□ 0.76
AC105339.2-201ENST00000558342 MSH5O43196 834 aa19.77■□□□□ 0.76
AC105339.2-201ENST00000558342 PLPPR3Q6T4P5 718 aa19.73■□□□□ 0.75
AC105339.2-201ENST00000558342 PIAS4Q8N2W9 510 aaPredicted RBP19.65■□□□□ 0.74
AC105339.2-201ENST00000558342 PPP6R1Q9UPN7 881 aa19.64■□□□□ 0.73
AC105339.2-201ENST00000558342 ADRA2BP18089 450 aa19.53■□□□□ 0.72
AC105339.2-201ENST00000558342 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
AC105339.2-201ENST00000558342 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
AC105339.2-201ENST00000558342 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
AC105339.2-201ENST00000558342 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
AC105339.2-201ENST00000558342 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
AC105339.2-201ENST00000558342 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
AC105339.2-201ENST00000558342 DCAF8L1A6NGE4 600 aa17.1■□□□□ 0.33
AC105339.2-201ENST00000558342 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
AC105339.2-201ENST00000558342 KCNA4P22459 653 aa16.93■□□□□ 0.3
AC105339.2-201ENST00000558342 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
AC105339.2-201ENST00000558342 RNF39Q9H2S5 420 aa16.92■□□□□ 0.3
AC105339.2-201ENST00000558342 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
AC105339.2-201ENST00000558342 C1QBPQ07021 282 aaKnown RBP16.59■□□□□ 0.25
AC105339.2-201ENST00000558342 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
AC105339.2-201ENST00000558342 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
AC105339.2-201ENST00000558342 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
AC105339.2-201ENST00000558342 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
AC105339.2-201ENST00000558342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
AC105339.2-201ENST00000558342 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
AC105339.2-201ENST00000558342 U3KPZ7 1027 aaPredicted RBP16.01■□□□□ 0.15
AC105339.2-201ENST00000558342 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
AC105339.2-201ENST00000558342 DSG3P32926 999 aa15.78■□□□□ 0.12
AC105339.2-201ENST00000558342 CAPN15O75808 1086 aa15.74■□□□□ 0.11
AC105339.2-201ENST00000558342 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
AC105339.2-201ENST00000558342 ZBTB22O15209 634 aa15.56■□□□□ 0.08
AC105339.2-201ENST00000558342 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
AC105339.2-201ENST00000558342 POTEHQ6S545 545 aa15.44■□□□□ 0.06
AC105339.2-201ENST00000558342 ABCB7O75027 752 aa15.41■□□□□ 0.06
AC105339.2-201ENST00000558342 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
AC105339.2-201ENST00000558342 FOXD4L1Q9NU39 408 aa15.34■□□□□ 0.05
AC105339.2-201ENST00000558342 APLP2Q06481 763 aa15.32■□□□□ 0.04
AC105339.2-201ENST00000558342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
AC105339.2-201ENST00000558342 HNRNPUL2Q1KMD3 747 aaKnown RBP15.29■□□□□ 0.04
AC105339.2-201ENST00000558342 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
AC105339.2-201ENST00000558342 MYCNP04198 464 aaPredicted RBP15.08■□□□□ 0
AC105339.2-201ENST00000558342 POLA2Q14181 598 aa14.98□□□□□ -0.01
AC105339.2-201ENST00000558342 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
AC105339.2-201ENST00000558342 ATF5Q9Y2D1 282 aaPredicted RBP14.88□□□□□ -0.03
AC105339.2-201ENST00000558342 CHRDL2Q6WN34 429 aa14.78□□□□□ -0.04
AC105339.2-201ENST00000558342 AMER1Q5JTC6 1135 aaPredicted RBP14.73□□□□□ -0.05
AC105339.2-201ENST00000558342 RTN4Q9NQC3 1192 aaKnown RBP14.72□□□□□ -0.05
AC105339.2-201ENST00000558342 ATXN8OSP0DMR3 200 aa14.68□□□□□ -0.06
AC105339.2-201ENST00000558342 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
AC105339.2-201ENST00000558342 FKBP8Q14318 412 aa14.62□□□□□ -0.07
AC105339.2-201ENST00000558342 AKT1S1Q96B36 256 aa14.59□□□□□ -0.07
AC105339.2-201ENST00000558342 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
AC105339.2-201ENST00000558342 ZBTB12Q9Y330 459 aaPredicted RBP14.57□□□□□ -0.08
AC105339.2-201ENST00000558342 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
AC105339.2-201ENST00000558342 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
AC105339.2-201ENST00000558342 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
AC105339.2-201ENST00000558342 SP7Q8TDD2 431 aaPredicted RBP14.36□□□□□ -0.11
AC105339.2-201ENST00000558342 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.12
AC105339.2-201ENST00000558342 MKRN4PQ13434 485 aaPredicted RBP14.17□□□□□ -0.14
AC105339.2-201ENST00000558342 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
AC105339.2-201ENST00000558342 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
AC105339.2-201ENST00000558342 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
AC105339.2-201ENST00000558342 HAX1O00165 279 aa14.14□□□□□ -0.15
AC105339.2-201ENST00000558342 FBLN2P98095 1184 aa14.12□□□□□ -0.15
AC105339.2-201ENST00000558342 EVX2Q03828 476 aa14.1□□□□□ -0.15
AC105339.2-201ENST00000558342 SSUH2Q9Y2M2 353 aa14.01□□□□□ -0.17
AC105339.2-201ENST00000558342 PRKAR2AP13861 404 aaKnown RBP13.96□□□□□ -0.17
AC105339.2-201ENST00000558342 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
AC105339.2-201ENST00000558342 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
AC105339.2-201ENST00000558342 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
AC105339.2-201ENST00000558342 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
AC105339.2-201ENST00000558342 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
AC105339.2-201ENST00000558342 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
AC105339.2-201ENST00000558342 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
AC105339.2-201ENST00000558342 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
AC105339.2-201ENST00000558342 GABBR2O75899 941 aa13.68□□□□□ -0.22
AC105339.2-201ENST00000558342 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
AC105339.2-201ENST00000558342 VASPP50552 380 aaPredicted RBP13.65□□□□□ -0.22
AC105339.2-201ENST00000558342 DCAF8L2P0C7V8 631 aa13.58□□□□□ -0.24
AC105339.2-201ENST00000558342 PROM2Q8N271 834 aa13.58□□□□□ -0.24
AC105339.2-201ENST00000558342 PLCB2Q00722 1185 aa13.56□□□□□ -0.24
AC105339.2-201ENST00000558342 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
AC105339.2-201ENST00000558342 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
AC105339.2-201ENST00000558342 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
AC105339.2-201ENST00000558342 IFNLR1Q8IU57 520 aaPredicted RBP13.47□□□□□ -0.25
AC105339.2-201ENST00000558342 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
AC105339.2-201ENST00000558342 LHX8Q68G74 356 aa13.45□□□□□ -0.26
AC105339.2-201ENST00000558342 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
AC105339.2-201ENST00000558342 PKD2Q13563 968 aa13.33□□□□□ -0.28
AC105339.2-201ENST00000558342 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
AC105339.2-201ENST00000558342 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
AC105339.2-201ENST00000558342 ZRANB1Q9UGI0 708 aa13.26□□□□□ -0.29
AC105339.2-201ENST00000558342 CLCN6P51797 869 aa13.25□□□□□ -0.29
AC105339.2-201ENST00000558342 STAG3Q9UJ98 1225 aa13.24□□□□□ -0.29
AC105339.2-201ENST00000558342 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms