RNA–Protein interactions for RNA: ENST00000558226.1

AC048383.1-201, humanhuman

TSL 4 BASIC

Gene AC048383.1, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048383.1-201ENST00000558226 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
AC048383.1-201ENST00000558226 CCDC180Q9P1Z9 1646 aa14.86□□□□□ -0.03
AC048383.1-201ENST00000558226 ZCCHC6Q5VYS8 1495 aaKnown RBP14.75□□□□□ -0.05
AC048383.1-201ENST00000558226 SHROOM4Q9ULL8 1493 aa14.69□□□□□ -0.06
AC048383.1-201ENST00000558226 SUPT5HO00267 1087 aaKnown RBP14.46□□□□□ -0.09
AC048383.1-201ENST00000558226 DCAF1Q9Y4B6 1507 aa14.4□□□□□ -0.1
AC048383.1-201ENST00000558226 DCAF8L2P0C7V8 631 aa14.21□□□□□ -0.13
AC048383.1-201ENST00000558226 CHIC1Q5VXU3 224 aa14.18□□□□□ -0.14
AC048383.1-201ENST00000558226 MYO15BQ96JP2 1530 aa14.07□□□□□ -0.16
AC048383.1-201ENST00000558226 ABCC9O60706 1549 aa13.93□□□□□ -0.18
AC048383.1-201ENST00000558226 HRCP23327 699 aa13.87□□□□□ -0.19
AC048383.1-201ENST00000558226 SCRIBQ14160 1630 aa13.78□□□□□ -0.2
AC048383.1-201ENST00000558226 RSF1Q96T23 1441 aaPredicted RBP13.77□□□□□ -0.21
AC048383.1-201ENST00000558226 NACADO15069 1562 aa13.71□□□□□ -0.21
AC048383.1-201ENST00000558226 PCGF6Q9BYE7 350 aa13.71□□□□□ -0.21
AC048383.1-201ENST00000558226 RB1CC1Q8TDY2 1594 aa13.68□□□□□ -0.22
AC048383.1-201ENST00000558226 LOC105371045A0A1W2PR82 267 aa13.66□□□□□ -0.22
AC048383.1-201ENST00000558226 DNAJC5BQ9UF47 199 aa13.58□□□□□ -0.24
AC048383.1-201ENST00000558226 TRIM26Q12899 539 aaPredicted RBP13.57□□□□□ -0.24
AC048383.1-201ENST00000558226 TRIM41Q8WV44 630 aa13.54□□□□□ -0.24
AC048383.1-201ENST00000558226 CECR2Q9BXF3 1484 aa13.49□□□□□ -0.25
AC048383.1-201ENST00000558226 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
AC048383.1-201ENST00000558226 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
AC048383.1-201ENST00000558226 PPARGC1BQ86YN6 1023 aaKnown RBP13.41□□□□□ -0.26
AC048383.1-201ENST00000558226 BAZ1AQ9NRL2 1556 aaPredicted RBP13.41□□□□□ -0.26
AC048383.1-201ENST00000558226 WIZO95785 1651 aa13.39□□□□□ -0.27
AC048383.1-201ENST00000558226 FAM9AQ8IZU1 332 aaPredicted RBP13.32□□□□□ -0.28
AC048383.1-201ENST00000558226 EIF4G1Q04637 1599 aaKnown RBP13.32□□□□□ -0.28
AC048383.1-201ENST00000558226 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
AC048383.1-201ENST00000558226 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
AC048383.1-201ENST00000558226 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
AC048383.1-201ENST00000558226 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
AC048383.1-201ENST00000558226 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
AC048383.1-201ENST00000558226 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
AC048383.1-201ENST00000558226 EEA1Q15075 1411 aa13.12□□□□□ -0.31
AC048383.1-201ENST00000558226 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
AC048383.1-201ENST00000558226 WRNQ14191 1432 aaPredicted RBP eCLIP13.1□□□□□ -0.31
AC048383.1-201ENST00000558226 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
AC048383.1-201ENST00000558226 TNIKQ9UKE5 1360 aa13.06□□□□□ -0.32
AC048383.1-201ENST00000558226 PEG3Q9GZU2 1588 aa13.04□□□□□ -0.32
AC048383.1-201ENST00000558226 BICRAQ9NZM4 1560 aa13.02□□□□□ -0.33
AC048383.1-201ENST00000558226 CEP162Q5TB80 1403 aa13□□□□□ -0.33
AC048383.1-201ENST00000558226 SOGA1O94964 1423 aa12.99□□□□□ -0.33
AC048383.1-201ENST00000558226 CSRNP3Q8WYN3 585 aa12.99□□□□□ -0.33
AC048383.1-201ENST00000558226 GOLGA3Q08378 1498 aa12.96□□□□□ -0.34
AC048383.1-201ENST00000558226 CCER1Q8TC90 406 aaPredicted RBP12.94□□□□□ -0.34
AC048383.1-201ENST00000558226 RUSC2Q8N2Y8 1516 aa12.9□□□□□ -0.34
AC048383.1-201ENST00000558226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
AC048383.1-201ENST00000558226 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
AC048383.1-201ENST00000558226 KIF21BO75037 1637 aa12.88□□□□□ -0.35
AC048383.1-201ENST00000558226 UBTFP17480 764 aaKnown RBP12.88□□□□□ -0.35
AC048383.1-201ENST00000558226 ATAD2BQ9ULI0 1458 aa12.88□□□□□ -0.35
AC048383.1-201ENST00000558226 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
AC048383.1-201ENST00000558226 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
AC048383.1-201ENST00000558226 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
AC048383.1-201ENST00000558226 CLIP1P30622 1438 aa12.77□□□□□ -0.37
AC048383.1-201ENST00000558226 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
AC048383.1-201ENST00000558226 TOP2BQ02880 1626 aa12.74□□□□□ -0.37
AC048383.1-201ENST00000558226 VPS8Q8N3P4 1428 aa12.74□□□□□ -0.37
AC048383.1-201ENST00000558226 SCAF1Q9H7N4 1312 aaKnown RBP12.74□□□□□ -0.37
AC048383.1-201ENST00000558226 TTBK1Q5TCY1 1321 aaPredicted RBP12.72□□□□□ -0.37
AC048383.1-201ENST00000558226 DIEXFQ68CQ4 756 aaKnown RBP12.72□□□□□ -0.37
AC048383.1-201ENST00000558226 BIVM-ERCC5R4GMW8 1640 aa12.71□□□□□ -0.37
AC048383.1-201ENST00000558226 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
AC048383.1-201ENST00000558226 ACIN1Q9UKV3 1341 aaKnown RBP12.68□□□□□ -0.38
AC048383.1-201ENST00000558226 RAPGEF2Q9Y4G8 1499 aa12.68□□□□□ -0.38
AC048383.1-201ENST00000558226 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
AC048383.1-201ENST00000558226 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
AC048383.1-201ENST00000558226 APLP2Q06481 763 aa12.67□□□□□ -0.38
AC048383.1-201ENST00000558226 NCAPD3P42695 1498 aa12.66□□□□□ -0.38
AC048383.1-201ENST00000558226 CENPBP07199 599 aaPredicted RBP12.66□□□□□ -0.38
AC048383.1-201ENST00000558226 PRXQ9BXM0 1461 aa12.64□□□□□ -0.39
AC048383.1-201ENST00000558226 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
AC048383.1-201ENST00000558226 NEUROD1Q13562 356 aa12.58□□□□□ -0.4
AC048383.1-201ENST00000558226 KIF27Q86VH2 1401 aa12.56□□□□□ -0.4
AC048383.1-201ENST00000558226 ARAP1Q96P48 1450 aa12.56□□□□□ -0.4
AC048383.1-201ENST00000558226 CUX1P39880 1505 aa12.56□□□□□ -0.4
AC048383.1-201ENST00000558226 CLSPNQ9HAW4 1339 aa12.56□□□□□ -0.4
AC048383.1-201ENST00000558226 CFTRP13569 1480 aa12.55□□□□□ -0.4
AC048383.1-201ENST00000558226 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
AC048383.1-201ENST00000558226 RRBP1Q9P2E9 1410 aaKnown RBP12.47□□□□□ -0.41
AC048383.1-201ENST00000558226 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
AC048383.1-201ENST00000558226 RANGAP1P46060 587 aaPredicted RBP12.46□□□□□ -0.41
AC048383.1-201ENST00000558226 AEBP2Q6ZN18 517 aaPredicted RBP12.45□□□□□ -0.42
AC048383.1-201ENST00000558226 DHX57Q6P158 1386 aaKnown RBP12.44□□□□□ -0.42
AC048383.1-201ENST00000558226 CUX2O14529 1486 aa12.44□□□□□ -0.42
AC048383.1-201ENST00000558226 ARHGAP35Q9NRY4 1499 aa12.43□□□□□ -0.42
AC048383.1-201ENST00000558226 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
AC048383.1-201ENST00000558226 KANK4Q5T7N3 995 aaPredicted RBP12.41□□□□□ -0.42
AC048383.1-201ENST00000558226 MIER1Q8N108 512 aa12.4□□□□□ -0.42
AC048383.1-201ENST00000558226 CADPSQ9ULU8 1353 aa12.4□□□□□ -0.42
AC048383.1-201ENST00000558226 IGF1RP08069 1367 aa12.39□□□□□ -0.43
AC048383.1-201ENST00000558226 CCNB3Q8WWL7 1395 aa12.39□□□□□ -0.43
AC048383.1-201ENST00000558226 CARMIL1Q5VZK9 1371 aa12.34□□□□□ -0.43
AC048383.1-201ENST00000558226 TIAM1Q13009 1591 aa12.34□□□□□ -0.43
AC048383.1-201ENST00000558226 FGD5Q6ZNL6 1462 aa12.33□□□□□ -0.44
AC048383.1-201ENST00000558226 YTHDC1Q96MU7 727 aaKnown RBP12.31□□□□□ -0.44
AC048383.1-201ENST00000558226 FHAD1B1AJZ9 1412 aa12.3□□□□□ -0.44
AC048383.1-201ENST00000558226 LRRC9Q6ZRR7 1453 aa12.28□□□□□ -0.44
AC048383.1-201ENST00000558226 CFAP43Q8NDM7 1665 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms