RNA–Protein interactions for RNA: ENST00000558167.1

CRTC3-204, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 559 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-204ENST00000558167 AEBP2Q6ZN18 517 aaPredicted RBP27.95■■■□□ 2.06
CRTC3-204ENST00000558167 CHIC1Q5VXU3 224 aa26.42■■□□□ 1.82
CRTC3-204ENST00000558167 SENP3Q9H4L4 574 aaPredicted RBP23.9■■□□□ 1.42
CRTC3-204ENST00000558167 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
CRTC3-204ENST00000558167 FOXD1Q16676 465 aa22.27■■□□□ 1.16
CRTC3-204ENST00000558167 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
CRTC3-204ENST00000558167 MSH5O43196 834 aa20.93■□□□□ 0.94
CRTC3-204ENST00000558167 PIAS4Q8N2W9 510 aaPredicted RBP20.83■□□□□ 0.93
CRTC3-204ENST00000558167 PPP6R1Q9UPN7 881 aa20.71■□□□□ 0.91
CRTC3-204ENST00000558167 ADRA2BP18089 450 aa20.66■□□□□ 0.9
CRTC3-204ENST00000558167 POTEDQ86YR6 584 aa20.64■□□□□ 0.89
CRTC3-204ENST00000558167 MAPK8IP2Q13387 824 aaPredicted RBP19.02■□□□□ 0.64
CRTC3-204ENST00000558167 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
CRTC3-204ENST00000558167 DMRT2Q9Y5R5 561 aa18.92■□□□□ 0.62
CRTC3-204ENST00000558167 PPP4R3CPQ6ZMV5 832 aa18.45■□□□□ 0.54
CRTC3-204ENST00000558167 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
CRTC3-204ENST00000558167 HOXD11P31277 338 aaPredicted RBP18.15■□□□□ 0.5
CRTC3-204ENST00000558167 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
CRTC3-204ENST00000558167 CACNB1Q02641 598 aaPredicted RBP18.07■□□□□ 0.48
CRTC3-204ENST00000558167 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
CRTC3-204ENST00000558167 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
CRTC3-204ENST00000558167 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
CRTC3-204ENST00000558167 C1QBPQ07021 282 aaKnown RBP17.56■□□□□ 0.4
CRTC3-204ENST00000558167 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
CRTC3-204ENST00000558167 NPM3O75607 178 aaKnown RBP17.44■□□□□ 0.38
CRTC3-204ENST00000558167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.37■□□□□ 0.37
CRTC3-204ENST00000558167 KCNA4P22459 653 aa16.99■□□□□ 0.31
CRTC3-204ENST00000558167 U3KPZ7 1027 aaPredicted RBP16.93■□□□□ 0.3
CRTC3-204ENST00000558167 CAPN15O75808 1086 aa16.76■□□□□ 0.27
CRTC3-204ENST00000558167 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
CRTC3-204ENST00000558167 SLC4A2P04920 1241 aa16.67■□□□□ 0.26
CRTC3-204ENST00000558167 DSG3P32926 999 aa16.64■□□□□ 0.25
CRTC3-204ENST00000558167 APLP2Q06481 763 aa16.49■□□□□ 0.23
CRTC3-204ENST00000558167 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
CRTC3-204ENST00000558167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
CRTC3-204ENST00000558167 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
CRTC3-204ENST00000558167 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
CRTC3-204ENST00000558167 ABCB7O75027 752 aa16.36■□□□□ 0.21
CRTC3-204ENST00000558167 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
CRTC3-204ENST00000558167 POTEHQ6S545 545 aa16.17■□□□□ 0.18
CRTC3-204ENST00000558167 MYCNP04198 464 aaPredicted RBP16.15■□□□□ 0.18
CRTC3-204ENST00000558167 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
CRTC3-204ENST00000558167 POLA2Q14181 598 aa15.97■□□□□ 0.15
CRTC3-204ENST00000558167 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
CRTC3-204ENST00000558167 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
CRTC3-204ENST00000558167 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.12
CRTC3-204ENST00000558167 ZBTB12Q9Y330 459 aaPredicted RBP15.64■□□□□ 0.09
CRTC3-204ENST00000558167 CHRDL2Q6WN34 429 aa15.61■□□□□ 0.09
CRTC3-204ENST00000558167 ZBTB22O15209 634 aa15.6■□□□□ 0.09
CRTC3-204ENST00000558167 AKT1S1Q96B36 256 aa15.5■□□□□ 0.07
CRTC3-204ENST00000558167 OSCARQ8IYS5 282 aa15.47■□□□□ 0.07
CRTC3-204ENST00000558167 ATXN8OSP0DMR3 200 aa15.42■□□□□ 0.06
CRTC3-204ENST00000558167 REM2Q8IYK8 340 aaPredicted RBP15.36■□□□□ 0.05
CRTC3-204ENST00000558167 PITPNM1O00562 1244 aa15.21■□□□□ 0.03
CRTC3-204ENST00000558167 FBLN2P98095 1184 aa15.21■□□□□ 0.03
CRTC3-204ENST00000558167 PIP4P2Q8N4L2 257 aa15.21■□□□□ 0.03
CRTC3-204ENST00000558167 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
CRTC3-204ENST00000558167 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
CRTC3-204ENST00000558167 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
CRTC3-204ENST00000558167 SP7Q8TDD2 431 aaPredicted RBP15.09■□□□□ 0.01
CRTC3-204ENST00000558167 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 0
CRTC3-204ENST00000558167 MKRN4PQ13434 485 aaPredicted RBP15.03■□□□□ -0
CRTC3-204ENST00000558167 HAX1O00165 279 aa15□□□□□ -0.01
CRTC3-204ENST00000558167 ZNF692Q9BU19 519 aaPredicted RBP14.94□□□□□ -0.02
CRTC3-204ENST00000558167 CLEC11AQ9Y240 323 aa14.92□□□□□ -0.02
CRTC3-204ENST00000558167 SPDYE1Q8NFV5 336 aaPredicted RBP14.91□□□□□ -0.02
CRTC3-204ENST00000558167 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
CRTC3-204ENST00000558167 PRKAR2AP13861 404 aaKnown RBP14.83□□□□□ -0.04
CRTC3-204ENST00000558167 EVX2Q03828 476 aa14.75□□□□□ -0.05
CRTC3-204ENST00000558167 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
CRTC3-204ENST00000558167 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
CRTC3-204ENST00000558167 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
CRTC3-204ENST00000558167 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
CRTC3-204ENST00000558167 C19orf67A6NJJ6 358 aa14.6□□□□□ -0.07
CRTC3-204ENST00000558167 EHMT2Q96KQ7 1210 aa14.57□□□□□ -0.08
CRTC3-204ENST00000558167 GABBR2O75899 941 aa14.43□□□□□ -0.1
CRTC3-204ENST00000558167 FARP1Q9Y4F1 1045 aaPredicted RBP14.39□□□□□ -0.11
CRTC3-204ENST00000558167 CD44P16070 742 aaKnown RBP14.35□□□□□ -0.11
CRTC3-204ENST00000558167 SPDYE4A6NLX3 237 aa14.29□□□□□ -0.12
CRTC3-204ENST00000558167 STAG3Q9UJ98 1225 aa14.28□□□□□ -0.12
CRTC3-204ENST00000558167 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
CRTC3-204ENST00000558167 LHX8Q68G74 356 aa14.16□□□□□ -0.14
CRTC3-204ENST00000558167 CLCN6P51797 869 aa14.15□□□□□ -0.14
CRTC3-204ENST00000558167 ZRANB1Q9UGI0 708 aa14.13□□□□□ -0.15
CRTC3-204ENST00000558167 POTEIP0CG38 1075 aa14.1□□□□□ -0.15
CRTC3-204ENST00000558167 ZNF579Q8NAF0 562 aaKnown RBP14.09□□□□□ -0.15
CRTC3-204ENST00000558167 DCBLD2Q96PD2 775 aa14.06□□□□□ -0.16
CRTC3-204ENST00000558167 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
CRTC3-204ENST00000558167 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
CRTC3-204ENST00000558167 GALR2O43603 387 aaPredicted RBP13.94□□□□□ -0.18
CRTC3-204ENST00000558167 MNX1P50219 401 aaPredicted RBP13.92□□□□□ -0.18
CRTC3-204ENST00000558167 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
CRTC3-204ENST00000558167 PROM2Q8N271 834 aa13.86□□□□□ -0.19
CRTC3-204ENST00000558167 TSPYL2Q9H2G4 693 aaPredicted RBP13.73□□□□□ -0.21
CRTC3-204ENST00000558167 MS4A3Q96HJ5 214 aa13.71□□□□□ -0.21
CRTC3-204ENST00000558167 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
CRTC3-204ENST00000558167 PELP1Q8IZL8 1130 aaKnown RBP13.67□□□□□ -0.22
CRTC3-204ENST00000558167 MIER1Q8N108 512 aa13.67□□□□□ -0.22
CRTC3-204ENST00000558167 POTEB2H3BUK9 544 aa13.64□□□□□ -0.23
CRTC3-204ENST00000558167 ASTLQ6HA08 431 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 406.8 ms